CX292223

Overview
NameCX292223
Unique NameCX292223
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7316 contig Ccv1_Contig7316:307..1010. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX292223 vs. ExPASy Swiss-Prot
Match: PLDA1_RICCO (Phospholipase D alpha 1 OS=Ricinus communis GN=PLD1 PE=1 SV=1)

HSP 1 Score: 427.172 bits (1097), Expect = 4.234e-119
Identity = 204/234 (87.18%), Postives = 219/234 (93.59%), Query Frame = 3
Query:    3 DVLVHLRELGDIIIPPSPVMYPDDHDTWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAXGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSXYLRAQEARRFMIYVHAKMMIVD 704
            D+L+ LREL D+IIPPSPVMYPDD + WNVQLFRSIDGGAAFGFPETPEDA  AGLVSGKDNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSF WS DGIKPE+INALHLIPKELSLKI+SKI AGERFTVYIVVPMWPEG PES SVQAILDWQ+RTM+MMYKD+VQAL+A GI+EDPRNYLTFFCLGNREVK+SGEYEPAE+PE D+ Y+RAQEARRFMIYVH KMMIVD
Sbjct:  433 DLLIQLRELEDVIIPPSPVMYPDDFEAWNVQLFRSIDGGAAFGFPETPEDAPEAGLVSGKDNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSFGWSPDGIKPEDINALHLIPKELSLKILSKIAAGERFTVYIVVPMWPEGIPESASVQAILDWQKRTMEMMYKDIVQALKANGIIEDPRNYLTFFCLGNREVKKSGEYEPAEKPEPDTDYIRAQEARRFMIYVHTKMMIVD 666          
BLAST of CX292223 vs. ExPASy Swiss-Prot
Match: PLDA1_VIGUN (Phospholipase D alpha 1 OS=Vigna unguiculata GN=PLD1 PE=2 SV=1)

HSP 1 Score: 417.157 bits (1071), Expect = 4.382e-116
Identity = 202/234 (86.32%), Postives = 216/234 (92.31%), Query Frame = 3
Query:    3 DVLVHLRELGDIIIPPSPVMYPDDHDTWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAXGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSXYLRAQEARRFMIYVHAKMMIVD 704
            D+L  LREL D+IIPPSPV +PDDH+TWNVQLFRSIDGGAAFGFP+TPEDAA+AGLVSGKDNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSF+W+ D IK EEI ALHLIPKELSLKIVSKIEAGERF VY+VVPMWPEG PES SVQAILDWQ+RT++MMYKDVVQALRA G  EDPRNYLTFFCLGNREVK+SGEYEPAE+PE DS Y RAQEARRFMIYVH KMMIVD
Sbjct:  434 DILAPLRELEDVIIPPSPVTFPDDHETWNVQLFRSIDGGAAFGFPDTPEDAAKAGLVSGKDNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSFSWNNDDIKREEIGALHLIPKELSLKIVSKIEAGERFAVYVVVPMWPEGIPESSSVQAILDWQKRTIEMMYKDVVQALRAKGSDEDPRNYLTFFCLGNREVKKSGEYEPAEQPEPDSDYQRAQEARRFMIYVHTKMMIVD 667          
BLAST of CX292223 vs. ExPASy Swiss-Prot
Match: PLDA1_ARATH (Phospholipase D alpha 1 OS=Arabidopsis thaliana GN=PLDALPHA1 PE=1 SV=2)

HSP 1 Score: 413.305 bits (1061), Expect = 6.327e-115
Identity = 197/234 (84.19%), Postives = 216/234 (92.31%), Query Frame = 3
Query:    3 DVLVHLRELGDIIIPPSPVMYPDDHDTWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAXGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSXYLRAQEARRFMIYVHAKMMIVD 704
            D+LV LR+L DIII PSPVM+ +DHD WNVQLFRSIDGGAA GFPE+PE AA AGLVSGKDNIIDRSIQDAYIHAIRRAK+FIY+ENQYFLGSSFAW+ADGI PE+INALHLIPKELSLKIVSKIE GE+F VY+VVPMWPEG PESGSVQAILDWQRRTM+MMYKDV+QALRA G+ EDPRNYLTFFCLGNREVK+ GEYEPAE+P+ D+ Y+RAQEARRFMIYVH KMMIVD
Sbjct:  435 DILVKLRDLSDIIITPSPVMFQEDHDVWNVQLFRSIDGGAAAGFPESPEAAAEAGLVSGKDNIIDRSIQDAYIHAIRRAKDFIYVENQYFLGSSFAWAADGITPEDINALHLIPKELSLKIVSKIEKGEKFRVYVVVPMWPEGLPESGSVQAILDWQRRTMEMMYKDVIQALRAQGLEEDPRNYLTFFCLGNREVKKDGEYEPAEKPDPDTDYMRAQEARRFMIYVHTKMMIVD 668          
BLAST of CX292223 vs. ExPASy Swiss-Prot
Match: PLDA1_BRAOC (Phospholipase D alpha 1 OS=Brassica oleracea var. capitata GN=PLD1 PE=2 SV=1)

