CX292184

Overview
NameCX292184
Unique NameCX292184
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length660
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15535 contig Ccv1_Contig15535:62..721. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX292184 vs. ExPASy Swiss-Prot
Match: CALX_SOYBN (Calnexin homolog OS=Glycine max PE=2 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 7.825e-77
Identity = 135/185 (72.97%), Postives = 155/185 (83.78%), Query Frame = 2
Query:    2 APGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPKFDV-XXXXXXXXXXXXGSDGLAGFQKKVFDLLYKVADIPFLDAYKLKIIDVIEKGEKQPNLTIGILVSVVAVIITVLFKIIFGGKK-AKV 550
            APGCGEWKRP KRNPAYKGKW AP+IDNP+YKGIWKP++IPNP YFEL KPDFEPIAA+GIEIWTMQDGILFDN+LI+ D+KVAESYR + WKPKF V             GSDG++GFQKKVFDLLYK+ADIPFL  +K KI D+IEK EKQPNLTIGILV+VV V +++ F++IFGGKK AKV
Sbjct:  319 APGCGEWKRPTKRNPAYKGKWSAPYIDNPSYKGIWKPREIPNPEYFELAKPDFEPIAAIGIEIWTMQDGILFDNVLIANDDKVAESYRETTWKPKFTVEKDKLKAEEEAATGSDGISGFQKKVFDLLYKIADIPFLSEHKSKIFDLIEKAEKQPNLTIGILVAVVVVFVSIFFRLIFGGKKPAKV 503          
BLAST of CX292184 vs. ExPASy Swiss-Prot
Match: CALX2_ARATH (Calnexin homolog 2 OS=Arabidopsis thaliana GN=At5g07340 PE=2 SV=2)

HSP 1 Score: 282.722 bits (722), Expect = 1.130e-75
Identity = 133/184 (72.28%), Postives = 153/184 (83.15%), Query Frame = 2
Query:    2 APGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPKFDVXXXXXXXXXXXXG-SDGLAGFQKKVFDLLYKVADIPFLDAYKLKIIDVIEKGEKQPNLTIGILVSVVAVIITVLFKIIFGGKKAKV 550
            APGCGEWKRPMKRNPAYKGKW +P IDNP YKGIWKP+ IPNP+YFEL++P+ EPIAA+GIEIWTMQDGILFDNILISKDEKVAE+YR S WKPKFDV            G +DGL  +QKKVFDLLYKVADI FL AYK KI+++IEK E QPNLTIG+L+S+V V +++ FK+IFGG KAKV
Sbjct:  312 APGCGEWKRPMKRNPAYKGKWSSPLIDNPAYKGIWKPRDIPNPDYFELERPNLEPIAAIGIEIWTMQDGILFDNILISKDEKVAETYRQSTWKPKFDVEKEKQKAEDEAAGEADGLKSYQKKVFDLLYKVADISFLSAYKSKIMELIEKAETQPNLTIGVLISIVIVFLSLFFKLIFGGAKAKV 495          
BLAST of CX292184 vs. ExPASy Swiss-Prot
Match: CALX_PEA (Calnexin homolog OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 4.294e-75
Identity = 129/187 (68.98%), Postives = 151/187 (80.75%), Query Frame = 2
Query:    2 APGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPKFDVXXXXXXXXXXXXG-------SDGLAGFQKKVFDLLYKVADIPFLDAYKLKIIDVIEKGEKQPNLTIGILVSVVAVIITVLFKIIFGGKK 541
            APGCGEWKRP K NPAYKGKW AP+IDNPNYKGIWKPQ+IPNP YFEL+KPDFEPIAA+GIEIWTMQDGILFDN+LI+KD+K+AESYR + WKPKF++                    S+G+AG QKK FDLLYK+ADI FL   K KII++IEKGEKQPNLTIGI+VSVV V +++ F++IFGGKK
Sbjct:  318 APGCGEWKRPTKSNPAYKGKWSAPYIDNPNYKGIWKPQEIPNPEYFELEKPDFEPIAAIGIEIWTMQDGILFDNVLIAKDDKIAESYRETTWKPKFNIEKEKQKHEEEAAAAAAARSESEGIAGIQKKAFDLLYKIADIAFLSGQKEKIIEIIEKGEKQPNLTIGIIVSVVIVFVSIFFRLIFGGKK 504          
BLAST of CX292184 vs. ExPASy Swiss-Prot
Match: CALX1_ARATH (Calnexin homolog 1 OS=Arabidopsis thaliana GN=CNX1 PE=1 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 3.077e-73
Identity = 129/182 (70.88%), Postives = 149/182 (81.87%), Query Frame = 2
Query:    2 APGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPKFDVXXXXXXXXXXXXGS-DGLAGFQKKVFDLLYKVADIPFLDAYKLKIIDVIEKGEKQPNLTIGILVSVVAVIITVLFKIIFGGKKA 544
