CX292148
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_ARATH (Riboflavin biosynthesis protein ribBA, chloroplastic OS=Arabidopsis thaliana GN=RIBBA PE=2 SV=2) HSP 1 Score: 431.024 bits (1107), Expect = 2.908e-120 Identity = 209/231 (90.48%), Postives = 221/231 (95.67%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EASVDL VLAG DP VLCE+VDDDGSMARLPKLREFA NLK++SIADLIRYRRKRDKLV+R+SAARIPTMWGPFTAYCYRSILDGIEHIAMVKG+IGDGQDILVRVHSECLTGDIFGSARCDCG+QLAL+MQQIEA GRGVLVYLRGHEGRGIGLGHKLRAYNLQD GRDTVEANEELGLPVDSREYGIGAQ++RDLGVRTMKLMTNNP+KYVGLKGYGLA+ GRVPL Sbjct: 272 EASVDLTVLAGLDPVGVLCEIVDDDGSMARLPKLREFAAENNLKVVSIADLIRYRRKRDKLVERASAARIPTMWGPFTAYCYRSILDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALSMQQIEATGRGVLVYLRGHEGRGIGLGHKLRAYNLQDAGRDTVEANEELGLPVDSREYGIGAQIIRDLGVRTMKLMTNNPAKYVGLKGYGLAIVGRVPL 502
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_NOCFA (Riboflavin biosynthesis protein ribBA OS=Nocardia farcinica GN=ribBA PE=3 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 7.003e-82 Identity = 146/233 (62.66%), Postives = 186/233 (79.83%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVD--DDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EA+VDLA +AG PA V+CE+V D+G MAR +LR FA +L +ISIAD+I +RRK +K V R + ARIPT G FTA Y+SI D +EH+A+V+GDIGDG+D+LVRVHSECLTGD+FGS RCDCG QL A++ ++ GRGV++Y+RGHEGRGIGL HKL+AY LQD GRDTV+AN +LGLP D+R+YG GAQ+L DLG+R+M+L+TNNP+K VGL GYGL + RVP+ Sbjct: 146 EAAVDLARMAGLRPAGVICEIVSQKDEGHMARTEELRVFADDHDLALISIADMIAWRRKHEKQVVRVAEARIPTAHGAFTAVGYQSIYDDVEHVALVRGDIGDGEDVLVRVHSECLTGDVFGSLRCDCGPQLDAALEMVDQEGRGVVLYMRGHEGRGIGLMHKLQAYQLQDSGRDTVDANLDLGLPADARDYGTGAQILVDLGIRSMRLLTNNPAKRVGLDGYGLTITERVPM 378
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_SALAI (Riboflavin biosynthesis protein ribBA OS=Salinispora arenicola (strain CNS-205) GN=ribBA PE=3 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 7.742e-81 Identity = 143/231 (61.90%), Postives = 181/231 (78.35%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EA++DL LAG PA VLCE+V+DDG+M R+P L F +L +I+IADL+ YRR+ +K V+ + AR+PT G F A+ YRS D EH+A+V GD+GDG+D+LVRVHSECLTGD+ GS RCDCG QL A+ Q+ GRGV++Y+RGHEGRGIGL HKL+AY LQD GRDTV+AN +LGLP D+R+YG GAQ+L DLGVR+M+L+TNNP+K GL+GYGL VAGRV L Sbjct: 146 EAAIDLTRLAGLRPAGVLCELVNDDGTMMRVPDLERFCAEHSLVLITIADLVAYRRRTEKQVELVAEARMPTRHGVFRAFGYRSDYDSAEHVALVMGDLGDGRDVLVRVHSECLTGDVLGSLRCDCGPQLNAALDQVAREGRGVVLYVRGHEGRGIGLLHKLQAYQLQDTGRDTVDANLDLGLPADARDYGTGAQILYDLGVRSMRLLTNNPAKRAGLEGYGLTVAGRVEL 376
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCA9 (Riboflavin biosynthesis protein ribBA OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=ribBA PE=3 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 8.560e-80 Identity = 148/237 (62.45%), Postives = 183/237 (77.22%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVD--DDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDI----GDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EASVDLA