CX292238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX292238 vs. ExPASy Swiss-Prot
Match: RL362_ARATH (60S ribosomal protein L36-2 OS=Arabidopsis thaliana GN=RPL36B PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 2.143e-38 Identity = 80/101 (79.21%), Postives = 89/101 (88.12%), Query Frame = 1 Query: 16 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGG--EKKK 312 VGLNKGH+VT++EL PRP RKGKTSKR F+R +I+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+ LRK R+ GGG EKKK Sbjct: 12 VGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112
BLAST of CX292238 vs. ExPASy Swiss-Prot
Match: RL363_ARATH (60S ribosomal protein L36-3 OS=Arabidopsis thaliana GN=RPL36C PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 2.798e-38 Identity = 80/101 (79.21%), Postives = 89/101 (88.12%), Query Frame = 1 Query: 16 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGG--EKKK 312 VGLNKGH+VTK+E PPRP +RKGKTSKR F+R +I+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+ LRK R+ G G EKKK Sbjct: 8 VGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGAGASEKKK 108
BLAST of CX292238 vs. ExPASy Swiss-Prot
Match: RL361_ARATH (60S ribosomal protein L36-1 OS=Arabidopsis thaliana GN=RPL36A PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 2.369e-37 Identity = 79/101 (78.22%), Postives = 87/101 (86.14%), Query Frame = 1 Query: 16 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGG---GEKK 309 VGLNKGH+VT++EL PRP RKGKTSKR F+R +IREVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+ LRK R+ GG EKK Sbjct: 12 VGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLGGAAAAEKK 112
BLAST of CX292238 vs. ExPASy Swiss-Prot
Match: RL36_ENTCP (60S ribosomal protein L36 OS=Enteromorpha compressa GN=RL36 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.148e-30 Identity = 67/96 (69.79%), Postives = 76/96 (79.17%), Query Frame = 1 Query: 16 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGGE 303 VGLNKGH VTKK PRP+ RKG S+RV VR V+REVAG+APYE+R+ ELLKVGKDKRALK+ KRKLGTH R KKKREEM+ LRK +A GE Sbjct: 6 VGLNKGHQVTKKAGTPRPSRRKGFLSQRVKKVRAVVREVAGWAPYERRVMELLKVGKDKRALKMCKRKLGTHMRGKKKREEMAGVLRKMQAASKGE 101
BLAST of CX292238 vs. ExPASy Swiss-Prot
Match: RL36_DAUCA (60S ribosomal protein L36 OS=Daucus carota GN=RPL36 PE=3 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 4.050e-29 Identity = 64/85 (75.29%), Postives = 71/85 (83.53%), Query Frame = 1 Query: 1 NSARGVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKRE 255 N+ VGLNKGHIVTKKEL PRP+DRKGKTSKR HFVR +IREVAGF PYEKRITELLKVGKDKRALKV + K+G H + K+ E Sbjct: 7 NTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRITELLKVGKDKRALKVRQEKVG-HSQESKEEE 90
BLAST of CX292238 vs. ExPASy Swiss-Prot
Match: RL36_IXOSC (60S ribosomal protein L36 OS=Ixodes scapularis GN=RpL36 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 7.149e-26 Identity = 58/98 (59.18%), Postives = 69/98 (70.41%), Query Frame = 1 Query: 16 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGGEKK 309 VGL KGH VTK E PRP+ RKG SK FVR +IREV GFAP+E+R ELLKV KDKRALK K++LGTH R K+KR+E+SN L R ++K Sbjct: 9 VGLGKGHKVTKNEYKPRPSRRKGALSKHTRFVRDLIREVCGFAPFERRAMELLKVSKDKRALKFIKKRLGTHLRGKRKRDELSNVLVAQRKAAAHKEK 106
BLAST of CX292238 vs. ExPASy Swiss-Prot
Match: RL36A_SCHPO (60S ribosomal protein L36-A OS=Schizosaccharomyces pombe GN=rpl36a PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 1.593e-25 Identity = 53/90 (58.89%), Postives = 75/90 (83.33%), Query Frame = 1 Query: 16 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 285 VGLNKG ++TK++LP RP+ RKG+ SKR FVR+++REVAGFAPYE+R+ EL++ +DKRA K+AK++LGT KRAK K EE+++ ++ SR Sbjct: 7 VGLNKGKVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAKKRLGTLKRAKGKIEELTSVIQSSR 96
BLAST of CX292238 vs. ExPASy Swiss-Prot
Match: RL36_XENTR (60S ribosomal protein L36 OS=Xenopus tropicalis GN=rpl36 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 7.905e-25 Identity = 56/90 (62.22%), Postives = 66/90 (73.33%), Query Frame = 1 Query: 16 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 285 VGLNKGH VTK PR R+G+ +K FVR +IREV GFAPYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN L R Sbjct: 9 VGLNKGHRVTKNVTKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRIGTHIRAKRKREELSNVLAAMR 98
BLAST of CX292238 vs. ExPASy Swiss-Prot
Match: RL36_XENLA (60S ribosomal protein L36 OS=Xenopus laevis GN=rpl36 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 7.905e-25 Identity = 56/90 (62.22%), Postives = 66/90 (73.33%), Query Frame = 1 Query: 16 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 285 VGLNKGH VTK PR R+G+ +K FVR +IREV GFAPYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN L R Sbjct: 9 VGLNKGHRVTKNVTKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRIGTHIRAKRKREELSNVLAAMR 98
BLAST of CX292238 vs. ExPASy Swiss-Prot
Match: RL36_PONAB (60S ribosomal protein L36 OS=Pongo abelii GN=RPL36 PE=3 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 1.032e-24 Identity = 56/90 (62.22%), Postives = 67/90 (74.44%), Query Frame = 1 Query: 16 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 285 VGLNKGH VTK PR + R+G+ +K FVR +IREV GFAPYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN L R Sbjct: 9 VGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98 The following BLAST results are available for this feature:
BLAST of CX292238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292238 ID=CX292238; Name=CX292238; organism=Citrus clementina; type=EST; length=483bpback to top |