            APGCGEWKRPMKRNPAYKGKW +P IDNP YKGIWKP+ IPNP+YFELD+PD+EPIAA+GIEIWTMQDGILFDNILI+KDEKVAE+YR + WKPKFDV            GS DGL  +QK VFDLL KVAD+ FL AYK KI ++IEK E+QPNLTIG+LV++V V  ++  K+IFGGKKA
Sbjct:  310 APGCGEWKRPMKRNPAYKGKWSSPLIDNPAYKGIWKPRDIPNPDYFELDRPDYEPIAAIGIEIWTMQDGILFDNILIAKDEKVAETYRQTTWKPKFDVEKEKQKAEEEAAGSADGLKSYQKVVFDLLNKVADLSFLSAYKSKITELIEKAEQQPNLTIGVLVAIVVVFFSLFLKLIFGGKKA 491          
BLAST of CX292184 vs. ExPASy Swiss-Prot
Match: CALX_HELTU (Calnexin homolog OS=Helianthus tuberosus PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.584e-61
Identity = 111/187 (59.36%), Postives = 140/187 (74.87%), Query Frame = 2
Query:    2 APGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAE------SYRASAWKPKFDVXXXXXXXXXXXXGSDGLAGFQKKVFDLLYKVADIPFLDAYKLKIIDVIEKGEKQPNLTIGILVSVVAVIITVLFKIIFGGKKA 544
            APGCGEW+RP+KRNPAYKGKWHAP IDNP YKGIWKP++IPNP+YFEL+KP+FEPIAA+GIE    QDGILFDNILI+ DEK A         R+  WK +                 DGL G QK VFD+LYK+AD+PFL  +K+K++++IEK E QPN+TIG++VS++ VI ++L K++FGGKKA
Sbjct:  314 APGCGEWRRPLKRNPAYKGKWHAPLIDNPAYKGIWKPREIPNPDYFELEKPNFEPIAAIGIEDLDQQDGILFDNILIASDEKTAAKSGILLGSRSLRWKKR------NRRLKKNQPLLDGLKGIQKAVFDVLYKIADLPFLGDHKVKVLELIEKAETQPNITIGVIVSIIVVIFSILLKLLFGGKKA 494          
BLAST of CX292184 vs. ExPASy Swiss-Prot
Match: CALX_ASPFU (Calnexin homolog OS=Aspergillus fumigatus GN=AFUA_4G12850 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.015e-28
Identity = 60/97 (61.86%), Postives = 68/97 (70.10%), Query Frame = 2
Query:    8 GCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKP-DFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPKFDV 295
            GCG W  PMK+NPAYKGKW AP IDNP YKGIWKP++IPNP YFE   P +FEP+ AVG EIWTMQ+ ILFDNI I    + AE  R   +  K  V
Sbjct:  342 GCGPWTPPMKKNPAYKGKWTAPLIDNPAYKGIWKPRKIPNPAYFEDKTPSNFEPMGAVGFEIWTMQNDILFDNIYIGHSIEDAEKLRKETFDLKHPV 438          
BLAST of CX292184 vs. ExPASy Swiss-Prot
Match: CALX_MOUSE (Calnexin OS=Mus musculus GN=Canx PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.267e-26
Identity = 50/93 (53.76%), Postives = 66/93 (70.97%), Query Frame = 2
Query:    2 APGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFE-LDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAW 277
            APGCG W+RPM  NP YKGKW  P IDNPNY+GIWKP++IPNP++FE L+     P +A+G+E+W+M   I FDN +IS D +V + +    W
Sbjct:  364 APGCGVWQRPMIDNPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPFSAIGLELWSMTSDIFFDNFIISGDRRVVDDWANDGW 456          
BLAST of CX292184 vs. ExPASy Swiss-Prot
Match: CALX_RAT (Calnexin OS=Rattus norvegicus GN=Canx PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.654e-26
Identity = 50/93 (53.76%), Postives = 66/93 (70.97%), Query Frame = 2
Query:    2 APGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFE-LDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAW 277
            APGCG W+RPM  NP YKGKW  P IDNPNY+GIWKP++IPNP++FE L+     P +A+G+E+W+M   I FDN +IS D +V + +    W
Sbjct:  364 APGCGVWQRPMIDNPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIISGDRRVVDDWANDGW 456          
