CX292222
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX292222 vs. ExPASy Swiss-Prot
Match: P4R3B_MOUSE (Serine/threonine-protein phosphatase 4 regulatory subunit 3B OS=Mus musculus GN=Smek2 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 3.676e-23 Identity = 56/125 (44.80%), Postives = 80/125 (64.00%), Query Frame = 3 Query: 30 DEHLINHFVKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYLASLHSFKVKYEQCLESSGTNNNFNSV-----DPRKRNDERALEKEEEDYFNDSDEED 389 DE + K NL +P+++A + NG RYNLLNSAV+ELFE+IR E++KSL +IV++F+ L + EY+ + K KYEQ E N NSV R R D +ALE++EE +FN+ D+E+ Sbjct: 570 DEFYNRYITKGNLFEPVINALLDNGTRYNLLNSAVIELFEFIRVEDIKSLTAHIVENFYKALESIEYVQTFKGLKTKYEQ--EKDRQNQKLNSVPSILRSNRFRRDAKALEEDEEMWFNEDDDEE 692
BLAST of CX292222 vs. ExPASy Swiss-Prot
Match: P4R3B_HUMAN (Serine/threonine-protein phosphatase 4 regulatory subunit 3B OS=Homo sapiens GN=SMEK2 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.801e-23 Identity = 56/125 (44.80%), Postives = 80/125 (64.00%), Query Frame = 3 Query: 30 DEHLINHFVKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYLASLHSFKVKYEQCLESSGTNNNFNSV-----DPRKRNDERALEKEEEDYFNDSDEED 389 DE + K NL +P+++A + NG RYNLLNSAV+ELFE+IR E++KSL +IV++F+ L + EY+ + K KYEQ E N NSV R R D +ALE++EE +FN+ +EE+ Sbjct: 602 DEFYNRYITKGNLFEPVINALLDNGTRYNLLNSAVIELFEFIRVEDIKSLTAHIVENFYKALESIEYVQTFKGLKTKYEQ--EKDRQNQKLNSVPSILRSNRFRRDAKALEEDEEMWFNEDEEEE 724
BLAST of CX292222 vs. ExPASy Swiss-Prot
Match: P4R3B_XENLA (Serine/threonine-protein phosphatase 4 regulatory subunit 3-B OS=Xenopus laevis GN=smek2-B PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.065e-22 Identity = 54/125 (43.20%), Postives = 79/125 (63.20%), Query Frame = 3 Query: 30 DEHLINHFVKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYLASLHSFKVKYEQCLESSGTNNNFNSV-----DPRKRNDERALEKEEEDYFNDSDEED 389 DE + +K NL +P++ A + NG RYNLLNSA++ELFE+IR E++KSL +IV++F+ L + EY+ + K +YEQ E + +SV R R D RALE +EE +FN+ DEE+ Sbjct: 570 DEFYNRYIIKGNLFEPVIHALLDNGTRYNLLNSAIIELFEFIRVEDIKSLTSHIVENFYKALESIEYVQTFKGLKTRYEQ--EKDRQSQKLSSVPSILRSNRFRRDARALEDDEELWFNEDDEEE 692
BLAST of CX292222 vs. ExPASy Swiss-Prot
Match: PP4R3_XENTR (Serine/threonine-protein phosphatase 4 regulatory subunit 3 OS=Xenopus tropicalis GN=smek2 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.933e-22 Identity = 53/125 (42.40%), Postives = 80/125 (64.00%), Query Frame = 3 Query: 30 DEHLINHFVKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYLASLHSFKVKYEQCLESSGTNNNFNSV-----DPRKRNDERALEKEEEDYFNDSDEED 389 DE + +K NL +P+++A + NG RYNLLNSA++ELFE+IR E++KSL +IV++F+ L + EY+ + K +YEQ E + +SV R R D RALE +EE +FN+ +EE+ Sbjct: 570 DEFYNRYIIKGNLFEPVINALLDNGTRYNLLNSAIIELFEFIRVEDIKSLTSHIVENFYKALESIEYVQTFKGLKTRYEQ--EKDRQSQKLSSVPSILRSNRFRRDARALEDDEELWFNEDEEEE 692
BLAST of CX292222 vs. ExPASy Swiss-Prot
Match: P4R3A_XENLA (Serine/threonine-protein phosphatase 4 regulatory subunit 3-A OS=Xenopus laevis GN=smek2-A PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.055e-22 Identity = 54/125 (43.20%), Postives = 78/125 (62.40%), Query Frame = 3 Query: 30 DEHLINHFVKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYLASLHSFKVKYEQCLESSGTNNNFNSV-----DPRKRNDERALEKEEEDYFNDSDEED 389 DE + +K NL P+++A + NG RYNLLNSA++ELFE+IR E++KSL +IV++F+ L EY+ + K +YEQ E + +SV R R D RALE +EE +FN+ DEE+ Sbjct: 570 DEFYNRYIIKGNLFDPVINALLDNGTRYNLLNSAIIELFEFIRVEDIKSLTSHIVENFYKALEPIEYVQTFKGLKTRYEQ--EKDRQSQKLSSVPSILRSNRFRRDARALEDDEELWFNEDDEEE 692
BLAST of CX292222 vs. ExPASy Swiss-Prot
