CX292278

Overview
NameCX292278
Unique NameCX292278
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292278 vs. ExPASy Swiss-Prot
Match: AI5L2_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arabidopsis thaliana GN=DPBF3 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.447e-23
Identity = 85/218 (38.99%), Postives = 104/218 (47.71%), Query Frame = 3
Query:   18 LTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPTLGEMTLEDFLVQAGLFAEASVSPMDLDTVGVVT----------------------MQSFPEKMSLSP------------SSSIG----TLTPRRKR--DDNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRXXXXXXXXXXXXXXXXXXPSDSLQEPKYQLRRMSSASF 551
            LTL R LS KTV++VW +IQQ   K  G   +   ++PTLGEMTLED L++AG+  E          VG  +                      + S P+  +  P            SS +G    T TP RKR       EK++ERR +R IKNRESAARSRARKQAY +EL  KVSR                  PS    +PK QLRR SSA F
Sbjct:   82 LTLPRDLSKKTVDEVWKDIQQN--KNGGSAHERRDKQPTLGEMTLEDLLLKAGVVTETIPGSNHDGPVGGGSAGSGAGLGQNITQVGPWIQYHQLPSMPQPQAFMPYPVSDMQAMVSQSSLMGGLSDTQTPGRKRVASGEVVEKTVERRQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENERLRKQKEVEKILPSVPPPDPKRQLRRTSSAPF 297          
BLAST of CX292278 vs. ExPASy Swiss-Prot
Match: AI5L3_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 3 OS=Arabidopsis thaliana GN=DPBF4 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.210e-23
Identity = 78/200 (39.00%), Postives = 101/200 (50.50%), Query Frame = 3
Query:   18 LTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPTLGEMTLEDFLVQAGLFAEASVSPMDLDTVG----------------------VVTMQSFPEKMSLSPSSSIGTLTPRRKR-DDNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRXXXXXXXXXXXXXXXXXXPSDSLQEPKYQLRRMSSAS 548
            LTL R LS KTV++VW +IQQ  K   G    +  ++PTLGE+TLED L++AG+  E  V   ++  +                       V  MQ       LS +       P RKR      EK++ERR +R IKNRESAARSRARKQAY +EL  KVSR                  PS+   +PK++LRR +SAS
Sbjct:   67 LTLPRDLSKKTVDEVWRDIQQ-DKNGNGTSTTTTHKQPTLGEITLEDLLLRAGVVTETVVPQENVVNIASNGQWVEYHHQPQQQQGFMTYPVCEMQDMVMMGGLSDTPQ----APGRKRVAGEIVEKTVERRQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENEKLRRLKEVEKILPSEPPPDPKWKLRRTNSAS 261          
The following BLAST results are available for this feature:
BLAST of CX292278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
AI5L2_ARATH1.447e-2338.99ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arab... [more]
AI5L3_ARATH4.210e-2339.00ABSCISIC ACID-INSENSITIVE 5-like protein 3 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionC04013E06SK FlavFr1 Citrus clementina cDNA clone C04013E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292278 ID=CX292278; Name=CX292278; organism=Citrus clementina; type=EST; length=692bp
AATTCGGCACGAGGGGCCTGACATTGGCTAGGGCTTTGAGTGGTAAAACG
GTTGAGCAGGTCTGGAATGAAATCCAACAAGGTCAAAAGAAGAGGTATGG
GCAAGAGATGAAGAGCCATCAGAGGGAACCTACGCTAGGAGAAATGACTT
TGGAGGACTTCTTGGTACAAGCAGGGCTTTTTGCTGAAGCATCTGTTAGT
CCTATGGATTTGGACACGGTCGGGGTGGTGACAATGCAAAGTTTTCCCGA
AAAGATGAGCTTATCACCTTCCTCTTCAATTGGGACATTAACACCTCGGC
GGAAGAGAGATGACAATGCATTCGAGAAGAGTATTGAAAGGAGGCTTAGG
CGGAAGATAAAAAATAGGGAATCTGCTGCACGTTCACGAGCAAGAAAACA
GGCCTATCATAATGAGCTGGTCAGCAAGGTTTCACGATTAGAAGAGGAAA
ATTTGAAGCTCAAGAAAGAGAAGGAATTTGAGAAGATGCTGCCATCTGAT
TCCTTACAAGAACCAAAATATCAACTTCGAAGAATGAGTTCAGCCTCTTT
CTGATGTCAATTTACTGCTTGTTAGAGCTAGATTGTTTGAGTATGTAAGT
GGACCACTTTCTTTTGATCTTGTCATCAAGGCTTTGTGTTGCTTCTGCTG
CTGCTTCTCTTCACCAACTGGTTGGGAATCGCCTTTATGTAA
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