CX292499
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292499 vs. ExPASy Swiss-Prot
Match: ASP1_ORYSJ (Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 7.562e-17 Identity = 48/126 (38.10%), Postives = 63/126 (50.00%), Query Frame = 3 Query: 99 TTHLESAELLFGGKTTGLKNLPLVFDSGSSYTYLSHVAYQ-TLTSTDEERN*AAKSLKEAPE-DRTLPLCWKGKRPFQKCA*CQEV--TFKALALSFHLMGKLELFFELTPEAYLIISNRGNVLLG 464 T H +S K + ++FDSG++YTY + YQ TL+ N K L E E DR L +CWKGK K EV F++L+L F G + E+ PE YLIIS G+V LG Sbjct: 237 TLHFDS-----NSKAISAAPMAVIFDSGATYTYFAAQPYQATLSVVKSTLNSECKFLTEVTEKDRALTVCWKGK---DKIVTIDEVKKCFRSLSLEF-ADGDKKATLEIPPEHYLIISQEGHVCLG 353 HSP 2 Score: 44.2838 bits (103), Expect = 7.562e-17 Identity = 23/57 (40.35%), Postives = 37/57 (64.91%), Query Frame = 1 Query: 457 CLGILNGAEVGLQDLNCHR-RYYSMQDRVVIYDNEKQRIGWMPAICDRIPKSKAMNT 624 CLGIL+G++ L + +M D++VIYD+E+ +GW+ CDRIP+S++ T Sbjct: 351 CLGILDGSKEHLSLAGTNLIGGITMLDQMVIYDSERSLLGWVNYQCDRIPRSESAIT 407
BLAST of CX292499 vs. ExPASy Swiss-Prot
Match: ASP1_ORYSI (Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2) HSP 1 Score: 58.151 bits (139), Expect = 1.429e-14 Identity = 42/106 (39.62%), Postives = 57/106 (53.77%), Query Frame = 3 Query: 159 LPLVFDSGSSYTYLSHVAYQ-TLTSTDEERN*AAKSLKEAPE-DRTLPLCWKGKRPFQKCA*CQEV--TFKALALSFHLMGKLELFFELTPEAYLIISNRGNVLLG 464 + ++FDSG++YTY + Y TL+ + K L E E DR L +CWKGK K EV F++L+L F G + E+ PE YLIIS G+V LG Sbjct: 252 MEVIFDSGATYTYFALQPYHATLSVVKSTLSKECKFLTEVKEKDRALTVCWKGK---DKIRTIDEVKKCFRSLSLKF-ADGDKKATLEIPPEHYLIISQEGHVCLG 353 HSP 2 Score: 41.9726 bits (97), Expect = 1.429e-14 Identity = 24/58 (41.38%), Postives = 36/58 (62.07%), Query Frame = 1 Query: 457 CLGILNGAEV--GLQDLNCHRRYYSMQDRVVIYDNEKQRIGWMPAICDRIPKSKAMNT 624 CLGIL+G++ L N +M D++VIYD+E+ +GW+ CDRIP+S + T Sbjct: 351 CLGILDGSKEHPSLAGTNLIGGI-TMLDQMVIYDSERSLLGWVNYQCDRIPRSASAIT 407 The following BLAST results are available for this feature:
BLAST of CX292499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX292499 ID=CX292499; Name=CX292499; organism=Citrus clementina; type=EST; length=635bpback to top |