LAG PAAV+CE+V D+G+MA+ +LR FA NL ++SIADLI +RRK +K V R + ARIPT G F A Y SI D +EH+A+V GDI GDG D+LVRVHSECLTGD+FGS RCDCG QL AM+ + GRG+++Y+RGHEGRGIGL HKL+AY LQD G DTV+AN +LGLP D+R+YG+GAQ+L DLGV++M+L+TNNP+K VGL GYGL + RVPL Sbjct: 146 EASVDLAKLAGLRPAAVICEIVSQKDEGAMAQTEELRVFADEHNLALVSIADLIEWRRKHEKHVQRIAEARIPTQHGEFRAVGYTSIYDDVEHVALVLGDISGPDGDGNDVLVRVHSECLTGDVFGSRRCDCGPQLDAAMEMVAKEGRGIVLYMRGHEGRGIGLMHKLQAYQLQDAGEDTVDANLKLGLPADARDYGLGAQILVDLGVKSMRLLTNNPAKRVGLDGYGLHIIERVPL 382
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_SALTO (Riboflavin biosynthesis protein ribBA OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=ribBA PE=3 SV=1) HSP 1 Score: 294.278 bits (752), Expect = 4.248e-79 Identity = 142/231 (61.47%), Postives = 176/231 (76.19%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EA+ DL LAG PA VLCE+V+DDG+M R+P L F +L +++IADL+ YRR+ +K V+ + AR+PT G F YR D EH+A+V GD+GDG+D+LVR HSECLTGD+FGS RCDCG QL AM+ + GRGV++Y+RGHEGRGIGL HKLRAY LQD GRDTVEAN ELGLPVD+R+YG GAQ+L DLGVR+M+L+TNNP+K GL+GYGL V RV L Sbjct: 146 EAATDLTRLAGLRPAGVLCELVNDDGTMMRVPDLERFCAEHSLVLVTIADLVMYRRRTEKQVELVAEARLPTRHGDFRVAGYRGDYDSAEHVALVMGDLGDGRDVLVRAHSECLTGDVFGSLRCDCGLQLDTAMELVAKEGRGVVLYIRGHEGRGIGLLHKLRAYQLQDKGRDTVEANLELGLPVDARDYGTGAQVLYDLGVRSMRLLTNNPAKRAGLEGYGLTVTERVAL 376
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_SYNWW (Riboflavin biosynthesis protein ribBA OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=ribBA PE=3 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 7.247e-79 Identity = 146/231 (63.20%), Postives = 183/231 (79.22%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 E S+DL LAG PAAV+CEV+++DG+MARLP+L EFA++ NLK+ SIADLI YRR+++KLV R + A++PTM+G F A Y S+LD HIA+VKG+ + + ILVRVHSECLTGD+FGS RCDCG+QL AM I + G+GVL+Y+R EGRGIGL +K++AY LQD+GRDTVEAN ELG P D R+YGIGAQ+L DLGVR M+LMTNNP K GL+GYGL V RV + Sbjct: 143 EGSIDLTRLAGLYPAAVICEVMNEDGTMARLPQLLEFARQHNLKLASIADLIEYRRRKEKLVVRVTDAQLPTMYGDFVAVAYESLLDNKGHIALVKGEWEEDEPILVRVHSECLTGDVFGSRRCDCGEQLETAMSMIASEGKGVLLYMR-QEGRGIGLLNKIKAYKLQDNGRDTVEANLELGFPADLRDYGIGAQILVDLGVRKMRLMTNNPKKIRGLEGYGLEVVERVAI 372
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_RHOSR (Riboflavin biosynthesis protein ribBA OS=Rhodococcus sp. (strain RHA1) GN=ribBA PE=3 SV=1) HSP 1 Score: 290.812 bits (743), Expect = 4.697e-78 Identity = 145/237 (61.18%), Postives = 182/237 (76.79%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVD--DDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDI----GDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EA+VDLA +A PA V+CE+V D+G MA+ +LR FA NL +ISIADLI +RRK +K V+R ++ARIPT G FTA YRSI D +EH+A+V+GD+ GDG D+LVRVHSECLTGD+FGS RCDCG QL A+ + GRGV++Y+RGHEGRGIGL HKL+AY LQD G DTV+AN ELGLP D+R+YGIGAQ+L DLG+ +M+L+TNNP+K VGL GYGL + RV + Sbjct: 146 EAAVDLARMADLRPAGVICEIVSQKDEGHMAQTDELRVFADDHNLALISIADLIAWRRKHEKHVERVASARIPTRHGEFTAVGYRSIYDDVEHVALVRGDLPGPDGDGSDVLVRVHSECLTGDVFGSLRCDCGPQLDAALDMVAQEGRGVVLYMRGHEGRGIGLMHKLQAYQLQDAGSDTVDANLELGLPADARDYGIGAQILVDLGISSMRLLTNNPAKRVGLDGYGLQITERVSM 382
