CX292473

Overview
NameCX292473
Unique NameCX292473
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292473 vs. ExPASy Swiss-Prot
Match: PMGI_MESCR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mesembryanthemum crystallinum GN=PGM1 PE=2 SV=1)

HSP 1 Score: 429.483 bits (1103), Expect = 8.602e-120
Identity = 210/231 (90.91%), Postives = 223/231 (96.54%), Query Frame = 2
Query:    2 IGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPSEIDRTSGEYLVHNGVRTFACSETVK 694
            IGLLSDGGVHSRLDQLQLLLKG++ERGAKRIR+HILTDGRDVLDGSSVGFVET+E DLA+LR KGVDAQIASGGGRMYVTMDRYENDW VVKRGWDAQVLGEAP+KFK+AVEAVK LR++P ANDQYLPPFV+VDE+GKAVGPIVDGDAVVT NFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLP+ YLVSP EI+RTSGEYLVHNGVRTFACSETVK
Sbjct:  131 IGLLSDGGVHSRLDQLQLLLKGSAERGAKRIRVHILTDGRDVLDGSSVGFVETLENDLAQLRAKGVDAQIASGGGRMYVTMDRYENDWSVVKRGWDAQVLGEAPYKFKNAVEAVKTLRQEPKANDQYLPPFVVVDESGKAVGPIVDGDAVVTLNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPNRYLVSPPEIERTSGEYLVHNGVRTFACSETVK 361          
BLAST of CX292473 vs. ExPASy Swiss-Prot
Match: PMGI_RICCO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ricinus communis PE=1 SV=2)

HSP 1 Score: 424.091 bits (1089), Expect = 3.614e-118
Identity = 206/231 (89.18%), Postives = 219/231 (94.81%), Query Frame = 2
Query:    2 IGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPSEIDRTSGEYLVHNGVRTFACSETVK 694
            IGLLSDGGVHSRLDQLQLLLKGA+E GAKRIR+H+LTDGRDV+DG+SVGF ET+EKDL  LR KGVDAQ+ASGGGRMYVTMDRYENDW+VVKRGWDAQVLGEAP+KFKSAVEA+KKLRE+P ANDQYLPPFVIVDENGK VGPIVDGDAVVT NFRADRMVMLAKALEYE+FD FDRVRFPKI YAGMLQYDGELKLPSHYLVSP EI+RTSGEYLVHNGV TFACSETVK
Sbjct:  128 IGLLSDGGVHSRLDQLQLLLKGAAEHGAKRIRVHVLTDGRDVIDGTSVGFAETLEKDLENLREKGVDAQVASGGGRMYVTMDRYENDWNVVKRGWDAQVLGEAPYKFKSAVEAIKKLREEPKANDQYLPPFVIVDENGKPVGPIVDGDAVVTINFRADRMVMLAKALEYENFDTFDRVRFPKIHYAGMLQYDGELKLPSHYLVSPPEIERTSGEYLVHNGVHTFACSETVK 358          
BLAST of CX292473 vs. ExPASy Swiss-Prot
Match: PMG1_ARATH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 OS=Arabidopsis thaliana GN=PGM1 PE=2 SV=3)

HSP 1 Score: 421.779 bits (1083), Expect = 1.794e-117
Identity = 206/231 (89.18%), Postives = 219/231 (94.81%), Query Frame = 2
Query:    2 IGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPSEIDRTSGEYLVHNGVRTFACSETVK 694
            +GLLSDGGVHSRLDQLQLL+KG++ERGAKRIR+HILTDGRDVLDGSSVGFVET+E DL  LR  GVDAQIASGGGRMYVT+DRYENDW+VVKRGWDAQVLGEAPHKFK+AVEAVK LR++P ANDQYLPPFVIVDE+GKAVGPIVDGDAVVTFNFRADRMVM AKALEYEDFDKFDRVR+PKIRYAGMLQYDGELKLPS YLVSP EIDRTSGEYL HNGV TFACSETVK
Sbjct:  130 VGLLSDGGVHSRLDQLQLLIKGSAERGAKRIRVHILTDGRDVLDGSSVGFVETLEADLVALRENGVDAQIASGGGRMYVTLDRYENDWEVVKRGWDAQVLGEAPHKFKNAVEAVKTLRKEPGANDQYLPPFVIVDESGKAVGPIVDGDAVVTFNFRADRMVMHAKALEYEDFDKFDRVRYPKIRYAGMLQYDGELKLPSRYLVSPPEIDRTSGEYLTHNGVSTFACSETVK 360          
BLAST of CX292473 vs. ExPASy Swiss-Prot
Match: PMGI_PRUDU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Fragment) OS=Prunus dulcis PE=2 SV=1)

