CX292182

Overview
NameCX292182
Unique NameCX292182
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length552
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292182 vs. ExPASy Swiss-Prot
Match: ADT1_ARATH (ADP,ATP carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=ANT1 PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 1.990e-34
Identity = 75/86 (87.21%), Postives = 75/86 (87.21%), Query Frame = 1
Query:    1 ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXXYDKLQLIVFGKKYGSGGA 258
            ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAF QILKNEGAKSLFKGAGANILR          YDKLQLIVFGKKYGSGGA
Sbjct:  296 ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFKQILKNEGAKSLFKGAGANILRAVAGAGVLSGYDKLQLIVFGKKYGSGGA 381          
BLAST of CX292182 vs. ExPASy Swiss-Prot
Match: ADT2_ARATH (ADP,ATP carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=ANT2 PE=1 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 2.200e-33
Identity = 73/86 (84.88%), Postives = 74/86 (86.05%), Query Frame = 1
Query:    1 ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXXYDKLQLIVFGKKYGSGGA 258
            ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSS DAFSQI+K EGAKSLFKGAGANILR          YDKLQLIVFGKKYGSGGA
Sbjct:  300 ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQIVKKEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVFGKKYGSGGA 385          
BLAST of CX292182 vs. ExPASy Swiss-Prot
Match: ADT_ORYSJ (ADP,ATP carrier protein, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0718900 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.753e-33
Identity = 71/86 (82.56%), Postives = 75/86 (87.21%), Query Frame = 1
Query:    1 ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXXYDKLQLIVFGKKYGSGGA 258
            ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSS+DAFSQILKNEGAKSLFKGAGANILR          YD+LQ++ FGKKYGSGGA
Sbjct:  297 ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLSGYDQLQILFFGKKYGSGGA 382          
BLAST of CX292182 vs. ExPASy Swiss-Prot
Match: ADT1_GOSHI (ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 6.402e-33
Identity = 72/86 (83.72%), Postives = 74/86 (86.05%), Query Frame = 1
Query:    1 ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXXYDKLQLIVFGKKYGSGGA 258
            ITNGA LASYPIDTVRRRMMMTSG+AVKYKSSLDAFSQILKNEG KSLFKGAG+NILR          YDKLQLIVFGKKYGSGGA
Sbjct:  301 ITNGAALASYPIDTVRRRMMMTSGKAVKYKSSLDAFSQILKNEGGKSLFKGAGSNILRAIAGAGVLAGYDKLQLIVFGKKYGSGGA 386          
BLAST of CX292182 vs. ExPASy Swiss-Prot
Match: ADT2_SOLTU (ADP,ATP carrier protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.426e-32
Identity = 70/85 (82.35%), Postives = 73/85 (85.88%), Query Frame = 1
Query:    1 ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXXYDKLQLIVFGKKYGSGG 255
            ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSS DAF+QILKNEG KSLFKGAGAN+LR          YDKLQ+IVFGKKYGSGG
Sbjct:  301 ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFNQILKNEGPKSLFKGAGANVLRAVAGAGVLAGYDKLQVIVFGKKYGSGG 385          
BLAST of CX292182 vs. ExPASy Swiss-Prot
Match: ADT1_WHEAT (ADP,ATP carrier protein 1, mitochondrial OS=Triticum aestivum GN=ANT-G1 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.177e-32
Identity = 70/86 (81.40%), Postives = 73/86 (84.88%), Query Frame = 1
Query:    1 ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXXYDKLQLIVFGKKYGSGGA 258
            ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAF QILK EGAKSLFKGAGANILR          YD+LQ++ FGKKYGSGGA
Sbjct:  246 ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQILKKEGAKSLFKGAGANILRAIAGAGVLSGYDQLQILFFGKKYGSGGA 331          
BLAST of CX292182 vs. ExPASy Swiss-Prot
Match: ADT1_SOLTU (ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.177e-32
Identity = 70/86 (81.40%), Postives = 74/86 (86.05%), Query Frame = 1
Query:    1 ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXXYDKLQLIVFGKKYGSGGA 258
            ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQI+KNEG KSLFKGAGANILR          YDKLQ++V GKK+GSGGA
Sbjct:  301 ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQIVKNEGPKSLFKGAGANILRAVAGAGVLAGYDKLQVLVLGKKFGSGGA 386          
BLAST of CX292182 vs. ExPASy Swiss-Prot
Match: ADT2_MAIZE (ADP,ATP carrier protein 2, mitochondrial OS=Zea mays GN=ANT2 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.207e-31
Identity = 69/86 (80.23%), Postives = 72/86 (83.72%), Query Frame = 1
Query:    1 ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXXYDKLQLIVFGKKYGSGGA 258
            ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAF QILK EG KSLFKGAGANILR          YD+LQ++ FGKKYGSGGA
Sbjct:  302 ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQILKKEGPKSLFKGAGANILRAIAGAGVLSGYDQLQILFFGKKYGSGGA 387          
BLAST of CX292182 vs. ExPASy Swiss-Prot
Match: ADT1_MAIZE (ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 1.207e-31
Identity = 69/86 (80.23%), Postives = 72/86 (83.72%), Query Frame = 1
Query:    1 ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXXYDKLQLIVFGKKYGSGGA 258
            ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAF QILK EG KSLFKGAGANILR          YD+LQ++ FGKKYGSGGA
Sbjct:  302 ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQILKKEGPKSLFKGAGANILRAIAGAGVLSGYDQLQILFFGKKYGSGGA 387          
BLAST of CX292182 vs. ExPASy Swiss-Prot
Match: ADT2_WHEAT (ADP,ATP carrier protein 2, mitochondrial OS=Triticum aestivum GN=ANT-G2 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.022e-30
Identity = 68/86 (79.07%), Postives = 71/86 (82.56%), Query Frame = 1
Query:    1 ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXXYDKLQLIVFGKKYGSGGA 258
            ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAF QI   EGAKSLFKGAGANILR          YD+LQ++ FGKKYGSGGA
Sbjct:  246 ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQIPAKEGAKSLFKGAGANILRAIAGAGVLSGYDQLQILFFGKKYGSGGA 331          
The following BLAST results are available for this feature:
BLAST of CX292182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
ADT1_ARATH1.990e-3487.21ADP,ATP carrier protein 1, mitochondrial OS=Arabid... [more]
ADT2_ARATH2.200e-3384.88ADP,ATP carrier protein 2, mitochondrial OS=Arabid... [more]
ADT_ORYSJ3.753e-3382.56ADP,ATP carrier protein, mitochondrial OS=Oryza sa... [more]
ADT1_GOSHI6.402e-3383.72ADP,ATP carrier protein 1, mitochondrial OS=Gossyp... [more]
ADT2_SOLTU1.426e-3282.35ADP,ATP carrier protein, mitochondrial (Fragment) ... [more]
ADT1_WHEAT3.177e-3281.40ADP,ATP carrier protein 1, mitochondrial OS=Tritic... [more]
ADT1_SOLTU3.177e-3281.40ADP,ATP carrier protein, mitochondrial OS=Solanum ... [more]
ADT2_MAIZE1.207e-3180.23ADP,ATP carrier protein 2, mitochondrial OS=Zea ma... [more]
ADT1_MAIZE1.207e-3180.23ADP,ATP carrier protein 1, mitochondrial OS=Zea ma... [more]
ADT2_WHEAT1.022e-3079.07ADP,ATP carrier protein 2, mitochondrial OS=Tritic... [more]

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Properties
Property NameValue
Genbank descriptionC04011E03SK FlavFr1 Citrus clementina cDNA clone C04011E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292182 ID=CX292182; Name=CX292182; organism=Citrus clementina; type=EST; length=552bp
ATCACTAATGGTGCTGGTCTTGCTTCCTACCCAATTGACACTGTCCGTAG
AAGGATGATGATGACATCTGGTGAGGCTGTCAAGTACAAGAGCTCTCTTG
ATGCATTCTCTCAGATCCTGAAGAATGAGGGTGCTAAGTCTCTCTTCAAG
GGTGCTGGAGCAAACATCCTCCGAGCTGTTGCAGGTGCCGGTGTGCTTGC
TGGTTATGACAAATTGCAGTTAATTGTCTTTGGGAAGAAATATGGCTCTG
GCGGTGCCTAAGGCATATTCCCTTTGGTTTTTTTAGCTTTAGATATTGAT
GAAAATCTGATACTCTGAGAATTTTTCCGGCAGAGGAGTCTTCTTTAATA
ATTCACTTTTTGGGGGGAGCAAGAACCCCCTGAACAATTTAGTTTTGGAT
GGAAATTTTGTTTTGCATAAACCTGATTCACTCGAGTTACACAGCTCGAC
ATGATTTGAGGAATATTTTCAATGTACTAGTGATTTTTTCAGATCAGTTA
AACATCATTTTGCTTTAAAAAAAAAAAAAAAAAACTCGGGGGGGGGCCCG
GT
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