HSP 1 Score: 412.535 bits (1059), Expect = 1.079e-114
Identity = 199/234 (85.04%), Postives = 214/234 (91.45%), Query Frame = 3
Query:    3 DVLVHLRELGDIIIPPSPVMYPDDHDTWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAXGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSXYLRAQEARRFMIYVHAKMMIVD 704
            D+LV LREL DIII PSPVM+ +DHD WNVQLFRSIDGGAA GFPE+PE AA AGLVSGKDNIIDRSIQDAYIHAIRRAK+FIYIENQYFLGSSFAW+ADGI PE+INALHLIPKELSLKIVSKIE GE+F VY+VVPMWPEG PES SVQAILDWQRRTM MMYKD+VQALRA G+ EDPRNYLTFFCLGNREVK+ GEYEPAERP+ DS Y++AQEARRFMIYVH KMMIVD
Sbjct:  435 DILVKLRELSDIIITPSPVMFQEDHDVWNVQLFRSIDGGAAAGFPESPEAAAEAGLVSGKDNIIDRSIQDAYIHAIRRAKDFIYIENQYFLGSSFAWAADGITPEDINALHLIPKELSLKIVSKIEKGEKFRVYVVVPMWPEGLPESASVQAILDWQRRTMQMMYKDIVQALRAQGLEEDPRNYLTFFCLGNREVKKEGEYEPAERPDADSSYMKAQEARRFMIYVHTKMMIVD 668          
BLAST of CX292223 vs. ExPASy Swiss-Prot
Match: PLDA2_ARATH (Phospholipase D alpha 2 OS=Arabidopsis thaliana GN=PLDALPHA2 PE=2 SV=1)

HSP 1 Score: 410.994 bits (1055), Expect = 3.140e-114
Identity = 197/235 (83.83%), Postives = 219/235 (93.19%), Query Frame = 3
Query:    3 DVLVHLRELGDIIIPPSPVMYPDDHDTWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAXGIM-EDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSXYLRAQEARRFMIYVHAKMMIVD 704
            D+LV +RELGDIIIPPSPV++ +DHD WNVQLFRSIDGGAA GFP++PE AA AGLVSGKDNIIDRSIQDAYIHAIRRAK+FIYIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKI+AGE+F VY+VVPMWPEG PESGSVQAILDWQ+RTM+MMYKDV++ALR  G+  EDPR+YLTFFCLGNREVK+ GEYEP+E+PE D+ Y+RAQEARRFMIYVH KMMIVD
Sbjct:  434 DILVKMRELGDIIIPPSPVLFSEDHDVWNVQLFRSIDGGAAAGFPDSPEAAAEAGLVSGKDNIIDRSIQDAYIHAIRRAKDFIYIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKIKAGEKFKVYVVVPMWPEGIPESGSVQAILDWQKRTMEMMYKDVIKALRENGLEGEDPRDYLTFFCLGNREVKKDGEYEPSEKPEPDTDYIRAQEARRFMIYVHTKMMIVD 668          
BLAST of CX292223 vs. ExPASy Swiss-Prot
Match: PLDA2_BRAOC (Phospholipase D alpha 2 OS=Brassica oleracea var. capitata GN=PLD2 PE=1 SV=2)

HSP 1 Score: 408.297 bits (1048), Expect = 2.035e-113
Identity = 195/234 (83.33%), Postives = 214/234 (91.45%), Query Frame = 3
Query:    3 DVLVHLRELGDIIIPPSPVMYPDDHDTWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAXGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSXYLRAQEARRFMIYVHAKMMIVD 704
            D+LV LREL DIII PSPVM+ +DHD WNVQLFRSIDGGAA GFP++PE AA AGLVSGKDN+IDRSIQDAYIHAIRRAK+FIYIENQYFLGSSFAW+ADGI PE+INALHLIPKELSLKIV KIE GE+F VY+VVPMWPEG PES SVQAILDWQRRT++MMYKDV QALRA G+ EDPRNYLTFFCLGNREVK+ GEYEPAERP+ D+ Y+RAQEARRFMIYVH+KMMIVD
Sbjct:  437 DILVKLRELSDIIITPSPVMFQEDHDVWNVQLFRSIDGGAAAGFPDSPEVAAEAGLVSGKDNVIDRSIQDAYIHAIRRAKDFIYIENQYFLGSSFAWAADGITPEDINALHLIPKELSLKIVDKIEKGEKFRVYVVVPMWPEGIPESASVQAILDWQRRTLEMMYKDVTQALRAQGLEEDPRNYLTFFCLGNREVKKEGEYEPAERPDPDTDYMRAQEARRFMIYVHSKMMIVD 670          
BLAST of CX292223 vs. ExPASy Swiss-Prot
Match: PLDA1_TOBAC (Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PLD1 PE=2 SV=2)