HSP 1 Score: 419.083 bits (1076), Expect = 1.163e-116
Identity = 206/231 (89.18%), Postives = 217/231 (93.94%), Query Frame = 2
Query:    2 IGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPSEIDRTSGEYLVHNGVRTFACSETVK 694
            IGLLSDGGVHSRLDQL LL+KGASERGAKRIR+HILTDGRDVLDGSSVGF ET+E  LA+LR KGVDAQIASGGGRMYVTMDRYENDW VVKRGWDAQVLGEAPHKFK+AVEA+K LR++PN +DQYLPPFVIVDENGK VGPIVDGDAVVTFNFRADRMVM+AKALEY DFDKFDRVRFPKIRYAGMLQYDGELKLPS YLV P EIDRTSGEYL +NGVRTFACSETVK
Sbjct:   60 IGLLSDGGVHSRLDQLLLLVKGASERGAKRIRVHILTDGRDVLDGSSVGFAETLENYLAQLREKGVDAQIASGGGRMYVTMDRYENDWGVVKRGWDAQVLGEAPHKFKNAVEAIKTLRQEPNTSDQYLPPFVIVDENGKPVGPIVDGDAVVTFNFRADRMVMIAKALEYADFDKFDRVRFPKIRYAGMLQYDGELKLPSKYLVEPPEIDRTSGEYLTYNGVRTFACSETVK 290          
BLAST of CX292473 vs. ExPASy Swiss-Prot
Match: PMGI_MAIZE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Zea mays PE=1 SV=1)

HSP 1 Score: 417.927 bits (1073), Expect = 2.590e-116
Identity = 205/231 (88.74%), Postives = 216/231 (93.51%), Query Frame = 2
Query:    2 IGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPSEIDRTSGEYLVHNGVRTFACSETVK 694
            IGLLSDGGVHSRLDQLQLLLKG SERGAK+IR+HILTDGRDVLDGSS+GFVET+E DL ELR KGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAP+KFKSA+EAVK LR QP ANDQYLPPFVIVD++G AVGP++DGDAVVT NFRADRMVMLAKALEY DFD FDRVR PKIRYAGMLQYDGELKLPS YLVSP EIDRTSGEYLV NG+RTFACSETVK
Sbjct:  131 IGLLSDGGVHSRLDQLQLLLKGVSERGAKKIRVHILTDGRDVLDGSSIGFVETLENDLLELRAKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPYKFKSALEAVKTLRAQPKANDQYLPPFVIVDDSGNAVGPVLDGDAVVTINFRADRMVMLAKALEYADFDNFDRVRVPKIRYAGMLQYDGELKLPSRYLVSPPEIDRTSGEYLVKNGIRTFACSETVK 361          
BLAST of CX292473 vs. ExPASy Swiss-Prot
Match: PMG2_ARATH (Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Arabidopsis thaliana GN=At3g08590 PE=2 SV=1)

