CX292449
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292449 vs. ExPASy Swiss-Prot
Match: CML49_ARATH (Probable calcium-binding protein CML49 OS=Arabidopsis thaliana GN=CML49 PE=2 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 3.858e-68 Identity = 121/152 (79.61%), Postives = 140/152 (92.11%), Query Frame = 2 Query: 5 ADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTRFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFML 460 ADRDNSG IDDKELQGALSSYNQSFS+RTV LLMY FTN+N RKIGPKEF +F SLQNWR++FE+ D+DRSG+ID+NELR+ALMSLGF+VSPV+LDLLV++FDK+GG+++AIEYDNFIECCLTVKGLTEKFKE+DT SGSA F YENFML Sbjct: 176 ADRDNSGFIDDKELQGALSSYNQSFSIRTVHLLMYLFTNSNVRKIGPKEFTSLFFSLQNWRSIFERFDKDRSGRIDTNELRDALMSLGFSVSPVILDLLVSKFDKSGGRNRAIEYDNFIECCLTVKGLTEKFKEKDTALSGSAIFNYENFML 327
BLAST of CX292449 vs. ExPASy Swiss-Prot
Match: CML50_ARATH (Probable calcium-binding protein CML50 OS=Arabidopsis thaliana GN=CML50 PE=2 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 2.117e-66 Identity = 119/152 (78.29%), Postives = 139/152 (91.45%), Query Frame = 2 Query: 5 ADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTRFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFML 460 AD+D SG IDDKELQGALSSY Q FS+RTV LLMY FTN+NA KIGPKEF +F+SLQNWR++FE+ D+DRSG+ID NELR+AL+SLGF+VSPVVLDLLV++FDK+GGK++AIEYDNFIECCLTVKGLTEKFKE+DT YSGSATF YE+FML Sbjct: 195 ADQDGSGFIDDKELQGALSSYQQRFSMRTVHLLMYLFTNSNAMKIGPKEFTALFYSLQNWRSIFERSDKDRSGRIDVNELRDALLSLGFSVSPVVLDLLVSKFDKSGGKNRAIEYDNFIECCLTVKGLTEKFKEKDTAYSGSATFNYESFML 346
BLAST of CX292449 vs. ExPASy Swiss-Prot
Match: CML48_ARATH (Probable calcium-binding protein CML48 OS=Arabidopsis thaliana GN=CML48 PE=2 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 2.888e-31 Identity = 69/155 (44.52%), Postives = 106/155 (68.39%), Query Frame = 2 Query: 5 ADRDNSGLIDDKELQGALS-SYNQSFSLRTVRLLM--YTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTRFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFML 460 ADR+ SG +++ EL+ ALS S S RT+RLL+ Y + ++GPKE++++++ L WRA+F + DRDRSGK++S +LR+A +LG + V L+V++FD GK+ + +D+F+EC + VKGLTEKF+E D Y+G AT +Y+ FML Sbjct: 64 ADRNRSGFLEESELRQALSLSGYDGISNRTIRLLLFIYKIPVDSLLRLGPKEYVELWNCLAQWRAIFNRYDRDRSGKMNSTQLRDAFYNLGCVLPTSVHQLIVSQFDDGTGKTVDLCFDSFLECGMIVKGLTEKFRENDPGYTGYATLSYDVFML 218
BLAST of CX292449 vs. ExPASy Swiss-Prot
Match: PEF1_DANRE (Peflin OS=Danio rerio GN=pef1 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 5.832e-24 Identity = 55/151 (36.42%), Postives = 94/151 (62.25%), Query Frame = 2 Query: 8 DRDNSGLIDDKELQGALSSYNQS-FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTRFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFM 457 D D SG I+ KEL+ AL ++N S F+ T +++ F T + ++ F ++ LQ WRA F++ DRDRSG I++NE+ +AL +G+ +SP + LV R+ GG + ++ D FI+ C ++ +T+ F+E+DT +G+ +YE+F+ Sbjct: 113 DSDQSGYINAKELKQALMNFNNSSFNDETCIMMLNMFDKTKSGRVDVFGFSALWTFLQQWRAAFQQFDRDRSGSINTNEMHQALSQMGYNLSPQFIQELVNRYSVRGG-TGVLQLDRFIQVCTQLQSMTQAFREKDTGMTGNVRMSYEDFL 262
BLAST of CX292449 vs. ExPASy Swiss-Prot
Match: PEF1_XENLA (Peflin OS=Xenopus laevis GN=pef1 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 3.200e-22 Identity = 53/151 (35.10%), Postives = 93/151 (61.59%), Query Frame = 2 Query: 8 DRDNSGLIDDKELQGALSSYN-QSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTRFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFM 457 D D+SG I KEL+ AL + N SF+ T ++M F +N+ +I F ++ +Q WR +F++ DRDRSG I+ EL +AL +G+ +SP + ++++R+ + + ++ D FI+ C ++ +TE F+E+DT G+A +YE+F+ Sbjct: 126 DTDHSGYISLKELKQALVNTNWSSFNDETCTMMMNMFDKSNSGRIDMFGFSALWRFIQQWRNLFQQYDRDRSGSINQGELHQALCQMGYQLSPQFVQIVMSRYAQRSAQ-PGLQLDRFIQICTQLQSMTEAFREKDTGQIGTAKLSYEDFI 275
