CX292507

Overview
NameCX292507
Unique NameCX292507
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length648
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX292507 vs. ExPASy Swiss-Prot
Match: ZFP1_WHEAT (Zinc finger protein 1 OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.263e-19
Identity = 66/191 (34.55%), Postives = 81/191 (42.41%), Query Frame = 2 
Query:  110 ALEALNSPTTNTHNHHPFRYEDSWTKRRRSKRPRTDESPPLPPAVAAPTEEEYMALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSVCNKAFSSYQALGGHKASHR------------KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHECSICHKSFPTGQALGGHKRCH 646
            A  A++S T+   + H  +    W KR+RS+R R+              EEE +ALCL+ML+RG      AP              + F  P  +   +KCSVC K+FSSYQALGGHK SHR                                              H CSIC K FPTGQALGGHKR H
Sbjct:   23 AAAAVSSATSGEESGHVLQ---GWAKRKRSRRQRS--------------EEENLALCLLMLSRGGKQRVQAPQP------------ESFAAP--VPAEFKCSVCGKSFSSYQALGGHKTSHRVKQPSPPSDAAAAPLVALPAVAAILPSAEPATSSTAASSDGATNRVHRCSICQKEFPTGQALGGHKRKH 182
The following BLAST results are available for this feature:
BLAST of CX292507 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ZFP1_WHEAT7.263e-1934.55Zinc finger protein 1 OS=Triticum aestivum PE=2 SV... [more]
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Properties
Property NameValue
Genbank descriptionC04016E03SK FlavFr1 Citrus clementina cDNA clone C04016E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292507 ID=CX292507; Name=CX292507; organism=Citrus clementina; type=EST; length=648bp
CCTCTCTTCTCCTGCTCTCTCTCTCTCTCTCTCTCTCTCGAAACTCAACA
GATTCAACCACAAGAGTCGAGAATTCACCTACAAGAAAAGAAAAAAATTC
ACGACTATGGCTCTAGAAGCTCTAAACTCTCCTACAACAAACACCCACAA
TCATCATCCGTTTAGATACGAAGACTCATGGACTAAAAGAAGGCGCTCAA
AACGACCCCGTACCGACGAGTCCCCACCACTGCCACCAGCAGTAGCAGCT
CCCACAGAAGAAGAGTACATGGCTCTCTGTCTCATCATGCTCGCCCGCGG
TACCACCACCGCCAACACCGCTCCAGCCGAAAGAACCCCATCCCTGGCGC
CGGAACAGCGGCCGCAGGATCAGTTCCCGGAGCCGCCAAGTTTGAAACTT
TCTTACAAGTGCAGTGTGTGCAACAAGGCTTTCTCTTCTTACCAGGCCCT
TGGTGGGCACAAAGCCAGCCACCGCAAGAACGCTGCTGACGCCTCGGCTT
CTCCCAACGCCGCAGCCGCCAGTGACGTCACCCCACCACCGTCAGCAACG
GCGAGCAGCGGAAGCGGCGGTAGGACCCACGAGTGCTCTATTTGTCACAA
GTCTTTTCCCACTGGACAAGCTCTAGGAGGCCACAAGCGGTGTCACTA
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