CX292406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292406 vs. ExPASy Swiss-Prot
Match: RS6_ASPOF (40S ribosomal protein S6 OS=Asparagus officinalis GN=rps6 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 3.618e-42 Identity = 80/82 (97.56%), Postives = 82/82 (100.00%), Query Frame = 2 Query: 74 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTP 319 MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTP Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTP 82
BLAST of CX292406 vs. ExPASy Swiss-Prot
Match: RS62_ARATH (40S ribosomal protein S6-2 OS=Arabidopsis thaliana GN=RPS6B PE=1 SV=3) HSP 1 Score: 169.859 bits (429), Expect = 3.618e-42 Identity = 79/82 (96.34%), Postives = 82/82 (100.00%), Query Frame = 2 Query: 74 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTP 319 MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEV+GDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTP Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTP 82
BLAST of CX292406 vs. ExPASy Swiss-Prot
Match: RS61_ARATH (40S ribosomal protein S6-1 OS=Arabidopsis thaliana GN=RPS6A PE=1 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 2.345e-41 Identity = 78/82 (95.12%), Postives = 81/82 (98.78%), Query Frame = 2 Query: 74 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTP 319 MKFN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GDALGEEFKGYVFKI GGCDKQGFPMKQGVLTPGRVRLLLHRGTP Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQGFPMKQGVLTPGRVRLLLHRGTP 82
BLAST of CX292406 vs. ExPASy Swiss-Prot
Match: RS6_ASHGO (40S ribosomal protein S6 OS=Ashbya gossypii GN=RPS6 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.608e-27 Identity = 54/81 (66.67%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 74 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGT 316 MK NI+ P G QK +E+DD+ ++R F+DKRI QEVNG+A+G+EFKGYVFKI GG DKQGFPMKQGVL P RV+LL+ +GT Sbjct: 1 MKLNISYPVNGTQKTIEVDDEHRVRVFYDKRIGQEVNGEAVGDEFKGYVFKIAGGNDKQGFPMKQGVLLPTRVKLLMAKGT 81
BLAST of CX292406 vs. ExPASy Swiss-Prot
Match: RS6_RAT (40S ribosomal protein S6 OS=Rattus norvegicus GN=Rps6 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.131e-26 Identity = 55/80 (68.75%), Postives = 67/80 (83.75%), Query Frame = 2 Query: 74 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRG 313 MK NI+ P TGCQK +E+DD++KLR F++KR++ EV DALGEE+KGYV +I GG DKQGFPMKQGVLT GRVRLLL +G Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKG 80
BLAST of CX292406 vs. ExPASy Swiss-Prot
Match: RS6_MOUSE (40S ribosomal protein S6 OS=Mus musculus GN=Rps6 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.131e-26 Identity = 55/80 (68.75%), Postives = 67/80 (83.75%), Query Frame = 2 Query: 74 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRG 313 MK NI+ P TGCQK +E+DD++KLR F++KR++ EV DALGEE+KGYV +I GG DKQGFPMKQGVLT GRVRLLL +G Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKG 80
BLAST of CX292406 vs. ExPASy Swiss-Prot
Match: RS6_MACFA (40S ribosomal protein S6 OS=Macaca fascicularis GN=RPS6 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.131e-26 Identity = 55/80 (68.75%), Postives = 67/80 (83.75%), Query Frame = 2 Query: 74 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRG 313 MK NI+ P TGCQK +E+DD++KLR F++KR++ EV DALGEE+KGYV +I GG DKQGFPMKQGVLT GRVRLLL +G Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKG 80
BLAST of CX292406 vs. ExPASy Swiss-Prot
Match: RS6_HUMAN (40S ribosomal protein S6 OS=Homo sapiens GN=RPS6 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.131e-26 Identity = 55/80 (68.75%), Postives = 67/80 (83.75%), Query Frame = 2 Query: 74 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRG 313 MK NI+ P TGCQK +E+DD++KLR F++KR++ EV DALGEE+KGYV +I GG DKQGFPMKQGVLT GRVRLLL +G Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKG 80
BLAST of CX292406 vs. ExPASy Swiss-Prot
Match: RS6_BOVIN (40S ribosomal protein S6 OS=Bos taurus GN=RPS6 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.131e-26 Identity = 55/80 (68.75%), Postives = 67/80 (83.75%), Query Frame = 2 Query: 74 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRG 313 MK NI+ P TGCQK +E+DD++KLR F++KR++ EV DALGEE+KGYV +I GG DKQGFPMKQGVLT GRVRLLL +G Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKG 80
BLAST of CX292406 vs. ExPASy Swiss-Prot
Match: RS6_KLUMA (40S ribosomal protein S6 OS=Kluyveromyces marxianus GN=RPS6 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.747e-26 Identity = 54/81 (66.67%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 74 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGT 316 MK NI+ P G QK +EIDD+ ++R F+DKRI QEV+G+A+G+EFKGYVFKI GG DKQGFPMKQGVL P RV+LL+ +GT Sbjct: 1 MKLNISYPINGTQKCVEIDDEHRVRVFYDKRIGQEVDGEAVGDEFKGYVFKIAGGNDKQGFPMKQGVLLPTRVKLLMAKGT 81 The following BLAST results are available for this feature:
BLAST of CX292406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292406 ID=CX292406; Name=CX292406; organism=Citrus clementina; type=EST; length=321bpback to top |