HSP 1 Score: 404.06 bits (1037), Expect = 3.839e-112
Identity = 196/234 (83.76%), Postives = 213/234 (91.03%), Query Frame = 3
Query:    3 DVLVHLRELGDIIIPPSPVMYPDDHDTWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAXGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSXYLRAQEARRFMIYVHAKMMIVD 704
            DVLV+ REL DIIIPPSPVM+ DD +TWNVQLFRSID GAAFGFPETPEDAA+AGLVSG DNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSS+ W +D IK E+I ALH+IPKEL+LKIVSKIEAGERFTVY+VVPMWPEG PES SVQAILDWQRRTM+MMYK +VQAL A GI EDPRNYLTFFC+GNREVK+SG YEP+E PE DS Y+RAQEARRFMIYVH+KMMIVD
Sbjct:  433 DVLVNFRELDDIIIPPSPVMHLDDSETWNVQLFRSIDEGAAFGFPETPEDAAKAGLVSGXDNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSYDWQSDDIKVEDIGALHVIPKELALKIVSKIEAGERFTVYVVVPMWPEGIPESASVQAILDWQRRTMEMMYKHIVQALNAKGIEEDPRNYLTFFCIGNREVKKSGAYEPSETPEPDSDYIRAQEARRFMIYVHSKMMIVD 666          
BLAST of CX292223 vs. ExPASy Swiss-Prot
Match: PLDA1_MAIZE (Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 SV=1)

HSP 1 Score: 403.675 bits (1036), Expect = 5.013e-112
Identity = 193/234 (82.48%), Postives = 212/234 (90.60%), Query Frame = 3
Query:    3 DVLVHLRELGDIIIPPSPVMYPDDHDTWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAXGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSXYLRAQEARRFMIYVHAKMMIVD 704
            D+LV LR+L DIIIPPSPVM+P+D +TWNVQLFRSIDGGAAFGFPETPE+AARAGLVSGKD IIDRSIQDAY++AIRRAKNFIYIENQYFLGSS+ W  +GIKPEEI ALHLIPKELSLKIVSKIEAGERFTVY+VVPMWPEG PES SVQAILDWQRRTM+MMY D+ QAL A GI  +P++YLTFFCLGNREVK+ GEYEP E PE D+ Y+RAQEARRFMIYVH KMMIVD
Sbjct:  437 DLLVRLRDLPDIIIPPSPVMFPEDRETWNVQLFRSIDGGAAFGFPETPEEAARAGLVSGKDQIIDRSIQDAYVNAIRRAKNFIYIENQYFLGSSYGWKPEGIKPEEIGALHLIPKELSLKIVSKIEAGERFTVYVVVPMWPEGVPESASVQAILDWQRRTMEMMYTDIAQALEANGIEANPKDYLTFFCLGNREVKQEGEYEPEEHPEPDTDYIRAQEARRFMIYVHTKMMIVD 670          
BLAST of CX292223 vs. ExPASy Swiss-Prot
Match: PLDA1_ORYSJ (Phospholipase D alpha 1 OS=Oryza sativa subsp. japonica GN=PLD1 PE=1 SV=2)

HSP 1 Score: 400.208 bits (1027), Expect = 5.543e-111
Identity = 188/234 (80.34%), Postives = 215/234 (91.88%), Query Frame = 3
Query:    3 DVLVHLRELGDIIIPPSPVMYPDDHDTWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAXGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSXYLRAQEARRFMIYVHAKMMIVD 704
            D+L+ LR+L D IIPPSPVM+P+D +TWNVQLFRSIDGGAAFGFP+TPE+AA+AGLVSGKD IIDRSIQDAYIHAIRRAKNFIYIENQYFLGSS+AW  +GIKPE+I ALHLIPKEL+LK+VSKIEAGERFTVY+VVPMWPEG PESGSVQAILDWQRRTM+MMY D+ +AL+A GI  +P++YLTFFCLGNREVK++GEY+P E+PE D+ Y RAQEARRFMIYVH KMMIVD
Sbjct:  437 DLLLQLRDLSDTIIPPSPVMFPEDRETWNVQLFRSIDGGAAFGFPDTPEEAAKAGLVSGKDQIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSYAWKPEGIKPEDIGALHLIPKELALKVVSKIEAGERFTVYVVVPMWPEGVPESGSVQAILDWQRRTMEMMYTDITEALQAKGIEANPKDYLTFFCLGNREVKQAGEYQPEEQPEADTDYSRAQEARRFMIYVHTKMMIVD 670          
BLAST of CX292223 vs. ExPASy Swiss-Prot
Match: PLDA2_ORYSJ (Phospholipase D alpha 2 OS=Oryza sativa subsp. japonica GN=PLD2 PE=2 SV=2)

