CX292231

Overview
NameCX292231
Unique NameCX292231
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9338 contig Ccv1_Contig9338:989..1675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX292231 vs. ExPASy Swiss-Prot
Match: RFS2_ARATH (Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2)

HSP 1 Score: 416.387 bits (1069), Expect = 7.165e-116
Identity = 196/229 (85.59%), Postives = 211/229 (92.14%), Query Frame = 1
Query:    1 NSKFQKKCQISEQVSGLKHVVYESKQNYNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARA 687
            N+KFQK  Q   QVSGLK VV  +KQ +NVK VY WHALAGYWGGVKPAA GMEHYD+ALAYPV SPGV+GNQPDIVMDSLAVHGLGLV+PKKVFNFYNELH+YLASCG+DGVKVDVQNIIETLGAG GGRVSLTRSY QALEASIARNF DNGCISCMCHNTDG+YS+KQTA++RASDD+YPRDPASHTIHI+SVAYN+LFLGEFMQPDWDMFHSLHP AEYH AARA
Sbjct:  270 NAKFQKSDQKDTQVSGLKSVVDNAKQRHNVKQVYAWHALAGYWGGVKPAASGMEHYDSALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVNPKKVFNFYNELHSYLASCGIDGVKVDVQNIIETLGAGLGGRVSLTRSYQQALEASIARNFTDNGCISCMCHNTDGLYSAKQTAIVRASDDFYPRDPASHTIHIASVAYNSLFLGEFMQPDWDMFHSLHPTAEYHAAARA 498          
BLAST of CX292231 vs. ExPASy Swiss-Prot
Match: RFS1_ARATH (Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 7.450e-97
Identity = 165/233 (70.82%), Postives = 196/233 (84.12%), Query Frame = 1
Query:    1 NSKFQKKCQISEQVS----GLKHVVYESKQNYNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARA 687
            N KFQK  +   +V      L HV+ + K N ++KYVYVWHA+ GYWGGVKP   GMEHY++ +AYPV+SPGVM ++    ++S+  +GLGLV+P+KVF+FYN+LH+YLAS GVDGVKVDVQNI+ETLGAGHGGRV L + YHQALEASI+RNFPDNG ISCM HNTDG+YS+K+TAVIRASDD++PRDPASHTIHI+SVAYNTLFLGEFMQPDWDMFHSLHP AEYH AARA
Sbjct:  270 NHKFQKDGKEGHRVDDPSLSLGHVITDIKSNNSLKYVYVWHAITGYWGGVKPGVSGMEHYESKVAYPVSSPGVMSSENCGCLESITKNGLGLVNPEKVFSFYNDLHSYLASVGVDGVKVDVQNILETLGAGHGGRVKLAKKYHQALEASISRNFPDNGIISCMSHNTDGLYSAKKTAVIRASDDFWPRDPASHTIHIASVAYNTLFLGEFMQPDWDMFHSLHPMAEYHAAARA 502          
BLAST of CX292231 vs. ExPASy Swiss-Prot
Match: RFS6_ARATH (Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana GN=RFS6 PE=2 SV=2)

HSP 1 Score: 317.39 bits (812), Expect = 4.530e-86
Identity = 147/229 (64.19%), Postives = 180/229 (78.60%), Query Frame = 1
Query:    1 NSKFQKKCQISEQVSGLKHVVYESKQNYNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARA 687
            N KF+KK    +   G+K++V  +K+ + +KYVYVWHA+ GYWGGV+P     E Y + + YP  S GV+ N P    D + + GLGLV PKKV+ FYNELH+YLA  GVDGVKVDVQ ++ETLG G GGRV LTR +HQAL++S+A+NFPDNGCI+CM HNTD +Y SKQ AVIRASDD+YPRDP SHTIHI+SVAYN++FLGEFMQPDWDMFHS+HPAAEYH +ARA
Sbjct:  275 NEKFKKK---DDPNVGIKNIVKIAKEKHGLKYVYVWHAITGYWGGVRPG----EEYGSVMKYPNMSKGVVENDPTWKTDVMTLQGLGLVSPKKVYKFYNELHSYLADAGVDGVKVDVQCVLETLGGGLGGRVELTRQFHQALDSSVAKNFPDNGCIACMSHNTDALYCSKQAAVIRASDDFYPRDPVSHTIHIASVAYNSVFLGEFMQPDWDMFHSVHPAAEYHASARA 496          
BLAST of CX292231 vs. ExPASy Swiss-Prot
Match: RFS5_ARATH (Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana GN=RFS5 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.742e-43
Identity = 92/244 (37.70%), Postives = 142/244 (58.20%), Query Frame = 1
