CX292454

Overview
NameCX292454
Unique NameCX292454
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length669
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX292454 vs. ExPASy Swiss-Prot
Match: NLT1_CAEEL (Non-specific lipid-transfer protein-like OS=Caenorhabditis elegans GN=nlt-1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12
Identity = 44/118 (37.29%), Postives = 65/118 (55.08%), Query Frame = 1 
Query:   61 KSDALLEQMKQHLSTDAGKAVVKKLGLVYQINIAPKKMGFDEVT--YTVDLKKGEVTKGSYEGGKPDATFTFKDDDFVKVATGKMNPQIAFMRGLMKVKGSLSAAQKFTPDLFPKPSK 408
            KSD + E++K+ ++TD  K +VKK+G  +++ IA    G D  T  +T+D K      G       +     KD DF+ +A GKM P  AFM+G MK+KG+++ A K    L PK  K
Sbjct:    4 KSDVIFEEIKERIATD--KEMVKKVGTSFRMTIA----GADGKTKVWTIDAKSDTPYVGDDSSRPVEIEINIKDSDFIAIAAGKMKPDQAFMQGKMKLKGNIAKAMKLRTILDPKMLK 115
The following BLAST results are available for this feature:
BLAST of CX292454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NLT1_CAEEL1.843e-1237.29Non-specific lipid-transfer protein-like OS=Caenor... [more]
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Properties
Property NameValue
Genbank descriptionC04015H09SK FlavFr1 Citrus clementina cDNA clone C04015H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292454 ID=CX292454; Name=CX292454; organism=Citrus clementina; type=EST; length=669bp
GTGTAAGCTGCAATTGCAAAGATCAAGAAGTCATTATTCATGGCTGACTC
AACTCAACTCAAGTCGGATGCTCTGCTAGAACAGATGAAACAACACCTCA
GCACCGATGCCGGTAAAGCCGTTGTCAAGAAATTGGGCCTTGTTTATCAG
ATCAATATTGCACCCAAGAAAATGGGATTTGATGAGGTTACTTATACTGT
TGATCTTAAGAAAGGAGAAGTCACCAAAGGTTCTTATGAGGGAGGAAAGC
CCGATGCTACGTTTACCTTCAAGGATGACGATTTTGTCAAGGTTGCCACT
GGAAAGATGAATCCCCAGATTGCTTTCATGAGGGGTCTAATGAAAGTTAA
AGGCAGTCTTAGTGCGGCACAGAAGTTTACCCCTGATCTTTTCCCTAAGC
CTTCAAAGATGTGAGCAGATACCTTAAAGAGGGTTACTTGCATTACAGTT
CTATCATTTTGGCCTCTGAAGTGGTACATTTAGGCTATAGATTACAAGGA
TAGCAAATATCTCTGGAACTTGTCCATCAGAATGAAGAATCTGTCAGTTG
ATGATAAATCAATGGTACCTTATGTATTTGTTAATCAATGTTGCACTTGT
TTATTGGATTAAAAATGATGTCATATGATGGACTTGTCTTATCATTGATT
TATTTTCTTTAAAATAAAA
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