CX292414

Overview
NameCX292414
Unique NameCX292414
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length608
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292414 vs. ExPASy Swiss-Prot
Match: DLDH1_ARATH (Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=LPD1 PE=1 SV=2)

HSP 1 Score: 357.066 bits (915), Expect = 4.081e-98
Identity = 178/202 (88.12%), Postives = 191/202 (94.55%), Query Frame = 2
Query:    2 EVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNVPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKI 607
            EVTVVEFA DIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVV VD S DGVKLT+EPA GGE++ILEADVVLVSAGRTPFT+GL L+KIGVETDK GRI VN+RF +NVPGVYAIGDVIPGPMLAHKAEEDGVACVEF+AGKHGHVDYDKVPGVVYTHPEVASVGKTEEQ+K+ GV YRVGKFPF+ANSRAKAID+AEG+VKI
Sbjct:  239 EVTVVEFAGDIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVSVDSSSDGVKLTVEPAEGGEQSILEADVVLVSAGRTPFTSGLDLEKIGVETDKAGRILVNDRFLSNVPGVYAIGDVIPGPMLAHKAEEDGVACVEFIAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQLKKEGVSYRVGKFPFMANSRAKAIDNAEGLVKI 440          
BLAST of CX292414 vs. ExPASy Swiss-Prot
Match: DLDH_PEA (Dihydrolipoyl dehydrogenase, mitochondrial OS=Pisum sativum GN=LPD PE=1 SV=2)

HSP 1 Score: 355.525 bits (911), Expect = 1.187e-97
Identity = 178/202 (88.12%), Postives = 193/202 (95.54%), Query Frame = 2
Query:    2 EVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNVPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKI 607
            EVTVVEFA++IVP+MD EIRKQFQRSLEKQ MKF LKTKVVGVD SGDGVKLT+EP+AGGE+TI+EADVVLVSAGRTPFT+GL LDKIGVETDK+GRI VNERF+TNV GVYAIGDVIPGPMLAHKAEEDGVACVE+LAGK GHVDYDKVPGVVYT+PEVASVGKTEEQVKE GVEYRVGKFPF+ANSRAKAID+AEG+VKI
Sbjct:  233 EVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAGKVGHVDYDKVPGVVYTNPEVASVGKTEEQVKETGVEYRVGKFPFMANSRAKAIDNAEGLVKI 434          
BLAST of CX292414 vs. ExPASy Swiss-Prot
Match: DLDH2_ARATH (Dihydrolipoyl dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=LPD2 PE=1 SV=1)

