CX292412
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292412 vs. ExPASy Swiss-Prot
Match: U4974_RICCO (UPF0497 membrane protein 4 OS=Ricinus communis GN=RCOM_0679870 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.193e-32 Identity = 68/103 (66.02%), Postives = 83/103 (80.58%), Query Frame = 3 Query: 54 VRENYFGIDVGLRVLLFAATLVSVIVMATAKQTELVTPPGIP-IRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVM 359 +R +YF +DVGLRV LFA TL +++VM+TAKQTEL PG+P +RV V+AKF SPAFIYFVAALSVACLYSIIT LASL V++KP A + L Y+A WDV+M Sbjct: 25 LRRDYFAVDVGLRVFLFATTLTAIVVMSTAKQTELAPVPGVPGLRVPVEAKFNHSPAFIYFVAALSVACLYSIITTLASLGVIAKPIYATKFLFYYALWDVLM 127
BLAST of CX292412 vs. ExPASy Swiss-Prot
Match: U497F_VITVI (UPF0497 membrane protein 15 OS=Vitis vinifera GN=GSVIVT00019814001 PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 7.748e-24 Identity = 54/98 (55.10%), Postives = 72/98 (73.47%), Query Frame = 3 Query: 66 YFGIDVGLRVLLFAATLVSVIVMATAKQTELVTPPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVM 359 Y +DV LR+LL + + SV+VM T+ QT+L+ G+P+ VS KAKF +SPAFIYFVAALSV LYSIIT LAS +SKP+ + + +L+ A WDV+M Sbjct: 39 YSALDVVLRILLLGSAVASVVVMVTSVQTKLIAVAGVPVLVSNKAKFQNSPAFIYFVAALSVVGLYSIITTLASFIFISKPSCSTKTILHLAIWDVLM 136
BLAST of CX292412 vs. ExPASy Swiss-Prot
Match: U497C_SOYBN (UPF0497 membrane protein 12 OS=Glycine max PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.471e-22 Identity = 57/99 (57.58%), Postives = 70/99 (70.71%), Query Frame = 3 Query: 63 NYFGIDVGLRVLLFAATLVSVIVMATAKQTELVTPPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVM 359 +YF DV LR LLFAA+LV+V+V+ TA QTE++ +P V AKF SPAF+YFVAALSV LYSIIT LASL +KPA +LLLYF WD ++ Sbjct: 25 DYFKFDVILRFLLFAASLVAVVVIVTANQTEVIR---VPQPVPWPAKFRYSPAFVYFVAALSVTGLYSIITTLASLLASNKPALKTKLLLYFILWDALI 120
BLAST of CX292412 vs. ExPASy Swiss-Prot
Match: U4972_MUSAC (UPF0497 membrane protein 2 OS=Musa acuminata GN=MA4_106O17.52 PE=3 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 8.018e-21 Identity = 49/102 (48.04%), Postives = 69/102 (67.65%), Query Frame = 3 Query: 63 NYFGIDVGLRVLLFAATLVSVIVMATAKQTELVT---PPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVM 359 N FG+D GLR+LL A+ + +++V+ T+KQTE + PP P +S AKF SPAFIY + ALSV C YSIITM+AS + ++ P+S+ R+L + D VM Sbjct: 19 NLFGVDFGLRLLLLASAVSALVVLVTSKQTESIPTSLPPPFPAFISRDAKFQHSPAFIYLLVALSVTCFYSIITMVASFAAITSPSSSPRMLFHLVLSDAVM 120
BLAST of CX292412 vs. ExPASy Swiss-Prot
Match: U497D_SOYBN (UPF0497 membrane protein 13 OS=Glycine max PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.865e-20 Identity = 53/99 (53.54%), Postives = 68/99 (68.69%), Query Frame = 3 Query: 63 NYFGIDVGLRVLLFAATLVSVIVMATAKQTELVTPPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVM 359 +YF DV LR +LFAA+LV+V+V+ T QTE++ +P V AKF +PAF+YFVAALSV LYSIIT LASL +KPA +LL YF WD ++ Sbjct: 25 DYFKFDVILRFVLFAASLVAVVVIVTGNQTEVIL---VPQPVPWPAKFRYTPAFVYFVAALSVTGLYSIITTLASLFASNKPALKTKLLPYFILWDALI 120
BLAST of CX292412 vs. ExPASy Swiss-Prot
