CX292376

Overview
NameCX292376
Unique NameCX292376
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length533
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX292376 vs. ExPASy Swiss-Prot
Match: ACOX3_ARATH (Acyl-coenzyme A oxidase 3, peroxisomal OS=Arabidopsis thaliana GN=ACX3 PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 9.135e-26
Identity = 53/75 (70.67%), Postives = 62/75 (82.67%), Query Frame = 1 
Query:   10 LRSLYALTCLEEDAAFLRYGYLSTDNASAVRNEVQKLCSEIRPHALALVSSFGIPDAFLGPIAFDWIDANTWSSV 234
            +RS+YAL  LEED + LRYGYLS DN   VR EV KLC E+RPHALALV+SFGIPD+FL PIAF+W++AN WSSV
Sbjct:  601 VRSMYALISLEEDPSLLRYGYLSQDNVGDVRREVSKLCGELRPHALALVTSFGIPDSFLSPIAFNWVEANAWSSV 675
[Close]
BLAST of CX292376 vs. ExPASy Swiss-Prot
Match: ACO32_ARATH (Putative acyl-coenzyme A oxidase 3.2, peroxisomal OS=Arabidopsis thaliana GN=ACX3.2 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.471e-25
Identity = 52/75 (69.33%), Postives = 62/75 (82.67%), Query Frame = 1 
Query:   10 LRSLYALTCLEEDAAFLRYGYLSTDNASAVRNEVQKLCSEIRPHALALVSSFGIPDAFLGPIAFDWIDANTWSSV 234
            +RS+YAL  LEED + LRYG+LS DN   VR EV KLC E+RPHALALV+SFGIPDAFL PIAF+W++AN WSS+
Sbjct:  601 VRSMYALISLEEDPSLLRYGHLSRDNVGDVRKEVSKLCGELRPHALALVASFGIPDAFLSPIAFNWVEANAWSSL 675
The following BLAST results are available for this feature:
BLAST of CX292376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ACOX3_ARATH9.135e-2670.67Acyl-coenzyme A oxidase 3, peroxisomal OS=Arabidop... [more]
ACO32_ARATH3.471e-2569.33Putative acyl-coenzyme A oxidase 3.2, peroxisomal ... [more]
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Properties
Property NameValue
Genbank descriptionC04015A02SK FlavFr1 Citrus clementina cDNA clone C04015A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292376 ID=CX292376; Name=CX292376; organism=Citrus clementina; type=EST; length=533bp
TCTGCAGGGTTGAGATCTTTGTATGCTCTGACCTGTTTGGAAGAAGATGC
TGCATTCCTACGATATGGTTATTTATCAACAGACAATGCTTCTGCTGTGA
GGAACGAAGTGCAAAAGCTCTGCAGCGAAATTCGACCACATGCACTTGCC
TTGGTCAGTTCCTTCGGCATTCCCGATGCTTTCTTGGGCCCTATAGCATT
CGACTGGATTGATGCAAATACTTGGTCCTCAGTTCAGTAGTGTAGGTGCC
ATACTGTATCTCGTACTTCTATTAAGCAAAAGATTTAGTGATCAAAGCTC
TCTGCTTCCGTCAATAAGAGCAGCATAGATAACTCTTACCGAACACTTTC
TGTCAAACCGTTCATTATTATTATTATTATTACTATTACTACTATTACTT
TATTGGTTCAGTCCACAGTTATCATGTTGTTTGGGTTATCTAAACCCAGC
CAATTGTTACCTTGGTAGCAGGAGAAATGTTAATGCAACAAATTGTTCAT
CAAAATATGATAATAAAATGATACAGCAATTGA
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