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_RHOE4 (Riboflavin biosynthesis protein ribBA OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=ribBA PE=3 SV=1) HSP 1 Score: 290.812 bits (743), Expect = 4.697e-78 Identity = 146/237 (61.60%), Postives = 181/237 (76.37%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVD--DDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDI----GDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EA+VDLA +A PA V+CE+V D+G+MA+ +LR FA NL +ISIADLI +RRK +K V R + ARIPT G FTA Y SI D +EH+A+V+GDI GDG D+LVRVHSECLTGD+FGS RCDCG QL A+ + GRGV++Y+RGHEGRGIGL HKL+AY LQD G DTV+AN ELGLP D+R+YGIGAQ+L DLG+ +M+L+TNNP+K VGL GYGL + RVP+ Sbjct: 146 EAAVDLARMADLRPAGVICEIVSQKDEGAMAQTDELRVFADEHNLALISIADLIAWRRKHEKHVLRIAEARIPTRHGEFTAVGYTSIYDEVEHVALVRGDIAGPDGDGSDVLVRVHSECLTGDVFGSLRCDCGPQLDAALDMVAQEGRGVVLYMRGHEGRGIGLMHKLQAYQLQDAGSDTVDANLELGLPADARDYGIGAQILVDLGISSMRLLTNNPAKRVGLDGYGLQITDRVPM 382
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_BACSK (Riboflavin biosynthesis protein ribBA OS=Bacillus clausii (strain KSM-K16) GN=ribBA PE=3 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 1.367e-77 Identity = 141/231 (61.04%), Postives = 179/231 (77.49%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EA+VD A L G PA V+CEV+++DGSMAR+P+LR A + NL +++I DLI YRRK +K+V R A +PT +G F A Y + +DG E +A+VKGD+G+G+ +LVRVHSECLTGD+FGS RCDCG QL A++QIEA GRGVL+Y++ EGRGIGL +K RAY LQ++G DTVEANE LG P D REYGIGAQ+LRDLG+R M+L+TNNP K GL+GY L + RVPL Sbjct: 143 EAAVDFAKLCGAKPAGVICEVMNEDGSMARVPELRIIADQHNLPLVTIKDLIAYRRKTEKVVTREVAISLPTEYGDFKAVGYTNTIDGKESVALVKGDVGNGEPVLVRVHSECLTGDVFGSKRCDCGPQLHAALKQIEAEGRGVLLYMK-QEGRGIGLINKFRAYKLQEEGYDTVEANERLGFPADLREYGIGAQILRDLGIRDMRLLTNNPRKIAGLEGYDLNIVERVPL 372
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_AQUAE (Riboflavin biosynthesis protein ribBA OS=Aquifex aeolicus GN=ribBA PE=3 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 1.785e-77 Identity = 140/231 (60.61%), Postives = 178/231 (77.06%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EASVDLA LAG PA V+CE++ DDG+MAR+P L EFAK+ NLKII+IADLI+YR +R+ LV++ ++A +PT WG F + YR L G E +A+ G+ + + +LVRVHSECLTGD+F S RCDC QL A++ I G+GVLVY+ GHEGRGIG+ +K++AY LQ+ G DTVEANE+LG P D R+YGIGAQ+LRDLGVR MKLMTNNP K V L+G+GL V RVP+ Sbjct: 153 EASVDLARLAGLYPAGVICEIMKDDGTMARVPDLMEFAKKHNLKIITIADLIKYRLRRETLVEKVASAHLPTPWGVFKIHAYRHKLTGEEQVALTMGEWKEDEPVLVRVHSECLTGDVFRSFRCDCRPQLEKALEMIAKEGKGVLVYILGHEGRGIGIANKIKAYELQEKGYDTVEANEKLGYPPDLRDYGIGAQILRDLGVRKMKLMTNNPRKIVALEGFGLEVVERVPI 383 The following BLAST results are available for this feature:
BLAST of CX292148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 285
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292148 ID=CX292148; Name=CX292148; organism=Citrus clementina; type=EST; length=702bpback to top |