CX292293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX292293 vs. ExPASy Swiss-Prot
Match: VSR1_ARATH (Vacuolar-sorting receptor 1 OS=Arabidopsis thaliana GN=VSR1 PE=1 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 8.080e-29 Identity = 61/93 (65.59%), Postives = 73/93 (78.49%), Query Frame = 2 Query: 2 ACKGFDEVDLSFKSRPGGLPTFLLVDRGDCYFTLKAWNAQKGGAAAILVADDKTEPLITMDTPEEENADAEYLKTSPFPQPL-*QIFGCSIKS 277 ACK + + D+SFKS+PG LPTF+L+DRGDCYFTLKAW AQ+ GAAAILVAD K EPLITMDTPEE+ +DA+YL+ P L + G SIKS Sbjct: 69 ACKSYSDFDISFKSKPGRLPTFVLIDRGDCYFTLKAWIAQQAGAAAILVADSKAEPLITMDTPEEDKSDADYLQNITIPSALITKTLGDSIKS 161
BLAST of CX292293 vs. ExPASy Swiss-Prot
Match: VSR2_ARATH (Vacuolar-sorting receptor 2 OS=Arabidopsis thaliana GN=VSR2 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.087e-27 Identity = 54/82 (65.85%), Postives = 66/82 (80.49%), Query Frame = 2 Query: 2 ACKGFDEVDLSFKSRPGGLPTFLLVDRGDCYFTLKAWNAQKGGAAAILVADDKTEPLITMDTPEEENADAEYLKTSPFPQPL 247 ACK FD+ ++SF+SR GLPTF+LVDRGDCYFTLKAWNAQ+ GAA ILVAD++ E LITMD PE+E +DA+YL+ P L Sbjct: 73 ACKNFDDFEISFRSRVAGLPTFVLVDRGDCYFTLKAWNAQRAGAATILVADNRPEQLITMDAPEDETSDADYLQNITIPSAL 154 HSP 2 Score: 22.7126 bits (47), Expect = 4.087e-27 Identity = 9/11 (81.82%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 220 QNITIPSALIA 252 QNITIPSAL++ Sbjct: 146 QNITIPSALVS 156
BLAST of CX292293 vs. ExPASy Swiss-Prot
Match: VSR4_ARATH (Vacuolar-sorting receptor 4 OS=Arabidopsis thaliana GN=VSR4 PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 2.433e-25 Identity = 51/82 (62.20%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 2 ACKGFDEVDLSFKSRPGGLPTFLLVDRGDCYFTLKAWNAQKGGAAAILVADDKTEPLITMDTPEEENADAEYLKTSPFPQPL 247 +CK F + +SFKS+PG LPTFLLVDRGDC+F LK WNAQK GA+A+LVAD+ EPLITMDTPEE+ + A+Y++ P L Sbjct: 74 SCKEFSDFSISFKSQPGALPTFLLVDRGDCFFALKVWNAQKAGASAVLVADNVDEPLITMDTPEEDVSSAKYIENITIPSAL 155
BLAST of CX292293 vs. ExPASy Swiss-Prot
Match: VSR3_ARATH (Vacuolar-sorting receptor 3 OS=Arabidopsis thaliana GN=VSR3 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.433e-25 Identity = 51/82 (62.20%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 2 ACKGFDEVDLSFKSRPGGLPTFLLVDRGDCYFTLKAWNAQKGGAAAILVADDKTEPLITMDTPEEENADAEYLKTSPFPQPL 247 +CK F + +SFKS+PG LPTFLLVDRGDC+F LK WNAQK GA+A+LVAD+ EPLITMDTPEE+ + A+Y++ P L Sbjct: 74 SCKEFSDFSISFKSQPGALPTFLLVDRGDCFFALKVWNAQKAGASAVLVADNVDEPLITMDTPEEDVSSAKYIENITIPSAL 155
BLAST of CX292293 vs. ExPASy Swiss-Prot
Match: VSR1_PEA (Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP80 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.743e-23 Identity = 50/80 (62.50%), Postives = 60/80 (75.00%), Query Frame = 2 Query: 8 KGFDEVDLSFKSRPGGLPTFLLVDRGDCYFTLKAWNAQKGGAAAILVADDKTEPLITMDTPEEENADAEYLKTSPFPQPL 247 KG + D SFKSRPG LPT LL+DRG C+F LK WNAQK GA+A+LVADD EPLITMDTPEE+ + A+Y++ P L Sbjct: 71 KGCKDFDSSFKSRPGALPTILLLDRGSCFFALKVWNAQKAGASAVLVADDIEEPLITMDTPEEDVSSAKYIENITIPSAL 150
BLAST of CX292293 vs. ExPASy Swiss-Prot
Match: VSR6_ARATH (Vacuolar-sorting receptor 6 OS=Arabidopsis thaliana GN=VSR6 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 3.893e-15 Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 2 Query: 11 GFDEVDLSFKSRPGGLPTFLLVDRGDCYFTLKAWNAQKGGAAAILVADDKTEPLITMDTPEEENADAEYLKTSPFPQPL 247 G D D +FK + PT L++DRG+CYF LK WN Q+ G AA+LVAD+ EPLITMD+PEE ++++ P L Sbjct: 75 GCDSFDKTFKPK-FPRPTILIIDRGECYFALKVWNGQQSGVAAVLVADNVDEPLITMDSPEESKEADDFIEKLNIPSAL 152
BLAST of CX292293 vs. ExPASy Swiss-Prot
Match: VSR7_ARATH (Vacuolar-sorting receptor 7 OS=Arabidopsis thaliana GN=VSR7 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 5.621e-14 Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 2 Query: 59 PTFLLVDRGDCYFTLKAWNAQKGGAAAILVADDKTEPLITMDTPEEENADAEYLKTSPFPQPL 247 PT LL+DRG CYF LKAW+AQ+ GAAA+LVAD+ EPL+TMD+PEE +++ P L Sbjct: 91 PTILLLDRGGCYFALKAWHAQQAGAAAVLVADNVDEPLLTMDSPEESKDADGFIEKLTIPSVL 153
BLAST of CX292293 vs. ExPASy Swiss-Prot
Match: VSR5_ARATH (Vacuolar-sorting receptor 5 OS=Arabidopsis thaliana GN=VSR5 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.808e-12 Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 2 Query: 59 PTFLLVDRGDCYFTLKAWNAQKGGAAAILVADDKTEPLITMDTPEEENADAEYLKTSPFPQPL-*QIFGCSIK 274 P LL+DRG C F LK WN Q+ GAAA+L+AD+ EPLITMDTP++E D +++ P L + FG S+K Sbjct: 91 PKILLIDRGVCNFALKIWNGQQSGAAAVLLADNIVEPLITMDTPQDE--DPDFIDKVKIPSALILRSFGDSLK 161 The following BLAST results are available for this feature:
BLAST of CX292293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX292293 ID=CX292293; Name=CX292293; organism=Citrus clementina; type=EST; length=293bpback to top |