Match: PP4R3_XENLA (Serine/threonine-protein phosphatase 4 regulatory subunit 3 OS=Xenopus laevis GN=smek1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.869e-21 Identity = 53/125 (42.40%), Postives = 83/125 (66.40%), Query Frame = 3 Query: 30 DEHLINHFVKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYLASLHSFKVKYEQCLESSGTNNNFNSV-----DPRKRNDERALEKEEEDYFNDSDEED 389 DE + VK+ L +P+V AF+ NG+RYNL+NSA+LE+FEYIR E++KSL ++V+++W L + EY+ + K++Y+Q E N +S+ + R R D R++E EEE +FN +DE+D Sbjct: 554 DEFYNRYIVKSFLFEPVVKAFLNNGSRYNLMNSAILEIFEYIRVEDIKSLTAHVVENYWKALEDVEYVQTFKGLKLRYDQQRERQ-DNPKLDSMRSILRNHRYRRDARSIEDEEEMWFN-TDEDD 676
BLAST of CX292222 vs. ExPASy Swiss-Prot
Match: PP4R3_DANRE (Serine/threonine-protein phosphatase 4 regulatory subunit 3 OS=Danio rerio GN=smek1 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.308e-20 Identity = 52/125 (41.60%), Postives = 82/125 (65.60%), Query Frame = 3 Query: 30 DEHLINHFVKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYLASLHSFKVKYEQCLESSGTNNNFNSV-----DPRKRNDERALEKEEEDYFNDSDEED 389 DE + ++N L +P+V AF+ NG+RYNL+NSA++E+FEY+R E++KSL +I++++W L + +Y+ + K++YEQ E N +S+ + R R D R LE EEE +FN +DEED Sbjct: 554 DEFYNRYIMRNFLFEPVVKAFLNNGSRYNLINSAIIEMFEYVRVEDVKSLTAHIIENYWKGLEDVDYVQTFKGLKLRYEQQRERQ-DNPKLDSMRSILRNHRFRRDARTLEDEEEMWFN-TDEED 676
BLAST of CX292222 vs. ExPASy Swiss-Prot
Match: PP4R3_TETNG (Serine/threonine-protein phosphatase 4 regulatory subunit 3 OS=Tetraodon nigroviridis GN=smek1 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.230e-20 Identity = 51/125 (40.80%), Postives = 82/125 (65.60%), Query Frame = 3 Query: 30 DEHLINHFVKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYLASLHSFKVKYEQCLESSGTNNNFNSV-----DPRKRNDERALEKEEEDYFNDSDEED 389 DE + ++N L +P++ AF+ NG+RYNL+NSA++E+FEY+R E++KSL +IV+++W L + +Y+ + K++YEQ E N +S+ + R R D R LE EEE +FN +DE+D Sbjct: 554 DEFYNRYIMRNFLFEPVIKAFLNNGSRYNLMNSAIIEMFEYVRVEDVKSLTAHIVENYWKALEDVDYVQTFKGLKLRYEQQRERQ-DNPKLDSMRSILRNHRFRRDARTLEDEEEMWFN-TDEDD 676
BLAST of CX292222 vs. ExPASy Swiss-Prot
Match: P4R3A_MOUSE (Serine/threonine-protein phosphatase 4 regulatory subunit 3A OS=Mus musculus GN=Smek1 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.888e-19 Identity = 49/125 (39.20%), Postives = 82/125 (65.60%), Query Frame = 3 Query: 30 DEHLINHFVKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYLASLHSFKVKYEQCLESSGTNNNFNSV-----DPRKRNDERALEKEEEDYFNDSDEED 389 DE + +K+ L +P+V AF+ NG+RYNL+NSA++E+FE+IR E++KSL ++++++W L + +Y+ + K+++EQ E N +S+ + R R D R LE EEE +FN +DE+D Sbjct: 554 DEFYNRYIMKSFLFEPVVKAFLNNGSRYNLMNSAIIEMFEFIRVEDIKSLTAHVIENYWKALEDVDYVQTFKGLKLRFEQQRERQ-DNPKLDSMRSILRNHRYRRDARTLEDEEEMWFN-TDEDD 676
BLAST of CX292222 vs. ExPASy Swiss-Prot
Match: P4R3A_HUMAN (Serine/threonine-protein phosphatase 4 regulatory subunit 3A OS=Homo sapiens GN=SMEK1 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.888e-19 Identity = 49/125 (39.20%), Postives = 82/125 (65.60%), Query Frame = 3 Query: 30 DEHLINHFVKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYLASLHSFKVKYEQCLESSGTNNNFNSV-----DPRKRNDERALEKEEEDYFNDSDEED 389 DE + +K+ L +P+V AF+ NG+RYNL+NSA++E+FE+IR E++KSL ++++++W L + +Y+ + K+++EQ E N +S+ + R R D R LE EEE +FN +DE+D Sbjct: 567 DEFYNRYIMKSFLFEPVVKAFLNNGSRYNLMNSAIIEMFEFIRVEDIKSLTAHVIENYWKALEDVDYVQTFKGLKLRFEQQRERQ-DNPKLDSMRSILRNHRYRRDARTLEDEEEMWFN-TDEDD 689 The following BLAST results are available for this feature:
BLAST of CX292222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292222 ID=CX292222; Name=CX292222; organism=Citrus clementina; type=EST; length=747bpback to top |