Query:    7 KFQKKCQISEQVS-------GLKHVVYESKQNYN-VKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIY-SSKQTAVIRASDDYYPRDPAS--------HTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARA 687
            KF++  +  + VS       G+K  V + K  ++ V Y+YVWHAL GYWGG++P A  +    + +  P  SPG+     D+ +D +   G+G   P     FY  LH++L + G+DGVKVDV +I+E L   +GGRV L ++Y +AL +S+ ++F  NG I+ M H  D ++  ++  ++ R  DD++  DP+            H+   AYN+L++G F+QPDWDMF S HP AE+H A+RA
Sbjct:  294 KFEENHKFKDYVSPKDQNDVGMKAFVRDLKDEFSTVDYIYVWHALCGYWGGLRPEAPALP--PSTIIRPELSPGLKLTMEDLAVDKIIETGIGFASPDLAKEFYEGLHSHLQNAGIDGVKVDVIHILEMLCQKYGGRVDLAKAYFKALTSSVNKHFNGNGVIASMEHCNDFMFLGTEAISLGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIQPDWDMFQSTHPCAEFHAASRA 535          
BLAST of CX292231 vs. ExPASy Swiss-Prot
Match: RFS_ORYSJ (Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica GN=RFS PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.194e-43
Identity = 91/237 (38.40%), Postives = 136/237 (57.38%), Query Frame = 1
Query:    7 KFQKKCQISEQVSGLKHVVYESKQNY-NVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTD-GIYSSKQTAVIRASDDYYPRDPAS--------HTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARA 687
            KFQ+  +  E   G+   V E K  +  V+ VYVWHAL GYWGG++P A G+      +  P  SPG+     D+ +D +  +G+GLV P++    Y  LH++L + G+DGVKVDV +++E +   +GGRV L ++Y   L  S+ R+F  NG I+ M H  D  +  ++  A+ R  DD++  DP+            H+   AYN+L++G F+ PDWDMF S HP A +H A+RA
Sbjct:  299 KFQENYKFREYKGGMGGFVREMKAAFPTVEQVYVWHALCGYWGGLRPGAPGLP--PAKVVAPRLSPGLQRTMEDLAVDKIVNNGVGLVDPRRARELYEGLHSHLQASGIDGVKVDVIHLLEMVCEEYGGRVELAKAYFAGLTESVRRHFNGNGVIASMEHCNDFMLLGTEAVALGRVGDDFWCTDPSGDPDGTFWLQGCHMVHCAYNSLWMGAFIHPDWDMFQSTHPCAAFHAASRA 533          
BLAST of CX292231 vs. ExPASy Swiss-Prot
Match: RFS_PEA (Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.089e-43
Identity = 89/224 (39.73%), Postives = 136/224 (60.71%), Query Frame = 1
Query:   46 GLKHVVYESKQNY-NVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTD-GIYSSKQTAVIRASDDYYPRDPAS--------HTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARA 687
            GL   V + K+ + +V+ VYVWHAL GYWGGV+P   GM   +  +  P  SPGV     D+ +D +  +G+GLV P      ++ +H++L S G+DGVKVDV +++E L   +GGRV L ++Y++AL +S+ ++F  NG I+ M H  D  +  ++  ++ R  DD++  DP+            H+   AYN+L++G F+ PDWDMF S HP AE+H A+RA
Sbjct:  327 GLVGFVRDLKEEFRSVESVYVWHALCGYWGGVRPKVCGMP--EAKVVVPKLSPGVKMTMEDLAVDKIVENGVGLVPPNLAQEMFDGIHSHLESAGIDGVKVDVIHLLELLSEEYGGRVELAKAYYKALTSSVNKHFKGNGVIASMEHCNDFFLLGTEAISLGRVGDDFWCCDPSGDPNGTYWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRA 548          
BLAST of CX292231 vs. ExPASy Swiss-Prot
Match: STSYN_PEA (Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.426e-39
Identity = 82/206 (39.81%), Postives = 121/206 (58.74%), Query Frame = 1
Query:   97 VYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIY-SSKQTAVIRASDDYYPRDPAS--------HTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARA 687
            VYVWHAL G WGGV+P      H DT +     SPG+ G   D+ +  ++   LGLVHP +    Y+ +H+YLA  G+ GVKVDV + +E +   +GGRV L + Y++ L  SI +NF  NG I+ M H  D  +  +KQ ++ R  DD++ +DP            +H+   +YN+L++G+ +QPDWDMF S H  A++H  +RA
