CX292410

Overview
NameCX292410
Unique NameCX292410
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length522
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX292410 vs. ExPASy Swiss-Prot
Match: PCYOX_ARATH (Probable prenylcysteine oxidase OS=Arabidopsis thaliana GN=At5g63910 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.978e-30
Identity = 62/83 (74.70%), Postives = 73/83 (87.95%), Query Frame = -3 
Query:  272 PMTDTLLDDIFSVRKETIRINWGAYPHYKAPEVFAPFILDGRHLYYVNAFENAASTMETSAVAAENVARLILSRFFSKPSVTS 520
            P +D+LLD++FS R ET+RI+WGAYP Y APEVFAPFILD  HLYYVNAFENAASTMETSAVA EN+ARLI+SRF +K S++S
Sbjct:  404 PASDSLLDELFSRRTETVRIDWGAYPKYHAPEVFAPFILDDHHLYYVNAFENAASTMETSAVAGENIARLIISRFMTKESLSS 486
The following BLAST results are available for this feature:
BLAST of CX292410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PCYOX_ARATH1.978e-3074.70Probable prenylcysteine oxidase OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionC04015D08SK FlavFr1 Citrus clementina cDNA clone C04015D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292410 ID=CX292410; Name=CX292410; organism=Citrus clementina; type=EST; length=522bp
CCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTG
ACAGAAAGTTTGTTGCATTGCTCCACAAATTTATTTTGACAGGGTAAAAA
GGTTTCATGTCGCGTACGGACATTCTTAAATTGGTTCTATGTTCTACACA
ATTTTACACCATACGTGGATTCGTTGATGAAAACGAATCACAAATCTAAA
AGAGTTATTGATCATAATCATAAATCTAAGTGCAGTTCCTCCCTAGCATC
AAATGAGGTCTTCAAATTTAAAGAAGTCACAGACGGCTTGCTGAAAAATC
TTGACAGGATAAGCCGTGCTACATTCTCAGCAGCAACTGCACTTGTCTCC
ATGGTACTAGCTGCGTTCTCAAAAGCATTCACATAGTACAAATGCCGGCC
ATCTAAAATGAATGGTGCGAATACCTCCGGAGCTTTGTAATGAGGGTAAG
CCCCCCAGTTTATACGAATTGTCTCCTTCCTCACACTGAAGATGTCATCT
AATAAAGTATCTGTCATTGGTT
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