CX292277

Overview
NameCX292277
Unique NameCX292277
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length659
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig408 contig Ccv1_Contig408:1..659. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX292277 vs. ExPASy Swiss-Prot
Match: NCPR_CATRO (NADPH--cytochrome P450 reductase OS=Catharanthus roseus GN=CPR PE=2 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 2.677e-93
Identity = 165/219 (75.34%), Postives = 183/219 (83.56%), Query Frame = 2
Query:    2 TVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFL 658
            TVEEA  LL L P+TYFSLH DKEDGTPL  S+LPP FPPC+LRTALT+Y                       EADRL++LASPAGKDEYAQ +VA+QRSLLEVM+EFPSAKPPLGVFFAAI PRLQPR+YSISSSPR+APSRIHVTCALVYEKTP GR+HKG+CSTWMKN++P+E+S DCSWAPIFVRQSNFKLPAD KVP+IMIGPGTGLAPFRGFL
Sbjct:  364 TVEEAERLLNLPPETYFSLHADKEDGTPLAGSSLPPPFPPCTLRTALTRYADLLNTPKKSALLALAAYASDPNEADRLKYLASPAGKDEYAQSLVANQRSLLEVMAEFPSAKPPLGVFFAAIAPRLQPRFYSISSSPRMAPSRIHVTCALVYEKTPGGRIHKGVCSTWMKNAIPLEESRDCSWAPIFVRQSNFKLPADPKVPVIMIGPGTGLAPFRGFL 582          
BLAST of CX292277 vs. ExPASy Swiss-Prot
Match: NCPR_PHAAU (NADPH--cytochrome P450 reductase OS=Phaseolus aureus PE=1 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 1.990e-80
Identity = 146/219 (66.67%), Postives = 168/219 (76.71%), Query Frame = 2
Query:    2 TVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFL 658
            TVEE   LLG + D +FSLHTDK+DGT LG S LPP   PCSLRTAL +Y                      ++ +RL+ L+SP GKDEY++W+V SQRSL+EVM+EFPSAKPPLGVFFAAI PRLQPRYYSISSSPR AP R+HVTCALVY  TPTGR+HKG+CSTWMKN++P EKS DCS APIF+R SNFKLP D  +PIIM+GPGTGLAPFRGFL
Sbjct:  341 TVEETGKLLGQNLDLFFSLHTDKDDGTSLGGSLLPPFPGPCSLRTALARYADLLNPPRKAALLALATHASEPSD-ERLKFLSSPQGKDEYSKWVVGSQRSLVEVMAEFPSAKPPLGVFFAAIAPRLQPRYYSISSSPRFAPQRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPSEKSQDCSSAPIFIRPSNFKLPVDHSIPIIMVGPGTGLAPFRGFL 558          
BLAST of CX292277 vs. ExPASy Swiss-Prot
Match: NCPR_DROME (NADPH--cytochrome P450 reductase OS=Drosophila melanogaster GN=Cpr PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.350e-36
Identity = 86/220 (39.09%), Postives = 124/220 (56.36%), Query Frame = 2
Query:    5 VEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLAS--PAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFL 658
            VE+   L     DT FSL     D +       P T+     RTALT Y                       E + LR +AS  P GK++Y  WI  + R+++ ++ +  S +PP+      ++PRLQPRYYSISSS ++ P+ +HVT  LV  KTPTGR++KG+ +T++KN  P  + ++    P+F+R+S F+LP   + PIIM+GPGTGLAPFRGF+
Sbjct:  335 VEKLGQLCNADLDTVFSLINTDTDSSKKHPFPCPTTY-----RTALTHYLEITAIPRTHILKELAEYCTDEKEKELLRSMASISPEGKEKYQSWIQDACRNIVHILEDIKSCRPPID-HVCELLPRLQPRYYSISSSAKLHPTDVHVTAVLVEYKTPTGRINKGVATTYLKNKQP--QGSEEVKVPVFIRKSQFRLPTKPETPIIMVGPGTGLAPFRGFI 546          
BLAST of CX292277 vs. ExPASy Swiss-Prot
Match: NCPR_MUSDO (NADPH--cytochrome P450 reductase OS=Musca domestica PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.929e-36
Identity = 85/220 (38.64%), Postives = 125/220 (56.82%), Query Frame = 2
Query:    5 VEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLAS--PAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFL 658
            VE+   L   + DT FSL     D +       P T+     RTALT Y                       + + LR++AS  P GK++Y  WI  S R+++ ++ +  S +PP+      ++PRLQPRYYSISSS ++ P+ +H+T  LV  +TPTGRV+KG+ +++MK   P   S      P+F+R+S F+LP  +++PIIM+GPGTGLAPFRGF+
Sbjct:  328 VEKLGKLCDANLDTVFSLINTDTDSSKKHPFPCPTTY-----RTALTHYLEITAIPRTHILKELAEYCSDEKDKEFLRNMASITPEGKEKYQNWIQNSSRNIVHILEDIKSCRPPID-HICELLPRLQPRYYSISSSSKLYPTNVHITAVLVQYETPTGRVNKGVATSYMKEKNP---SVGEVKVPVFIRKSQFRLPTKSEIPIIMVGPGTGLAPFRGFI 538          