HSP 1 Score: 353.599 bits (906), Expect = 4.512e-97
Identity = 178/202 (88.12%), Postives = 190/202 (94.06%), Query Frame = 2
Query:    2 EVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNVPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKI 607
            EVTVVEFAADIVP+MDGEIRKQFQRSLEKQKMKFMLKTKVVGVD SGDGVKL +EPA GGE+T LEADVVLVSAGRTPFT+GL L+KIGVETDK GRI VNERF+TNV GVYAIGDVIPGPMLAHKAEEDGVACVEF+AGKHGHVDYDKVPGVVYT+PEVASVGKTEEQ+K+ GV Y VGKFPF+ANSRAKAID AEG+VKI
Sbjct:  239 EVTVVEFAADIVPAMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDSSGDGVKLIVEPAEGGEQTTLEADVVLVSAGRTPFTSGLDLEKIGVETDKGGRILVNERFSTNVSGVYAIGDVIPGPMLAHKAEEDGVACVEFIAGKHGHVDYDKVPGVVYTYPEVASVGKTEEQLKKEGVSYNVGKFPFMANSRAKAIDTAEGMVKI 440          
BLAST of CX292414 vs. ExPASy Swiss-Prot
Match: DLDH_PONAB (Dihydrolipoyl dehydrogenase, mitochondrial OS=Pongo abelii GN=DLD PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.516e-60
Identity = 115/204 (56.37%), Postives = 148/204 (72.55%), Query Frame = 2
Query:    2 EVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDG-VKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNVPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKI 607
            +VT VEF   +    +D EI K FQR L+KQ  KF L TKV G     DG + +++E A+GG+  ++  DV+LV  GR PFT  LGL+++G+E D  GRIPVN RF T +P +YAIGDV+ GPMLAHKAE++G+ CVE +AG   H+DY+ VP V+YTHPEVA VGK+EEQ+KE G+EY+VGKFPF ANSRAK   D +G+VKI
Sbjct:  238 DVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKI 441          
BLAST of CX292414 vs. ExPASy Swiss-Prot
Match: DLDH_MACFA (Dihydrolipoyl dehydrogenase, mitochondrial OS=Macaca fascicularis GN=DLD PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.516e-60
Identity = 115/204 (56.37%), Postives = 148/204 (72.55%), Query Frame = 2
Query:    2 EVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDG-VKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNVPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKI 607
            +VT VEF   +    +D EI K FQR L+KQ  KF L TKV G     DG + +++E A+GG+  ++  DV+LV  GR PFT  LGL+++G+E D  GRIPVN RF T +P +YAIGDV+ GPMLAHKAE++G+ CVE +AG   H+DY+ VP V+YTHPEVA VGK+EEQ+KE G+EY+VGKFPF ANSRAK   D +G+VKI
Sbjct:  238 DVTAVEFLGHVGGIGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKI 441          
BLAST of CX292414 vs. ExPASy Swiss-Prot
Match: DLDH_HUMAN (Dihydrolipoyl dehydrogenase, mitochondrial OS=Homo sapiens GN=DLD PE=1 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 1.516e-60
Identity = 115/204 (56.37%), Postives = 148/204 (72.55%), Query Frame = 2
Query:    2 EVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDG-VKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNVPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKI 607
            +VT VEF   +    +D EI K FQR L+KQ  KF L TKV G     DG + +++E A+GG+  ++  DV+LV  GR PFT  LGL+++G+E D  GRIPVN RF T +P +YAIGDV+ GPMLAHKAE++G+ CVE +AG   H+DY+ VP V+YTHPEVA VGK+EEQ+KE G+EY+VGKFPF ANSRAK   D +G+VKI
Sbjct:  238 DVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKI 441          
BLAST of CX292414 vs. ExPASy Swiss-Prot
Match: DLDH_CRIGR (Dihydrolipoyl dehydrogenase, mitochondrial OS=Cricetulus griseus GN=DLD PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 2.586e-60
Identity = 115/204 (56.37%), Postives = 148/204 (72.55%), Query Frame = 2
Query:    2 EVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDG-VKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNVPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKI 607
            +VT VEF   +    +D EI K FQR L+KQ  KF L TKV G     DG + +++E A+GG+  ++  DV+LV  GR PFT  LGL+++G+E D  GRIPVN RF T +P +YAIGDV+ GPMLAHKAE++G+ CVE +AG   H+DY+ VP V+YTHPEVA VGK+EEQ+KE G+EY+VGKFPF ANSRAK   D +G+VKI
Sbjct:  238 DVTAVEFLGHVGGIGIDMEISKNFQRILQKQGFKFKLNTKVTGATKRSDGKIDVSVEAASGGKAEVITCDVLLVCIGRRPFTQNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKI 441          
BLAST of CX292414 vs. ExPASy Swiss-Prot
Match: DLDH_PIG (Dihydrolipoyl dehydrogenase, mitochondrial OS=Sus scrofa GN=DLD PE=1 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 4.411e-60
Identity = 113/204 (55.39%), Postives = 148/204 (72.55%), Query Frame = 2
Query:    2 EVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDG-VKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNVPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKI 607
            +VT VE    +    +D E+ K FQR L+KQ  KF L TKV+G     DG + +++E A+GG+  ++  DV+LV  GR PFT  LGL+++G+E D  GRIPVN RF T +P +YAIGDV+ GPMLAHKAE++G+ CVE +AG   H+DY+ VP V+YTHPEVA VGK+EEQ+KE G+EY+VGKFPF ANSRAK   D +G+VKI
Sbjct:  238 DVTAVELLGHVGGIGIDMEVSKNFQRILQKQGFKFKLNTKVIGATKKSDGNIDVSIEAASGGKAEVITCDVLLVCIGRRPFTQNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKI 441          
BLAST of CX292414 vs. ExPASy Swiss-Prot
Match: DLDH_RAT (Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Dld PE=1 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.283e-59
Identity = 114/204 (55.88%), Postives = 148/204 (72.55%), Query Frame = 2
Query:    2 EVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDG-VKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNVPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKI 607
            +VT VEF   +    +D EI K FQR L+KQ  KF L TKV G     DG + +++E A+GG+  ++  DV+LV  GR PFT  LGL+++G+E D  GRIPVN RF T +P ++AIGDV+ GPMLAHKAE++G+ CVE +AG   H+DY+ VP V+YTHPEVA VGK+EEQ+KE GVE++VGKFPF ANSRAK   D +G+VKI
Sbjct:  238 DVTAVEFLGHVGGIGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSVEAASGGKAEVITCDVLLVCIGRRPFTQNLGLEELGIELDPKGRIPVNTRFQTKIPNIFAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGVEFKVGKFPFAANSRAKTNADTDGMVKI 441          
BLAST of CX292414 vs. ExPASy Swiss-Prot
Match: DLDH_MOUSE (Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus musculus GN=Dld PE=1 SV=2)

