CX292130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX292130 vs. ExPASy Swiss-Prot
Match: HMCS_ARATH (Hydroxymethylglutaryl-CoA synthase OS=Arabidopsis thaliana GN=HMGS PE=2 SV=2) HSP 1 Score: 238.81 bits (608), Expect = 1.477e-62 Identity = 115/128 (89.84%), Postives = 122/128 (95.31%), Query Frame = 3 Query: 201 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 584 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQ+C+AFC+E+EDVISMS AVT+L EKYKIDP QIGRLEVGSETVIDKSKSIKTFLMQ+FEK GNTD+EGVDSTNACYGGTAAL NCV Sbjct: 1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNAVTSLFEKYKIDPNQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCV 128
BLAST of CX292130 vs. ExPASy Swiss-Prot
Match: HMCSA_DICDI (Hydroxymethylglutaryl-CoA synthase A OS=Dictyostelium discoideum GN=hgsA PE=1 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 1.878e-41 Identity = 78/129 (60.47%), Postives = 100/129 (77.52%), Query Frame = 3 Query: 198 TMAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 584 T +N+GI +++YFP T V QE LE DG S+GKYT+GLGQ MAFC + ED+ S+SL AV NL++K+ +DP IGRLEVG+ETVIDKSKS+KT LM +F K GNT I+G+D+ NACYGGT+AL N + Sbjct: 2 TKPENIGIHGIEVYFPSTYVAQEDLEKFDGVSQGKYTLGLGQTNMAFCGDREDIYSLSLNAVNNLMDKFNVDPNSIGRLEVGTETVIDKSKSVKTVLMDLFAKHGNTSIDGIDTINACYGGTSALHNAL 130
BLAST of CX292130 vs. ExPASy Swiss-Prot
Match: HMCS1_CHICK (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Gallus gallus GN=HMGCS1 PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 3.541e-40 Identity = 78/126 (61.90%), Postives = 98/126 (77.78%), Query Frame = 3 Query: 207 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 584 K+VGI+A++IYFP V Q LE +DG GKYTIGLGQ M FCS+ ED+ S+ LT V L+E+ + IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTD+EG+D+TNACYGGTAALFN + Sbjct: 15 KDVGIVALEIYFPSQYVDQTELEKYDGVDAGKYTIGLGQSKMGFCSDREDINSLCLTVVQKLMERNSLSYDCIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAI 140
BLAST of CX292130 vs. ExPASy Swiss-Prot
Match: HMCS1_PONAB (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Pongo abelii GN=HMGCS1 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 6.040e-40 Identity = 78/126 (61.90%), Postives = 100/126 (79.37%), Query Frame = 3 Query: 207 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 584 K+VGI+A++IYFP V Q LE +DG + GKYTIGLGQ M FC++ ED+ S+ +T V NL+E+ + IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTDIEG+D+TNACYGGTAA+FN V Sbjct: 15 KDVGIVALEIYFPSQYVDQAELEKYDGVAAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAV 140
BLAST of CX292130 vs. ExPASy Swiss-Prot
Match: HMCS1_HUMAN (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Homo sapiens GN=HMGCS1 PE=1 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 7.888e-40 Identity = 78/126 (61.90%), Postives = 99/126 (78.57%), Query Frame = 3 Query: 207 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 584 K+VGI+A++IYFP V Q LE +DG GKYTIGLGQ M FC++ ED+ S+ +T V NL+E+ + IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTDIEG+D+TNACYGGTAA+FN V Sbjct: 15 KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAV 140
BLAST of CX292130 vs. ExPASy Swiss-Prot
Match: HMCS1_CRIGR (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Cricetulus griseus GN=HMGCS1 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.346e-39 Identity = 78/126 (61.90%), Postives = 99/126 (78.57%), Query Frame = 3 Query: 207 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 584 K+VGI+A++IYFP V Q LE +DG GKYTIGLGQ M FC++ ED+ S+ LT V NL+E+ + IGRLEVG+ET+IDKSKS+K+ LMQ+FE+ GNTDIEG+D+TNACYGGTAA+FN V Sbjct: 15 KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVVQNLMERNSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAV 140
BLAST of CX292130 vs. ExPASy Swiss-Prot
Match: HMCS1_MOUSE (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Mus musculus GN=Hmgcs1 PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.295e-39 Identity = 77/126 (61.11%), Postives = 99/126 (78.57%), Query Frame = 3 Query: 207 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 584 K+VGI+A++IYFP V Q LE +DG GKYTIGLGQ M FC++ ED+ S+ LT V L+E++ + IGRLEVG+ET+IDKSKS+K+ LMQ+FE+ GNTDIEG+D+TNACYGGTAA+FN V Sbjct: 15 KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVVQKLMERHSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAV 140
BLAST of CX292130 vs. ExPASy Swiss-Prot
Match: HMCS1_RAT (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Rattus norvegicus GN=Hmgcs1 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 6.678e-39 Identity = 77/126 (61.11%), Postives = 98/126 (77.78%), Query Frame = 3 Query: 207 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 584 K+VGI+A++IYFP V Q LE +DG GKYTIGLGQ M FC++ ED+ S+ LT V L+E+ + IGRLEVG+ET+IDKSKS+K+ LMQ+FE+ GNTDIEG+D+TNACYGGTAA+FN V Sbjct: 15 KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVVQKLMERNSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAV 140
BLAST of CX292130 vs. ExPASy Swiss-Prot
Match: HMCSB_DICDI (Hydroxymethylglutaryl-CoA synthase B OS=Dictyostelium discoideum GN=hgsB PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 5.653e-38 Identity = 72/124 (58.06%), Postives = 98/124 (79.03%), Query Frame = 3 Query: 207 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFN 578 K++GI A+DIYFP T V Q L+ +D S GKYTIGLGQ M+F + ED++SM++T+V ++ KY ID + IGRLEVG+ET+IDKSKS+K+ +M +F+++GNT +EGVD+ NACYGGT ALFN Sbjct: 5 KDIGICAIDIYFPQTYVNQSELKKYDKVSNGKYTIGLGQTNMSFVGDREDIVSMAMTSVKMMMSKYSIDYQSIGRLEVGTETIIDKSKSVKSSIMSLFQEYGNTSLEGVDTLNACYGGTNALFN 128
BLAST of CX292130 vs. ExPASy Swiss-Prot
Match: HMCS_YEAST (Hydroxymethylglutaryl-CoA synthase OS=Saccharomyces cerevisiae GN=ERG13 PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.645e-37 Identity = 76/128 (59.38%), Postives = 97/128 (75.78%), Query Frame = 3 Query: 195 KTMAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFN 578 KT +NVGI + IY P CV Q LE DG S+GKYTIGLGQ M+F ++ ED+ SMSLT ++ L++ Y ID +IGRLEVG+ET+IDKSKS+K+ LMQ+F + NTD+EG+D+ NACYGGT ALFN Sbjct: 43 KTRPQNVGIKGIQIYIPTQCVNQSELEKFDGVSQGKYTIGLGQTNMSFVNDREDIYSMSLTVLSKLIKSYNIDTNKIGRLEVGTETLIDKSKSVKSVLMQLFGE--NTDVEGIDTLNACYGGTNALFN 168 The following BLAST results are available for this feature:
BLAST of CX292130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292130 ID=CX292130; Name=CX292130; organism=Citrus clementina; type=EST; length=585bpback to top |