BLAST of CX292277 vs. ExPASy Swiss-Prot
Match: NCPR_BOVIN (NADPH--cytochrome P450 reductase OS=Bos taurus GN=POR PE=2 SV=3)

HSP 1 Score: 142.51 bits (358), Expect = 1.825e-33
Identity = 78/221 (35.29%), Postives = 125/221 (56.56%), Query Frame = 2
Query:    5 VEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG--KDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFL 658
            V +   +LG   D   SL+   E+      S     FP P S RTALT Y                      TE ++LR +AS +G  K+ Y +W++ ++R +L ++ ++PS +PP+      ++PRLQ RYYSI+SS +V P+ +H+    V  +T TGR++KG+ ++W++   P  ++   +  P++VR+S F+LP  A  P+IM+GPGTG+APF GF+
Sbjct:  331 VNQLGEILGADLDIIMSLNNLDEE------SNKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPTEHEQLRKMASSSGEGKELYLRWVLEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYETKTGRINKGVATSWLRAKEPAGENGGRALVPMYVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFI 544          
BLAST of CX292277 vs. ExPASy Swiss-Prot
Match: NCPR_RABIT (NADPH--cytochrome P450 reductase OS=Oryctolagus cuniculus GN=POR PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.935e-33
Identity = 78/221 (35.29%), Postives = 122/221 (55.20%), Query Frame = 2
Query:    5 VEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG--KDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFL 658
            V +   +LG   D   SL+   E+      S     FP P S RTALT Y                       E ++LR +AS +G  K+ Y  W+V ++R +L ++ ++PS +PP+      ++PRLQ RYYSI+SS +V P+ +H+    V  +T  GR++KG+ ++W++   P  ++   +  P+FVR+S F+LP  A  P+IM+GPGTG+APF GF+
Sbjct:  332 VNQLGEILGADLDVVMSLNNLDEE------SNKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYAADPAEQEQLRKMASSSGEGKELYLSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYETKAGRLNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFI 545          
BLAST of CX292277 vs. ExPASy Swiss-Prot
Match: NCPR_PIG (NADPH--cytochrome P450 reductase OS=Sus scrofa GN=POR PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.545e-32
Identity = 76/220 (34.55%), Postives = 122/220 (55.45%), Query Frame = 2
Query:    5 VEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG--KDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFL 658
            V +   +LG   D   SL+   E+         P T+     RTALT Y                      +E ++LR +AS +G  K+ Y  W+V ++R +L ++ ++PS +PP+       +PRLQ RYYSI+SS +V P+ +H+   +V  +T +GRV+KG+ ++W++   P  ++   +  P+FVR+S F+LP  A  P+IM+GPGTG+APF GF+
Sbjct:  331 VNQLGEILGTDLDIVMSLNNLDEESNKRHPFPCPTTY-----RTALTYYLDITNPPRTNVLYELAQYASEPSEQEQLRKMASSSGEGKELYLSWVVEARRHILAILQDYPSLRPPID-HLCERLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKSGRVNKGVATSWLRAKEPAGENGRRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFI 544          
BLAST of CX292277 vs. ExPASy Swiss-Prot
Match: NCPR_HUMAN (NADPH--cytochrome P450 reductase OS=Homo sapiens GN=POR PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 2.018e-32
Identity = 78/221 (35.29%), Postives = 121/221 (54.75%), Query Frame = 2
Query:    5 VEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG--KDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFL 658
            V +   +LG   D   SL+   E+      S     FP P S RTALT Y                      +E + LR +AS +G  K+ Y  W+V ++R +L ++ + PS +PP+      ++PRLQ RYYSI+SS +V P+ +H+   +V  +T  GR++KG+ + W++   P  ++   +  P+FVR+S F+LP  A  P+IM+GPGTG+APF GF+
Sbjct:  331 VNQLGKILGADLDVVMSLNNLDEE------SNKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPAGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFI 544          
