CX292282

Overview
NameCX292282
Unique NameCX292282
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5613 contig Ccv1_Contig5613:176..872. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX292282 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 1.543e-89
Identity = 163/228 (71.49%), Postives = 178/228 (78.07%), Query Frame = 2
Query:    2 TDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSRKNGSSKLDDWVLCRIYKKHSGSQK-PVSATSVXXXXXXXXXXXXXXXXHLDDVLESLPEIDDRFFALPRMNSLKTLQQEDNKVNNLQHLGSGNFDWASLAGLHSVP 682
            TDEELLVQYLCRKVAG HFSLQ+IG+IDLYKFDPW LPSKA+FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIIT +GR+VGIKKALVFY GKAPKGTKTNWIMHEYRL E SR +GSSKLDDWVLCRIYKK SGSQ+  V+                     LDDVL+S PEI D+ F LPRMNSL+T+              +GNFDWASLAGL+ +P
Sbjct:   23 TDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYAGKAPKGTKTNWIMHEYRLIEHSRSHGSSKLDDWVLCRIYKKTSGSQRQAVTPVQACREEHSTNGSSSSSSSQLDDVLDSFPEIKDQSFNLPRMNSLRTIL-------------NGNFDWASLAGLNPIP 237          
BLAST of CX292282 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.547e-81
Identity = 150/228 (65.79%), Postives = 171/228 (75.00%), Query Frame = 2
Query:    2 TDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSRKNGSSKLDDWVLCRIYKKHSGSQKPV---SATSVXXXXXXXXXXXXXXXXHLDDVLESL-PEIDDRFFALPRMNSLKTLQQE--DNKVNNLQHLGSGNFDWASLAG 667
            TDEEL+VQYLCRK AG  FSLQ+I EIDLYKFDPWVLP+KA+FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKII+TEG++VGIKKALVFY+GKAPKGTKTNWIMHEYRL EPSR+NGS+KLDDWVLCRIYKK S +QK V      +                 H +DVL+S   EID+R F     N + +L+ +  + K        + NFDWAS AG
Sbjct:   23 TDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQKQVYDNGIANAREFSNNGTSSTTSSSSHFEDVLDSFHQEIDNRNFQFSNPNRISSLRPDLTEQKTGFHGLADTSNFDWASFAG 250          
BLAST of CX292282 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 3.446e-81
Identity = 154/234 (65.81%), Postives = 174/234 (74.36%), Query Frame = 2
Query:    2 TDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSRKNGSSKLDDWVLCRIYKKHSGSQKPV--SATSVXXXXXXXXXXXXXXXXHLDDVLESLPEIDDRF--FALPRMNSLKTLQQE--DNKVNNLQHLG-SGNFDWASLAGLHSVP 682
            TDEEL+V+YLCRK AG  FSLQ+I EIDLYKFDPWVLPSKA+FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK+I+TEGR+VGIKKALVFY+GKAPKGTKTNWIMHEYRL EPSR+NGS+KLDDWVLCRIYKK + +QK    +  +                   DDVLESL EID+R   FA    N+L    +    N     Q L    +FDWA+L G +SVP
Sbjct:   23 TDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQTSAQKQAYNNLMTSGREYSNNGSSTSSSSHQYDDVLESLHEIDNRSLGFAAGSSNALPHSHRPVLTNHKTGFQGLAREPSFDWANLIGQNSVP 256          
BLAST of CX292282 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.533e-57
Identity = 105/153 (68.63%), Postives = 120/153 (78.43%), Query Frame = 2
Query:    2 TDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFE---PSRKNGSSKLDDWVLCRIYKKHSGSQKPVSA 451
            TDEEL++ YLCR+ AG   ++ II EIDLYKFDPW LP  A++GEKEWYFFSPRDRKYPNGSRPNR AGSGYWKATG DK + +  + V IKKALVFY GKAPKG KTNWIMHEYRL +    +RK  S +LDDWVLCRIY K  G +KP +A
Sbjct:   18 TDEELVMHYLCRRCAGLPIAVPIIAEIDLYKFDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGSP-KPVAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGGLEKPPAA 169          
BLAST of CX292282 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.837e-56
Identity = 103/152 (67.76%), Postives = 117/152 (76.97%), Query Frame = 2
Query:    2 TDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEG--RKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFE----PSRKNGSSKLDDWVLCRIYKKHSGSQK 439
            TDEEL+V YLCRKVA Q   + II E+DLYK DPW LP KA+FG KEWYFF+PRDRKYPNGSRPNR AG GYWKATG DK +  +G  R VGIKKALVFY GKAP+G KT+WIMHEYRL +    P  K GS KLD+WVLCR+Y K +  +K
Sbjct:   30 TDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGRKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNKKNNWEK 181          
BLAST of CX292282 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 1.904e-55
Identity = 103/150 (68.67%), Postives = 116/150 (77.33%), Query Frame = 2
Query:    2 TDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSR----KNGSSKLDDWVLCRIYKKHSGSQK 439
            TDEEL++ YLCRK A Q  ++ II EIDLYK+DPW LP  A++GEKEWYFFSPRDRKYPNGSRPNR AGSGYWKATG DK I    + VGIKKALVFY GKAPKG KTNWIMHEYRL +  R    K  S +LDDWVLCRIY K   +++
Sbjct:   16 TDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLP-KPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATER 164          
