CX292116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX292116 vs. ExPASy Swiss-Prot
Match: VATO_SCHPO (Probable V-type proton ATPase 20 kDa proteolipid subunit OS=Schizosaccharomyces pombe GN=vma16 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.835e-22 Identity = 50/105 (47.62%), Postives = 67/105 (63.81%), Query Frame = 1 Query: 1 FCEXXXXXXXXXXXXLQTKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQAS 315 FCE K+ + + Y G+A+F GI VG NL+CG+CVGI GSS AL+DAQ++SLFVK+LV+EIFGS LGLFG+IVG+++ +AS Sbjct: 92 FCEVVAIYSLIIAIVFSAKINDINPAGFYTKSHYYTGFALFWGGITVGLCNLICGVCVGITGSSAALADAQDASLFVKVLVVEIFGSVLGLFGLIVGLLIGGKAS 196
BLAST of CX292116 vs. ExPASy Swiss-Prot
Match: VATO_YEAST (V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae GN=PPA1 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.972e-22 Identity = 51/105 (48.57%), Postives = 71/105 (67.62%), Query Frame = 1 Query: 1 FCEXXXXXXXXXXXXLQTKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQAS 315 FCE +KL A +Y+ +L GY++F +GI VG +NL+CG+ VGI G++ A+SDA +S+LFVKILVIEIFGS LGL G+IVG++M+ +AS Sbjct: 106 FCEVVAIYGLIIAIVFSSKLTVATAENMYSKSNLYTGYSLFWAGITVGASNLICGIAVGITGATAAISDAADSALFVKILVIEIFGSILGLLGLIVGLLMAGKAS 210
BLAST of CX292116 vs. ExPASy Swiss-Prot
Match: VATO_MOUSE (V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus GN=Atp6v0b PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.007e-20 Identity = 50/105 (47.62%), Postives = 69/105 (65.71%), Query Frame = 1 Query: 1 FCEXXXXXXXXXXXXLQTKLESVPASQIYA--PESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 309 FCE + E A++ A + AGY++F +G+ VG +NL CG+CVGI+GS AL+DAQN SLFVKIL++EIFGSA+GLFGVIV I+ +++ Sbjct: 96 FCEAVAIYGIIMAIVISNMAEPFSATEPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200
BLAST of CX292116 vs. ExPASy Swiss-Prot
Match: VATO_HUMAN (V-type proton ATPase 21 kDa proteolipid subunit OS=Homo sapiens GN=ATP6V0B PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.315e-20 Identity = 44/68 (64.71%), Postives = 59/68 (86.76%), Query Frame = 1 Query: 106 AGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 309 AGY++F +G+ VG +NL CG+CVGI+GS AL+DAQN SLFVKIL++EIFGSA+GLFGVIV I+ +++ Sbjct: 133 AGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200
BLAST of CX292116 vs. ExPASy Swiss-Prot
Match: VATO_BOVIN (V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus GN=ATP6V0B PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.315e-20 Identity = 44/68 (64.71%), Postives = 59/68 (86.76%), Query Frame = 1 Query: 106 AGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 309 AGY++F +G+ VG +NL CG+CVGI+GS AL+DAQN SLFVKIL++EIFGSA+GLFGVIV I+ +++ Sbjct: 133 AGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200
BLAST of CX292116 vs. ExPASy Swiss-Prot
Match: VATL_ORYSJ (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. japonica GN=VATP-P1 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 9.445e-11 Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 91 PESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQA 312 P L GYA +SG+ G A L G+ +GI+G + ++AQ LFV +++I IF AL L+G+IVGII+S++A Sbjct: 86 PYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 159
BLAST of CX292116 vs. ExPASy Swiss-Prot
Match: VATL_ORYSI (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. indica GN=VATP-P1 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 9.445e-11 Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 91 PESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQA 312 P L GYA +SG+ G A L G+ +GI+G + ++AQ LFV +++I IF AL L+G+IVGII+S++A Sbjct: 86 PYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 159
BLAST of CX292116 vs. ExPASy Swiss-Prot
Match: VATL_MAIZE (V-type proton ATPase 16 kDa proteolipid subunit (Fragment) OS=Zea mays PE=2 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 9.445e-11 Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 91 PESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQA 312 P L GYA +SG+ G A L G+ +GI+G + ++AQ LFV +++I IF AL L+G+IVGII+S++A Sbjct: 30 PYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 103
BLAST of CX292116 vs. ExPASy Swiss-Prot
Match: VATL_AVESA (V-type proton ATPase 16 kDa proteolipid subunit OS=Avena sativa GN=VATP-P1 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 9.445e-11 Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 91 PESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQA 312 P L GYA +SG+ G A L G+ +GI+G + ++AQ LFV +++I IF AL L+G+IVGII+S++A Sbjct: 86 PYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 159 The following BLAST results are available for this feature:
BLAST of CX292116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX292116 ID=CX292116; Name=CX292116; organism=Citrus clementina; type=EST; length=501bpback to top |