BLAST of CX292277 vs. ExPASy Swiss-Prot
Match: NCPR_RAT (NADPH--cytochrome P450 reductase OS=Rattus norvegicus GN=Por PE=1 SV=3)

HSP 1 Score: 137.117 bits (344), Expect = 7.667e-32
Identity = 73/220 (33.18%), Postives = 119/220 (54.09%), Query Frame = 2
Query:    5 VEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG--KDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFL 658
            V +   +LG   D   SL+   E+         P T+     RTALT Y                      +E + L  +AS +G  K+ Y  W+V ++R +L ++ ++PS +PP+      ++PRLQ RYYSI+SS +V P+ +H+    V  +  +GRV+KG+ ++W++   P  ++   +  P+FVR+S F+LP  +  P+IM+GPGTG+APF GF+
Sbjct:  331 VNQIGEILGADLDVIMSLNNLDEESNKKHPFPCPTTY-----RTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPFMGFI 544          
BLAST of CX292277 vs. ExPASy Swiss-Prot
Match: NCPR_MOUSE (NADPH--cytochrome P450 reductase OS=Mus musculus GN=Por PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.308e-31
Identity = 73/220 (33.18%), Postives = 118/220 (53.64%), Query Frame = 2
Query:    5 VEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG--KDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFL 658
            V +   +LG   D   SL+   E+         P T+     RTALT Y                      +E + L  +AS +G  K+ Y  W+V ++R +L ++ ++PS +PP+      ++PRLQ RYYSI+SS +V P+ +H+    V  +  +GRV+KG+ ++W++   P  ++   +  P+FVR+S F+LP     P+IM+GPGTG+APF GF+
Sbjct:  331 VNQIGEILGADLDVIMSLNNLDEESNKKHPFPCPTTY-----RTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEAKSGRVNKGVATSWLRTKEPAGENGRRALVPMFVRKSQFRLPFKPTTPVIMVGPGTGVAPFMGFI 544          
The following BLAST results are available for this feature:
BLAST of CX292277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
NCPR_CATRO2.677e-9375.34NADPH--cytochrome P450 reductase OS=Catharanthus r... [more]
NCPR_PHAAU1.990e-8066.67NADPH--cytochrome P450 reductase OS=Phaseolus aure... [more]
NCPR_DROME1.350e-3639.09NADPH--cytochrome P450 reductase OS=Drosophila mel... [more]
NCPR_MUSDO3.929e-3638.64NADPH--cytochrome P450 reductase OS=Musca domestic... [more]
NCPR_BOVIN1.825e-3335.29NADPH--cytochrome P450 reductase OS=Bos taurus GN=... [more]
NCPR_RABIT6.935e-3335.29NADPH--cytochrome P450 reductase OS=Oryctolagus cu... [more]
NCPR_PIG1.545e-3234.55NADPH--cytochrome P450 reductase OS=Sus scrofa GN=... [more]
NCPR_HUMAN2.018e-3235.29NADPH--cytochrome P450 reductase OS=Homo sapiens G... [more]
NCPR_RAT7.667e-3233.18NADPH--cytochrome P450 reductase OS=Rattus norvegi... [more]
NCPR_MOUSE1.308e-3133.18NADPH--cytochrome P450 reductase OS=Mus musculus G... [more]

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Properties
Property NameValue
Genbank descriptionC04013E05SK FlavFr1 Citrus clementina cDNA clone C04013E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292277 ID=CX292277; Name=CX292277; organism=Citrus clementina; type=EST; length=659bp
GACCGTGGAGGAGGCATTGTCATTATTAGGCCTATCACCAGACACTTATT
TTTCCCTTCATACTGATAAAGAGGATGGCACACCACTTGGTAAAAGCACC
TTGCCTCCCACTTTCCCACCGTGCTCTTTAAGAACAGCATTAACTAAATA
TGCTGATCTTTTGAGCTCCCCAAAGAAGTCTGCATTACTTGCCTTAGCAG
CTCATGCATCTGACCCCACTGAAGCAGATCGGTTAAGACATCTTGCATCA
CCTGCTGGAAAGGATGAATATGCACAATGGATTGTTGCAAGTCAGAGAAG
CCTTCTGGAGGTCATGAGTGAATTTCCTTCTGCCAAGCCCCCACTTGGTG
TCTTTTTTGCAGCAATTGTCCCACGTTTGCAACCAAGATATTATTCAATT
TCATCTTCTCCAAGGGTTGCACCATCTAGAATTCATGTTACCTGTGCTCT
GGTTTATGAGAAAACACCAACAGGACGTGTTCACAAAGGATTGTGCTCCA
CTTGGATGAAGAATTCTTTGCCAATGGAGAAAAGCAATGACTGCAGCTGG
GCACCCATTTTTGTTAGGCAATCAAACTTCAAACTCCCTGCAGATGCTAA
AGTGCCTATCATTATGATTGGCCCTGGCACTGGATTAGCTCCTTTCAGGG
GTTTCCTAC
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