CX292284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292284 vs. ExPASy Swiss-Prot
Match: ATG8F_ARATH (Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.848e-32 Identity = 66/82 (80.49%), Postives = 73/82 (89.02%), Query Frame = 3 Query: 174 SSLPECENYRYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGSHIP 419 S +P + +YLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPP GA+MS++YEEKKD+DGFLYVTYSGENTFG P Sbjct: 40 SDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFGFGSP 121
BLAST of CX292284 vs. ExPASy Swiss-Prot
Match: ATG8E_ARATH (Autophagy-related protein 8e OS=Arabidopsis thaliana GN=ATG8E PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.120e-31 Identity = 63/79 (79.75%), Postives = 73/79 (92.41%), Query Frame = 3 Query: 174 SSLPECENYRYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 410 S +P + +YLVP+DLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTG +MS++YE+KKDEDGFLY+TYSGENTFG+ Sbjct: 41 SEVPNIDKKKYLVPSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFGA 119
BLAST of CX292284 vs. ExPASy Swiss-Prot
Match: ATG8G_ARATH (Autophagy-related protein 8g OS=Arabidopsis thaliana GN=ATG8G PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.462e-31 Identity = 65/79 (82.28%), Postives = 72/79 (91.14%), Query Frame = 3 Query: 174 SSLPECENYRYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 410 S +P + +YLVPADLTVGQFVYVIRKRI+LSAEKAIFIFVDNVLPPTGA+MS IY+E K+EDGFLYVTYSGENTFGS Sbjct: 40 SDIPNIDKKKYLVPADLTVGQFVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVTYSGENTFGS 118
BLAST of CX292284 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 9.479e-31 Identity = 63/78 (80.77%), Postives = 70/78 (89.74%), Query Frame = 3 Query: 174 SSLPECENYRYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 407 S +P+ + +YLVPADLTVGQFVYV+RKRIKLSAEKAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG Sbjct: 40 SDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
BLAST of CX292284 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica GN=ATG8C PE=3 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 9.479e-31 Identity = 63/78 (80.77%), Postives = 70/78 (89.74%), Query Frame = 3 Query: 174 SSLPECENYRYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 407 S +P+ + +YLVPADLTVGQFVYV+RKRIKLSAEKAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG Sbjct: 40 SDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
BLAST of CX292284 vs. ExPASy Swiss-Prot
Match: ATG8A_ARATH (Autophagy-related protein 8a OS=Arabidopsis thaliana GN=ATG8A PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.112e-30 Identity = 62/79 (78.48%), Postives = 70/79 (88.61%), Query Frame = 3 Query: 174 SSLPECENYRYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 410 S +P+ + +YLVPADLTVGQFVYV+RKRIKL AEKAIF+FV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFGS Sbjct: 40 SDVPDIDKKKYLVPADLTVGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGS 118
BLAST of CX292284 vs. ExPASy Swiss-Prot
Match: ATG8_YARLI (Autophagy-related protein 8 OS=Yarrowia lipolytica GN=ATG8 PE=3 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 2.758e-30 Identity = 63/78 (80.77%), Postives = 71/78 (91.03%), Query Frame = 3 Query: 174 SSLPECENYRYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 407 S +P + +YLVPADLTVGQFVYVIRKRIKLS+E+AIFIFVD+VLPPT A+MS+IYEE KDEDGFLYVTYSGENTFG Sbjct: 39 SDIPVIDKKKYLVPADLTVGQFVYVIRKRIKLSSERAIFIFVDDVLPPTAALMSSIYEEHKDEDGFLYVTYSGENTFG 116
BLAST of CX292284 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica GN=ATG8B PE=3 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 3.602e-30 Identity = 62/78 (79.49%), Postives = 69/78 (88.46%), Query Frame = 3 Query: 174 SSLPECENYRYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 407 S +P+ + +YLVPADLTVGQFVYV+RKRIKLS EKAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG Sbjct: 40 SDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
BLAST of CX292284 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.602e-30 Identity = 62/78 (79.49%), Postives = 69/78 (88.46%), Query Frame = 3 Query: 174 SSLPECENYRYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 407 S +P+ + +YLVPADLTVGQFVYV+RKRIKLS EKAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG Sbjct: 40 SDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
BLAST of CX292284 vs. ExPASy Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.704e-30 Identity = 62/78 (79.49%), Postives = 70/78 (89.74%), Query Frame = 3 Query: 174 SSLPECENYRYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 407 S +P+ + +YLVPADLTVGQFVYV+RKRIKLS EKAIFIFV N+LPPT AIMSAIYEE KDEDGFLY++YSGENTFG Sbjct: 40 SDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117 The following BLAST results are available for this feature:
BLAST of CX292284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292284 ID=CX292284; Name=CX292284; organism=Citrus clementina; type=EST; length=606bpback to top |