BLAST of CX292282 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 9.780e-52
Identity = 98/157 (62.42%), Postives = 116/157 (73.89%), Query Frame = 2
Query:    2 TDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSR-----KNGSSKLDDWVLCRIYKKHSGSQKPVSATS 457
            TDEEL+  YLCR+ A +  ++ +I EIDLYKF+PW LP  A++GEKEWYFFS RDRKYPNGSRPNR AG+GYWKATG DK I  + + +GIKKALVFY GKAPKG KTNWIMHEYRL    R     K  + +LDDWVLCRIY K    +K + A +
Sbjct:   59 TDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPI-GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKGTMEKYLPAAA 214          
BLAST of CX292282 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.846e-51
Identity = 98/156 (62.82%), Postives = 117/156 (75.00%), Query Frame = 2
Query:    2 TDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK-IITTEG---RKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEP--------SRKNGSSKLDDWVLCRIYKKHSGS 433
            TDEEL++ YL RK       + II ++DLYKFDPW LP+KA FGE+EWYFFSPRDRKYPNG+RPNR A SGYWKATGTDK +I+T G   +KVG+KKALVFY GK PKG K++WIMHEYRL +           K  S +LDDWVLCRIYKK++ +
Sbjct:   26 TDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKKNNST 181          
BLAST of CX292282 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.339e-51
Identity = 93/149 (62.42%), Postives = 111/149 (74.50%), Query Frame = 2
Query:    2 TDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFE----PSRKNGSSKLDDWVLCRIYKKHSGSQ 436
            TDEEL+V YL  +   +   + II E+D+YKFDPW LP K  FGE EWYFFSPR+RKYPNG RPNR A SGYWKATGTDK I +    VG+KKALVFY G+ PKG KT+WIMHEYRL +     +++NGS +LD+WVLCRIYKK   S+
Sbjct:   18 TDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKRGASK 166          
BLAST of CX292282 vs. ExPASy Swiss-Prot
Match: NAC71_ORYSJ (NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.367e-50
Identity = 94/150 (62.67%), Postives = 108/150 (72.00%), Query Frame = 2
Query:    2 TDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSRKNGSSK----------LDDWVLCRIYKK 421
            TD+EL++ YLCRK  G   +  +I E+DLYKF+PW LP +A+ GEKEWYFFSPRDRKYPNG RPNR AG+GYWKATG DK + +  R V IKKALVFY GK PKG KTNWIMHEYRL +  R   + K          LDDWVLCRIY K
Sbjct:   18 TDDELVMYYLCRKCGGLPLAAPVIAEVDLYKFNPWDLPERAMGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPVGSP-RAVAIKKALVFYAGKPPKGVKTNWIMHEYRLADVDRSAAARKLSKSSHNALRLDDWVLCRIYNK 166          
The following BLAST results are available for this feature:
BLAST of CX292282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC72_ARATH1.543e-8971.49NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC19_ARATH1.547e-8165.79NAC domain-containing protein 19 OS=Arabidopsis th... [more]
NAC55_ARATH3.446e-8165.81NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NAC48_ORYSJ4.533e-5768.63NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NAC68_ORYSJ3.837e-5667.76NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC2_ARATH1.904e-5568.67NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NA102_ARATH9.780e-5262.42NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC18_ARATH2.846e-5162.82NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NAC29_ARATH6.339e-5162.42NAC domain-containing protein 29 OS=Arabidopsis th... [more]
NAC71_ORYSJ5.367e-5062.67NAC domain-containing protein 71 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionC04013E10SK FlavFr1 Citrus clementina cDNA clone C04013E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292282 ID=CX292282; Name=CX292282; organism=Citrus clementina; type=EST; length=697bp
GACTGATGAGGAACTTCTAGTTCAATATCTCTGTCGCAAAGTTGCAGGGC
AACATTTTTCGCTGCAAATTATCGGTGAAATAGATTTGTACAAGTTTGAC
CCATGGGTTCTACCAAGCAAGGCAATTTTTGGTGAGAAAGAATGGTACTT
TTTCAGCCCCAGGGATAGAAAATATCCAAACGGGTCCCGACCCAACAGAG
TAGCCGGGTCCGGGTATTGGAAGGCCACAGGCACCGACAAGATTATCACA
ACTGAAGGTCGTAAGGTTGGTATCAAAAAGGCTCTTGTTTTTTACGTAGG
CAAAGCTCCAAAAGGCACCAAAACCAATTGGATCATGCACGAATATCGAC
TCTTTGAACCTTCTCGCAAAAATGGCAGCTCCAAGTTAGATGATTGGGTT
CTGTGCAGAATCTATAAGAAGCATTCAGGTTCCCAAAAACCAGTGTCAGC
AACAAGTGTTTCTTCAAGCAAAGAACACAGTAATGGTTCTTGTTCATCTT
CATCTTCTCATCTTGATGATGTGCTCGAGTCTTTACCTGAAATTGATGAC
CGATTTTTCGCTTTGCCACGCATGAACTCACTCAAGACTTTACAGCAAGA
AGACAACAAGGTTAACAATTTGCAGCATCTGGGGTCGGGTAATTTTGACT
GGGCGAGTCTTGCGGGTCTTCATTCGGTCCCCCGATTCGTCTCCGCT
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