Sbjct:  401 VYVWHALCGAWGGVRPETT---HLDTKIVPCKLSPGLDGTMEDLAVVEISKASLGLVHPSQANELYDSMHSYLAESGITGVKVDVIHSLEYVCDEYGGRVDLAKVYYEGLTKSIVKNFNGNGMIASMQHCNDFFFLGTKQISMGRVGDDFWFQDPNGDPMGSFWLQGVHMIHCSYNSLWMGQMIQPDWDMFQSDHVCAKFHAGSRA 603          
BLAST of CX292231 vs. ExPASy Swiss-Prot
Match: RFS4_ARATH (Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis thaliana GN=RFS4 PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 4.593e-38
Identity = 79/206 (38.35%), Postives = 119/206 (57.77%), Query Frame = 1
Query:   97 VYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIY-SSKQTAVIRASDDYYPRDPAS--------HTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARA 687
            +YVWHAL G W GV+P  + M      +A    SP +     D+ +D +   G+GLVHP K   FY+ +H+YLAS GV G K+DV   +E+L   HGGRV L ++Y+  L  S+ +NF     I+ M    +  + ++KQ ++ R  DD++ +DP            +H+   +YN++++G+ +QPDWDMF S H  AEYH A+RA
Sbjct:  416 IYVWHALCGAWNGVRP--ETMMDLKAKVAPFELSPSLGATMADLAVDKVVEAGIGLVHPSKAHEFYDSMHSYLASVGVTGAKIDVFQTLESLAEEHGGRVELAKAYYDGLTESMIKNFNGTDVIASMQQCNEFFFLATKQISIGRVGDDFWWQDPYGDPQGVYWLQGVHMIHCSYNSIWMGQMIQPDWDMFQSDHVCAEYHAASRA 619          
The following BLAST results are available for this feature:
BLAST of CX292231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
RFS2_ARATH7.165e-11685.59Probable galactinol--sucrose galactosyltransferase... [more]
RFS1_ARATH7.450e-9770.82Probable galactinol--sucrose galactosyltransferase... [more]
RFS6_ARATH4.530e-8664.19Probable galactinol--sucrose galactosyltransferase... [more]
RFS5_ARATH4.742e-4337.70Probable galactinol--sucrose galactosyltransferase... [more]
RFS_ORYSJ6.194e-4338.40Galactinol--sucrose galactosyltransferase OS=Oryza... [more]
RFS_PEA8.089e-4339.73Galactinol--sucrose galactosyltransferase OS=Pisum... [more]
STSYN_PEA5.426e-3939.81Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 S... [more]
RFS4_ARATH4.593e-3838.35Probable galactinol--sucrose galactosyltransferase... [more]
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Properties
Property NameValue
Genbank descriptionC04013A05SK FlavFr1 Citrus clementina cDNA clone C04013A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292231 ID=CX292231; Name=CX292231; organism=Citrus clementina; type=EST; length=687bp
AATTCAAAATTCCAAAAGAAGTGCCAGATTAGTGAGCAGGTCTCAGGCCT
CAAGCACGTTGTATATGAATCCAAGCAGAATTACAATGTGAAGTATGTGT
ATGTATGGCATGCTTTAGCTGGTTACTGGGGCGGAGTAAAACCCGCTGCT
GATGGTATGGAGCATTATGATACTGCACTAGCATACCCTGTTACGTCGCC
AGGTGTGATGGGCAACCAACCTGACATAGTTATGGACAGCCTTGCTGTTC
ATGGCTTGGGTTTGGTGCATCCAAAGAAGGTGTTCAACTTCTACAATGAG
CTTCATGCTTACCTGGCATCCTGTGGAGTAGATGGAGTAAAAGTTGATGT
GCAAAACATTATTGAAACCCTTGGTGCTGGTCATGGTGGTAGAGTTTCTC
TTACTCGCAGCTATCACCAGGCATTAGAGGCCTCAATCGCACGGAACTTC
CCTGACAATGGATGCATTTCCTGCATGTGTCATAATACTGATGGGATCTA
TAGCTCCAAGCAGACTGCAGTGATTAGAGCTTCCGATGACTACTACCCAC
GGGACCCAGCTTCCCATACCATCCATATTTCTTCTGTCGCTTACAACACT
CTTTTCCTCGGAGAATTTATGCAGCCTGACTGGGATATGTTCCATAGTTT
ACACCCAGCTGCAGAGTATCATGGTGCGGCTCGTGCA
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