HSP 1 Score: 415.616 bits (1067), Expect = 1.285e-115
Identity = 206/231 (89.18%), Postives = 215/231 (93.07%), Query Frame = 2
Query:    2 IGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPSEIDRTSGEYLVHNGVRTFACSETVK 694
            IGLLSDGGVHSRLDQ+QLLLKG +ERGAKRIR+HILTDGRDVLDGSSVGFVET+E DLA LR KGVDAQ+ASGGGRMYVTMDRYENDW VVKRGWDAQVLGEAPHKFKSA+EAVK LR +P ANDQYLP FVIVD+NGKAVGPIVDGDAVVTFNFRADRMVM AKALEY+DFDKFDRVR P IRYAGMLQYDGELKLPS YLVSP  IDRTSGEYL HNGVRTFACSETVK
Sbjct:  132 IGLLSDGGVHSRLDQVQLLLKGFAERGAKRIRVHILTDGRDVLDGSSVGFVETLEADLAALRAKGVDAQVASGGGRMYVTMDRYENDWSVVKRGWDAQVLGEAPHKFKSALEAVKTLRAEPGANDQYLPSFVIVDDNGKAVGPIVDGDAVVTFNFRADRMVMHAKALEYKDFDKFDRVRVPDIRYAGMLQYDGELKLPSRYLVSPPLIDRTSGEYLAHNGVRTFACSETVK 362          
BLAST of CX292473 vs. ExPASy Swiss-Prot
Match: PMGI_TOBAC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 405.986 bits (1042), Expect = 1.019e-112
Identity = 199/231 (86.15%), Postives = 214/231 (92.64%), Query Frame = 2
Query:    2 IGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPSEIDRTSGEYLVHNGVRTFACSETVK 694
            IGLLSDGGVHSRLDQ+QLLLKGA++ GAKRIR+H LTDGRDVLDGSSVGF+ET+E  LA+LR KG+DAQ+ASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFK  VEAVKKLR++PNANDQYL PFVIVD+NGK V  I+DGDAVVTFNFRADRMVMLAKALEYE+FDKFDRVR PKIRYAGMLQY GEL+LPSHYLVSP EI R SGEYLV NGVRTFACSETVK
Sbjct:  131 IGLLSDGGVHSRLDQVQLLLKGAAKHGAKRIRVHALTDGRDVLDGSSVGFMETLENSLAQLREKGIDAQVASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKDPVEAVKKLRQEPNANDQYLAPFVIVDDNGKPVAAILDGDAVVTFNFRADRMVMLAKALEYENFDKFDRVRVPKIRYAGMLQYHGELQLPSHYLVSPPEIARHSGEYLVRNGVRTFACSETVK 361          
BLAST of CX292473 vs. ExPASy Swiss-Prot
Match: GPMI_LEPIN (Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Leptospira interrogans GN=gpmI PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.464e-58
Identity = 119/232 (51.29%), Postives = 152/232 (65.52%), Query Frame = 2
Query:    2 IGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLR-EQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPSEIDRTSGEYLVHNGVRTFACSETVK 694
            +GL SDG VHS +D  + L+  A      +IRLHIL DGRDV + S++ ++   E  L  LR  G D +IASGGGRM +TMDRYE DW +V+RGW   V GE  + F SA EA++  R E P   DQYLP FVI D NGK VG I DGD+VV  NFR DR + ++ A   ++FDKFDR   P + YAG++QYDG+LKLP  +LV+P  IDRT GEY+  + +  +A SET K
Sbjct:  129 LGLFSDGNVHSHIDHTKALISQAILEKVPKIRLHILLDGRDVPEKSALDYLNPFETWLDSLRKSGTDIRIASGGGRMTITMDRYEADWSMVERGWKVHVKGEGRY-FSSAKEAIETFRSENPKIIDQYLPSFVISD-NGKPVGKIQDGDSVVFTNFRGDRAIEISLAFTEKNFDKFDRGPLPNVLYAGIMQYDGDLKLPERFLVAPPAIDRTLGEYMASSNIPQYALSETQK 358          
BLAST of CX292473 vs. ExPASy Swiss-Prot
Match: GPMI_LEPIC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gpmI PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.464e-58
Identity = 119/232 (51.29%), Postives = 152/232 (65.52%), Query Frame = 2
Query:    2 IGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLR-EQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPSEIDRTSGEYLVHNGVRTFACSETVK 694
            +GL SDG VHS +D  + L+  A      +IRLHIL DGRDV + S++ ++   E  L  LR  G D +IASGGGRM +TMDRYE DW +V+RGW   V GE  + F SA EA++  R E P   DQYLP FVI D NGK VG I DGD+VV  NFR DR + ++ A   ++FDKFDR   P + YAG++QYDG+LKLP  +LV+P  IDRT GEY+  + +  +A SET K