BLAST of CX292449 vs. ExPASy Swiss-Prot
Match: SORCN_SCHJA (Sorcin OS=Schistosoma japonicum PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.709e-21 Identity = 55/151 (36.42%), Postives = 86/151 (56.95%), Query Frame = 2 Query: 8 DRDNSGLIDDKELQGALSS-YNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTRFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFM 457 D D SG I ELQ +LS+ ++RTV+L++ F I EF+ +F +Q+W+ F + DRD SG ID NE AL+S G+ +SP ++L++ RFD+ G +I +D+FI C+ ++ LT +F D G F++E F+ Sbjct: 16 DADKSGSISANELQTSLSNGLGTPLNIRTVQLMVAMFDRDMNGTINFNEFLGLFKYVQDWQTCFRRYDRDNSGSIDLNEFSNALISFGYHLSPQFVNLMMRRFDRNRG---SIAFDDFIYACVCLQTLTREFSRYDCRGIGHTVFSFEQFL 163
BLAST of CX292449 vs. ExPASy Swiss-Prot
Match: PEF1_MOUSE (Peflin OS=Mus musculus GN=Pef1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.709e-21 Identity = 57/151 (37.75%), Postives = 90/151 (59.60%), Query Frame = 2 Query: 8 DRDNSGLIDDKELQGALSSYN-QSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTRFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFM 457 D D+SG I KEL+ AL + N SF+ T +++ F T + +I F ++ LQ WR +F++ DRDRSG I S EL++AL +G+ +SP LLV+R+ A++ D FI+ C ++ LTE F+E+DT G+ ++E+F+ Sbjct: 118 DADHSGYISLKELKQALVNSNWSSFNDETCLMMINMFDKTKSGRIDVAGFSALWKFLQQWRNLFQQYDRDRSGSISSTELQQALSQMGYNLSPQFTQLLVSRYCARSA-IPAMQLDCFIKVCTQLQVLTEAFREKDTAVQGNIRLSFEDFV 267
BLAST of CX292449 vs. ExPASy Swiss-Prot
Match: PDCD6_MOUSE (Programmed cell death protein 6 OS=Mus musculus GN=Pdcd6 PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 3.538e-21 Identity = 55/151 (36.42%), Postives = 87/151 (57.62%), Query Frame = 2 Query: 8 DRDNSGLIDDKELQGALSSYNQS-FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTRFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFM 457 D+D SG+I D ELQ ALS+ + F+ TVR ++ F N + EF V+ + +W+ +F DRD SG ID NEL++AL G+ +S D+L+ +FD+ G I +D+FI+ C+ ++ LT+ F+ DT G +YE ++ Sbjct: 36 DKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQG--RGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYL 184
BLAST of CX292449 vs. ExPASy Swiss-Prot
Match: PDCD6_HUMAN (Programmed cell death protein 6 OS=Homo sapiens GN=PDCD6 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 4.621e-21 Identity = 55/151 (36.42%), Postives = 87/151 (57.62%), Query Frame = 2 Query: 8 DRDNSGLIDDKELQGALSSYNQS-FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTRFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFM 457 D+D SG+I D ELQ ALS+ + F+ TVR ++ F N + EF V+ + +W+ +F DRD SG ID NEL++AL G+ +S D+L+ +FD+ G I +D+FI+ C+ ++ LT+ F+ DT G +YE ++ Sbjct: 36 DKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQG--RGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYL 184
BLAST of CX292449 vs. ExPASy Swiss-Prot
Match: PEF1_HUMAN (Peflin OS=Homo sapiens GN=PEF1 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 7.882e-21 Identity = 54/151 (35.76%), Postives = 90/151 (59.60%), Query Frame = 2 Query: 8 DRDNSGLIDDKELQGALSSYN-QSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTRFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFM 457 D D+SG I KEL+ AL + N SF+ T +++ F T + +I F ++ +Q W+ +F++ DRDRSG I EL++AL +G+ +SP LLV+R+ + A++ D FI+ C ++ LTE F+E+DT G+ ++E+F+ Sbjct: 127 DSDHSGYISMKELKQALVNCNWSSFNDETCLMMINMFDKTKSGRIDVYGFSALWKFIQQWKNLFQQYDRDRSGSISYTELQQALSQMGYNLSPQFTQLLVSRYCPRSA-NPAMQLDRFIQVCTQLQVLTEAFREKDTAVQGNIRLSFEDFV 276 The following BLAST results are available for this feature:
BLAST of CX292449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292449 ID=CX292449; Name=CX292449; organism=Citrus clementina; type=EST; length=461bpback to top |