CX292288
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292288 vs. ExPASy Swiss-Prot
Match: PP208_ARATH (Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidopsis thaliana GN=At3g02490 PE=2 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.554e-65 Identity = 121/233 (51.93%), Postives = 170/233 (72.96%), Query Frame = 3 Query: 6 VLDEMRSKGYEMEMETCVKVLGRFSERNMVKEAVDLYEFAMA--CKNKPSVNCCTFLLRKIVVSKQLDMRLFSKVVRVFRENGNVLTDAMLNSVLKALISVGRMGECNKILKAMEEGGFIASSNMKSKIAFRLSSAGKKDEANEFMDHMEASGSDVGDKMWVSLIKGHCVAGDLDKAADCFQKMVEKEGTSHAGYAIDLLVNTYCSKNRAIDACKFVHNCVREYDLKPWHTTY 698 +++E+RS GYEMEMET V+V RF + M+KEAV+L+EFAMA N P+ +CC+ LL+KIV +K+LDM LF++ ++ + NGNV+ D ML VLK+L SV R G+ N++LKAM EGG++ S +++S IA LS GKKDEANE ++ MEASG+ + DK SL++GHC A DL++A++CF+KM+ KEG S+AGYA + LV YC+ +A D K V++ LKPWH+TY Sbjct: 303 MIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVELFEFAMAGSISNTPTPHCCSLLLKKIVTAKKLDMDLFTRTLKAYTGNGNVVPDVMLQHVLKSLRSVDRFGQSNEVLKAMNEGGYVPSGDLQSVIASGLSRKGKKDEANELVNFMEASGNHLDDKAMASLVEGHCDAKDLEEASECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQARDVYKLFSELVKQNQLKPWHSTY 535
BLAST of CX292288 vs. ExPASy Swiss-Prot
Match: PP387_ARATH (Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidopsis thaliana GN=At5g15980 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.664e-59 Identity = 117/234 (50.00%), Postives = 167/234 (71.37%), Query Frame = 3 Query: 6 VLDEMRSKGYEMEMETCVKVLGRFSERNMVKEAVDLYEFAMA---CKNKPSVNCCTFLLRKIVVSKQLDMRLFSKVVRVFRENGNVLTDAMLNSVLKALISVGRMGECNKILKAMEEGGFIASSNMKSKIAFRLSSAGKKDEANEFMDHMEASGSDVGDKMWVSLIKGHCVAGDLDKAADCFQKMVEKEGTSHAGYAIDLLVNTYCSKNRAIDACKFVHNCVREYDLKPWHTTY 698 ++ EMRS GYE+E+ET V+V RF + ++KEAVDL+E AMA N P+ +C LL+KIV +K LDM LFS+ V+V+ +NGN LTD++L SVLK+L SV R+ + N++LK M+ GG++ S +M+S IA LS GKKDEA+EF+D ME+SG+++ DK SL++G+C +G+LD+A CF+KMV G S+A Y+ + LV YC+KN+ DA K + V + LKP H+TY Sbjct: 309 IVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTY 542
BLAST of CX292288 vs. ExPASy Swiss-Prot
Match: PP269_ARATH (Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidopsis thaliana GN=At3g48250 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.377e-36 Identity = 83/231 (35.93%), Postives = 129/231 (55.84%), Query Frame = 3 Query: 6 VLDEMRSKGYEMEMETCVKVLGRFSERNMVKEAVDLYEFAMACKNKPSVNCCTFLLRKIVVSKQLDMRLFSKVVRVFRENGNVLTDAMLNSVLKALISVGRMGECNKILKAMEEGGFIASSNMKSKIAFRLSSAGKKDEANEFMDHMEASGSDVGDKMWVSLIKGHCVAGDLDKAADCFQKMVEKEGTSHAGYAIDLLVNTYCSKNRAIDACKFVHNCVREYDLKPWHTTY 698 V+DEM++ GY+M+++T +KV +F + M+ E V LYE+ M KPS+ C+ LLR + S D+ L +V R + G L+ A+ + + ++L SVGR E +I KAM G+ + S++ F L A + +EA +D MEA G K W LI+GHC +LDKA CF M+EK G +D+L++ + N+ A F+ V+ ++KPW +TY Sbjct: 285 VVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEK-GFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTY 514 The following BLAST results are available for this feature:
BLAST of CX292288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX292288 ID=CX292288; Name=CX292288; organism=Citrus clementina; type=EST; length=698bpback to top |