HSP 1 Score: 378.637 bits (971), Expect = 1.727e-104
Identity = 181/234 (77.35%), Postives = 206/234 (88.03%), Query Frame = 3
Query:    3 DVLVHLRELGDIIIPPSPVMYPDDHDTWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAXGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSXYLRAQEARRFMIYVHAKMMIVD 704
            D+L+ L+ + D+IIPPSPVM+PDD + W+VQLFRSIDGGA FGFP TPE AAR+GLVSGK+N IDRSIQDAYIHAIRRAKNFIYIENQYFLGSSFAW ADGI+PE+I ALHLIP+E+SLKIV+KIEAGERF VY+V+PMWPEG P SGSVQAILDWQRRTM+MMY D+  AL A  I  DPR+YLTFFCLGNREVK +GEYEPA RP D + Y +AQ+ARRFMIYVH+KMMIVD
Sbjct:  442 DLLLDLKAMADLIIPPSPVMFPDDGEAWSVQLFRSIDGGACFGFPSTPEAAARSGLVSGKNNTIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSFAWKADGIRPEDIEALHLIPREISLKIVNKIEAGERFAVYVVLPMWPEGPPASGSVQAILDWQRRTMEMMYYDIAVALEAKRINADPRDYLTFFCLGNREVKLNGEYEPAGRPLDGTDYAKAQKARRFMIYVHSKMMIVD 675          
The following BLAST results are available for this feature:
BLAST of CX292223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
PLDA1_RICCO4.234e-11987.18Phospholipase D alpha 1 OS=Ricinus communis GN=PLD... [more]
PLDA1_VIGUN4.382e-11686.32Phospholipase D alpha 1 OS=Vigna unguiculata GN=PL... [more]
PLDA1_ARATH6.327e-11584.19Phospholipase D alpha 1 OS=Arabidopsis thaliana GN... [more]
PLDA1_BRAOC1.079e-11485.04Phospholipase D alpha 1 OS=Brassica oleracea var. ... [more]
PLDA2_ARATH3.140e-11483.83Phospholipase D alpha 2 OS=Arabidopsis thaliana GN... [more]
PLDA2_BRAOC2.035e-11383.33Phospholipase D alpha 2 OS=Brassica oleracea var. ... [more]
PLDA1_TOBAC3.839e-11283.76Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PL... [more]
PLDA1_MAIZE5.013e-11282.48Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 S... [more]
PLDA1_ORYSJ5.543e-11180.34Phospholipase D alpha 1 OS=Oryza sativa subsp. jap... [more]
PLDA2_ORYSJ1.727e-10477.35Phospholipase D alpha 2 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionC04011H09SK FlavFr1 Citrus clementina cDNA clone C04011H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292223 ID=CX292223; Name=CX292223; organism=Citrus clementina; type=EST; length=704bp
AGGATGTTCTCGTGCATCTGAGAGAACTTGGAGACATCATTATTCCCCCC
TCTCCAGTTATGTACCCAGATGACCATGACACATGGAATGTGCAATTGTT
TAGATCCATTGATGGTGGGGCTGCATTTGGCTTCCCAGAGACGCCTGAAG
ATGCAGCTAGAGCTGGGCTTGTTAGTGGGAAGGATAATATCATTGACCGC
AGCATTCAGGATGCTTATATCCATGCTATCCGGCGTGCAAAGAATTTCAT
CTATATTGAAAATCAGTATTTCCTTGGAAGCTCTTTTGCTTGGAGTGCTG
ATGGCATTAAGCCTGAGGAAATTAATGCTTTGCATCTGATTCCAAAGGAG
CTCTCACTTAAGATTGTTAGTAAGATTGAGGCTGGGGAGAGATTTACCGT
ATATATTGTTGTCCCAATGTGGCCAGAGGGGTTTCCAGAGTCTGGTTCAG
TTCAGGCAATATTAGATTGGCAGAGAAGGACAATGGATATGATGTATAAG
GATGTTGTTCAGGCTCTTAGAGCANAGGGCATTATGGAAGATCCCAGGAA
CTATTTGACATTCTTCTGCCTTGGGAATCGGGAGGTGAAGAGGAGTGGTG
AATATGAACCTGCAGAAAGGCCGGAGGATGATTCANACTATCTTAGAGCT
CAGGAAGCTCGACGCTTCATGATCTACGTTCATGCCAAGATGATGATTGT
TGAT
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