BLAST of CX292184 vs. ExPASy Swiss-Prot
Match: CALX_CANFA (Calnexin OS=Canis familiaris GN=CANX PE=1 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 6.287e-26
Identity = 48/93 (51.61%), Postives = 65/93 (69.89%), Query Frame = 2
Query:    2 APGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFE-LDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAW 277
            APGCG W+RPM  NP YKGKW  P IDNPNY+GIWKP++IPNP++FE L+     P +A+G+E+W+M   I FDN ++  D +V + +    W
Sbjct:  364 APGCGVWQRPMIDNPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPFSAIGLELWSMTSDIFFDNFIVCGDRRVVDDWANDGW 456          
BLAST of CX292184 vs. ExPASy Swiss-Prot
Match: CALX_PONAB (Calnexin OS=Pongo abelii GN=CANX PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.389e-25
Identity = 47/93 (50.54%), Postives = 65/93 (69.89%), Query Frame = 2
Query:    2 APGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFE-LDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAW 277
            APGCG W+RPM  NP YKGKW  P IDNP+Y+GIWKP++IPNP++FE L+     P +A+G+E+W+M   I FDN +I  D ++ + +    W
Sbjct:  363 APGCGVWQRPMIDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICADRRIVDDWANDGW 455          
The following BLAST results are available for this feature:
BLAST of CX292184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
CALX_SOYBN7.825e-7772.97Calnexin homolog OS=Glycine max PE=2 SV=1[more]
CALX2_ARATH1.130e-7572.28Calnexin homolog 2 OS=Arabidopsis thaliana GN=At5g... [more]
CALX_PEA4.294e-7568.98Calnexin homolog OS=Pisum sativum PE=2 SV=1[more]
CALX1_ARATH3.077e-7370.88Calnexin homolog 1 OS=Arabidopsis thaliana GN=CNX1... [more]
CALX_HELTU1.584e-6159.36Calnexin homolog OS=Helianthus tuberosus PE=2 SV=1[more]
CALX_ASPFU3.015e-2861.86Calnexin homolog OS=Aspergillus fumigatus GN=AFUA_... [more]
CALX_MOUSE1.267e-2653.76Calnexin OS=Mus musculus GN=Canx PE=1 SV=1[more]
CALX_RAT1.654e-2653.76Calnexin OS=Rattus norvegicus GN=Canx PE=1 SV=1[more]
CALX_CANFA6.287e-2651.61Calnexin OS=Canis familiaris GN=CANX PE=1 SV=3[more]
CALX_PONAB2.389e-2550.54Calnexin OS=Pongo abelii GN=CANX PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC04011E05SK FlavFr1 Citrus clementina cDNA clone C04011E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292184 ID=CX292184; Name=CX292184; organism=Citrus clementina; type=EST; length=660bp
AGCCCCTGGATGCGGCGAGTGGAAGAGGCCAATGAAGAGGAATCCTGCCT
ACAAGGGCAAATGGCATGCTCCACATATTGACAACCCTAATTACAAGGGT
ATTTGGAAGCCTCAGCAGATTCCAAACCCCAACTATTTTGAGCTTGACAA
ACCTGACTTTGAGCCTATTGCTGCTGTTGGCATTGAGATCTGGACAATGC
AGGATGGTATTTTGTTTGACAACATTTTGATATCAAAGGATGAGAAAGTT
GCAGAGTCCTATCGGGCTTCTGCATGGAAGCCTAAGTTTGATGTTGAGAA
AGAGAAACTGAAGGCTGAGGAAGCAGCTGCTGGTTCAGATGGCCTTGCAG
GCTTCCAGAAGAAGGTATTTGATCTCTTGTACAAGGTTGCAGACATTCCT
TTCTTGGATGCATACAAACTTAAGATCATTGATGTGATTGAGAAGGGAGA
GAAACAACCAAACCTTACAATTGGTATCCTTGTCTCCGTTGTGGCGGTGA
TCATCACAGTTCTGTTCAAGATCATTTTTGGTGGAAAGAAGGCTAAAGTA
GAGCCCCCAAAAGAAACAGAAGCTGCAGAGAGTTCCTCGAGCAAACAAGA
GGACAGTGGTGAAAAGGAAGAAGAGACCGAGAAGGAAGAAACTGCTGCTG
CTCCTGCTCG
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