HSP 1 Score: 229.18 bits (583), Expect = 1.283e-59
Identity = 112/204 (54.90%), Postives = 148/204 (72.55%), Query Frame = 2
Query:    2 EVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDG-VKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNVPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKI 607
            +VT VEF   +    +D EI K FQR L++Q  KF L TKV G     DG + +++E A+GG+  ++  DV+LV  GR PFT  LGL+++G+E D  GRIPVN RF T +P +YAIGDV+ GPMLAHKAE++G+ CVE +AG   H+DY+ VP V+YTHPEVA VGK+EEQ+KE G+E+++GKFPF ANSRAK   D +G+VKI
Sbjct:  238 DVTAVEFLGHVGGIGIDMEISKNFQRILQRQGFKFKLNTKVTGATKKSDGKIDVSVEAASGGKAEVITCDVLLVCIGRRPFTQNLGLEELGIELDPKGRIPVNNRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEFKIGKFPFAANSRAKTNADTDGMVKI 441          
The following BLAST results are available for this feature:
BLAST of CX292414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
DLDH1_ARATH4.081e-9888.12Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Ar... [more]
DLDH_PEA1.187e-9788.12Dihydrolipoyl dehydrogenase, mitochondrial OS=Pisu... [more]
DLDH2_ARATH4.512e-9788.12Dihydrolipoyl dehydrogenase 2, mitochondrial OS=Ar... [more]
DLDH_PONAB1.516e-6056.37Dihydrolipoyl dehydrogenase, mitochondrial OS=Pong... [more]
DLDH_MACFA1.516e-6056.37Dihydrolipoyl dehydrogenase, mitochondrial OS=Maca... [more]
DLDH_HUMAN1.516e-6056.37Dihydrolipoyl dehydrogenase, mitochondrial OS=Homo... [more]
DLDH_CRIGR2.586e-6056.37Dihydrolipoyl dehydrogenase, mitochondrial OS=Cric... [more]
DLDH_PIG4.411e-6055.39Dihydrolipoyl dehydrogenase, mitochondrial OS=Sus ... [more]
DLDH_RAT1.283e-5955.88Dihydrolipoyl dehydrogenase, mitochondrial OS=Ratt... [more]
DLDH_MOUSE1.283e-5954.90Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionC04015D12SK FlavFr1 Citrus clementina cDNA clone C04015D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292414 ID=CX292414; Name=CX292414; organism=Citrus clementina; type=EST; length=608bp
AGAGGTCACTGTTGTTGAATTTGCAGCTGATATCGTCCCAAGCATGGATG
GGGAAATTCGCAAGCAATTTCAGCGTTCACTTGAGAAGCAGAAGATGAAA
TTCATGCTCAAAACTAAGGTGGTGGGAGTTGATTTATCTGGTGATGGTGT
CAAGTTGACCCTTGAACCAGCAGCTGGTGGTGAGAAGACCATACTTGAAG
CTGATGTTGTTCTTGTGTCTGCTGGCCGGACTCCATTCACCGCTGGGCTC
GGGCTGGATAAGATAGGAGTGGAAACCGATAAGATGGGACGGATACCAGT
TAATGAGAGATTTGCTACAAACGTACCTGGTGTTTATGCGATTGGAGACG
TAATTCCAGGACCAATGTTAGCTCACAAGGCAGAAGAGGATGGGGTTGCT
TGTGTTGAATTCTTAGCTGGTAAACATGGCCATGTGGACTATGATAAGGT
CCCTGGAGTTGTCTACACACACCCTGAGGTTGCTTCAGTTGGGAAGACTG
AGGAGCAGGTAAAGGAACTTGGTGTTGAGTACCGTGTGGGGAAATTCCCT
TTCTTGGCAAATAGCCGAGCAAAAGCTATTGATGATGCTGAAGGAATAGT
CAAGATTT
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