Match: U497P_ARATH (UPF0497 membrane protein At4g15610 OS=Arabidopsis thaliana GN=At4g15610 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.183e-18 Identity = 49/93 (52.69%), Postives = 64/93 (68.82%), Query Frame = 3 Query: 81 VGLRVLLFAATLVSVIVMATAKQTELVTPPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVM 359 V LR +LFAATL S++VM T+KQT+ + PG PIR+ A+FT+SPA IYFV ALSVAC YSI++ ++S K + + LLL A D VM Sbjct: 31 VVLRFVLFAATLTSIVVMVTSKQTKNIFLPGTPIRIPA-AEFTNSPALIYFVVALSVACFYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVM 122
BLAST of CX292412 vs. ExPASy Swiss-Prot
Match: U497F_ARATH (UPF0497 membrane protein At3g06390 OS=Arabidopsis thaliana GN=At3g06390 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.183e-18 Identity = 47/95 (49.47%), Postives = 64/95 (67.37%), Query Frame = 3 Query: 75 IDVGLRVLLFAATLVSVIVMATAKQTELVTPPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVM 359 ID+ RVLLF+ATL ++IVM T+ QTE+ PG+ V A+F DSPAFIYFV AL VA Y++I+ L S+S++ KP + +Y A D+VM Sbjct: 37 IDIITRVLLFSATLTALIVMVTSDQTEMTQLPGVSSPAPVSAEFNDSPAFIYFVVALVVASFYALISTLVSISLLLKPEFTAQFSIYLASLDMVM 131
BLAST of CX292412 vs. ExPASy Swiss-Prot
Match: U497_IPONI (UPF0497 membrane protein In26 (Fragment) OS=Ipomoea nil GN=IN26 PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 3.486e-16 Identity = 50/105 (47.62%), Postives = 70/105 (66.67%), Query Frame = 3 Query: 57 RENYFGIDVGLRVLLFAATLVSVIVMATAKQTELVT---PPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASL-SVVSKPASAKRLLLYFAFWDVVM 359 +E Y + LR+LL A+ +V+V+VM T+K+TEL++ P P + + AKFT SPAFIYFVA LSVA LY+II+ LAS +++ KP L+ +F DVVM Sbjct: 19 KEYYKVTEAILRLLLLASLVVAVVVMVTSKETELISVKLDPFPPFMLPLTAKFTQSPAFIYFVAGLSVAGLYTIISTLASFYNLLIKPGFCPALVSHFIILDVVM 123
BLAST of CX292412 vs. ExPASy Swiss-Prot
Match: U4972_SORBI (UPF0497 membrane protein Sb02g009660 OS=Sorghum bicolor GN=Sb02g009660 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.014e-15 Identity = 45/93 (48.39%), Postives = 58/93 (62.37%), Query Frame = 3 Query: 57 RENYFGIDVGLRVLLFAATLVSVIVMATAKQTELVTPPGIP-IRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLL 332 R ++ G D+ LR LLFA TL +IV+ATAKQT + P IP + VS AKF SPA IY + A V C YS++T L SL ++S + K L L Sbjct: 30 RSSFSGADLALRALLFAVTLAGLIVLATAKQTVSIPVPEIPGLLVSRPAKFNHSPALIYLLVAQCVTCFYSLLTALTSLKLISGSSPTKTLFL 122
BLAST of CX292412 vs. ExPASy Swiss-Prot
Match: U497_PANGI (UPF0497 membrane protein OS=Panax ginseng PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.465e-14 Identity = 42/76 (55.26%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 132 MATAKQTELVTPPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVM 359 M T KQTEL+ P P ++ +KFTDSPAFIYFVAA SVA LYSIIT L S + KP AK+L+ +F DV++ Sbjct: 1 MVTGKQTELIPIPFPPYQIPYSSKFTDSPAFIYFVAAFSVAGLYSIITSLLSGLALLKPGYAKQLVSHFVVVDVLL 76 The following BLAST results are available for this feature:
BLAST of CX292412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292412 ID=CX292412; Name=CX292412; organism=Citrus clementina; type=EST; length=359bpback to top |