Sbjct:  129 LGLFSDGNVHSHIDHTKALISQAILEKVPKIRLHILLDGRDVPEKSALDYLNPFETWLNSLRKSGTDIRIASGGGRMTITMDRYEADWSMVERGWKVHVKGEGRY-FSSAKEAIETFRSENPKIIDQYLPSFVISD-NGKPVGKIQDGDSVVFTNFRGDRAIEISLAFTEKNFDKFDRGPLPNVLYAGIMQYDGDLKLPERFLVAPPAIDRTLGEYMASSNIPQYALSETQK 358          
BLAST of CX292473 vs. ExPASy Swiss-Prot
Match: GPMI_MYXXD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Myxococcus xanthus (strain DK 1622) GN=gpmI PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.042e-32
Identity = 91/231 (39.39%), Postives = 125/231 (54.11%), Query Frame = 2
Query:    2 IGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPSEIDRTSGEYLVHNGVRTFACSETVK 694
            +GL+S GGVHS +D L  LLK A ER    + +H   DGRD    S++G+VE +E+ L E        +IA+  GR Y  MDR +  WD V + ++A V G  P K   A+ A++    +    D+++ P V+   +G  VG I DGDAV+ FNFRADR   L +AL + +F +FDR      RY  M QYD   KLP+  L  P +      E L   G+R F  +ET K
Sbjct:  115 LGLVSPGGVHSSMDHLFALLKAAKERNVAHVYVHAFLDGRDTPPQSALGYVEELERFLHETH----TGRIATVTGRFYA-MDR-DKRWDRVHQAYEALVFGRGP-KAPDALSAIRASYAE-KVTDEFVKPTVLAAGDGTPVGRIQDGDAVIFFNFRADRARELTQALAFPEFKEFDRGGLRLGRYVCMTQYDETFKLPA--LFEPDQPQDIFPELLSRQGLRQFRTAETEK 335          
The following BLAST results are available for this feature:
BLAST of CX292473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
PMGI_MESCR8.602e-12090.912,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_RICCO3.614e-11889.182,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMG1_ARATH1.794e-11789.182,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_PRUDU1.163e-11689.182,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_MAIZE2.590e-11688.742,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMG2_ARATH1.285e-11589.18Probable 2,3-bisphosphoglycerate-independent phosp... [more]
PMGI_TOBAC1.019e-11286.152,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LEPIN2.464e-5851.29Probable 2,3-bisphosphoglycerate-independent phosp... [more]
GPMI_LEPIC2.464e-5851.292,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYXXD1.042e-3239.392,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionC04016B05SK FlavFr1 Citrus clementina cDNA clone C04016B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292473 ID=CX292473; Name=CX292473; organism=Citrus clementina; type=EST; length=707bp
TATTGGGTTACTGAGTGATGGTGGAGTACACTCTAGGCTTGATCAACTTC
AGTTGTTGCTAAAAGGAGCTAGTGAGCGTGGTGCTAAAAGAATTCGTCTT
CATATTCTTACTGACGGGCGTGATGTTTTGGATGGTTCAAGCGTAGGATT
CGTAGAAACTATTGAGAAAGATCTTGCAGAATTGCGTGGGAAAGGTGTTG
ACGCACAGATTGCATCTGGAGGAGGCCGCATGTACGTCACGATGGACCGT
TATGAGAATGATTGGGATGTTGTCAAACGAGGATGGGATGCCCAAGTTCT
TGGAGAAGCTCCACACAAGTTTAAGAGCGCCGTTGAAGCTGTCAAAAAAC
TAAGGGAACAGCCCAATGCCAATGACCAGTACTTACCTCCATTTGTCATT
GTTGATGAAAATGGAAAGGCTGTGGGTCCAATAGTAGATGGTGATGCAGT
TGTAACTTTCAACTTCCGAGCTGATCGAATGGTTATGCTTGCTAAGGCCC
TTGAATATGAAGATTTTGACAAATTTGATCGAGTTCGGTTCCCTAAAATC
CGTTATGCTGGAATGCTTCAATATGATGGGGAGTTGAAACTTCCCAGTCA
TTACCTTGTGTCTCCCTCAGAGATAGACAGAACATCTGGTGAATATTTAG
TGCATAATGGTGTCCGTACTTTTGCTTGCAGTGAGACTGTCAAGTTGGAC
ATGTCAC
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