CX292510

Overview
NameCX292510
Unique NameCX292510
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292510 vs. ExPASy Swiss-Prot
Match: RBOHC_ARATH (Respiratory burst oxidase homolog protein C OS=Arabidopsis thaliana GN=RBOHC PE=2 SV=2)

HSP 1 Score: 288.886 bits (738), Expect = 1.851e-77
Identity = 140/197 (71.07%), Postives = 156/197 (79.19%), Query Frame = 2
Query:    5 GTRPMISIVKDIVNNMKAIXXXXXNDLENGRDTGVNXXXXXXXXXXXXXXXGHRRRDQFRTRRAYFYWVTREQGSFDWFKGVMNEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 595
            G  PMISIVKDIVNN+KA      N +ENG                        +++ FRTRRAYFYWVTREQGSFDWFK +MNEVAE D N VIE+HNYCTSVYEEGDARSALI MLQSLNHAKNGVD+VSGTRV SHFAKPNWRNVYKR+A++HP+++VGVFYCGAPALTKELRHLALDF+HKTST+F FHKENF
Sbjct:  726 GATPMISIVKDIVNNIKAKEQAQLNRMENGTSE-----------------PQRSKKESFRTRRAYFYWVTREQGSFDWFKNIMNEVAERDANRVIEMHNYCTSVYEEGDARSALIHMLQSLNHAKNGVDIVSGTRVMSHFAKPNWRNVYKRIAMDHPNTKVGVFYCGAPALTKELRHLALDFTHKTSTRFSFHKENF 905          
BLAST of CX292510 vs. ExPASy Swiss-Prot
Match: RBOHC_SOLTU (Respiratory burst oxidase homolog protein C OS=Solanum tuberosum GN=RBOHC PE=1 SV=2)

HSP 1 Score: 286.574 bits (732), Expect = 9.189e-77
Identity = 141/198 (71.21%), Postives = 156/198 (78.79%), Query Frame = 2
Query:    5 GTRPMISIVKDIVNNMKAIXXXXXNDLENGRD-TGVNXXXXXXXXXXXXXXXGHRRRDQFRTRRAYFYWVTREQGSFDWFKGVMNEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 595
            G  PMISIVKDIVNNMKA+     N LENG   +                       + F TRRAYFYWVTREQGSFDWFKG+MNE AE+DH  VIE+HNYCTSVYEEGDARSALI MLQSL+HAK+GVD+VSGTRVKSHFAKPNWRNVYKR+ALNHP+++VGVFYCGAPALTKEL+  AL+FSHKTSTKFDFHKENF
Sbjct:  742 GATPMISIVKDIVNNMKAMDEEE-NSLENGNGMSNAAQNASPNMAQKRGKSSSASGGNSFNTRRAYFYWVTREQGSFDWFKGIMNEAAEMDHKGVIEMHNYCTSVYEEGDARSALITMLQSLHHAKSGVDIVSGTRVKSHFAKPNWRNVYKRIALNHPEAKVGVFYCGAPALTKELKQHALNFSHKTSTKFDFHKENF 938          
BLAST of CX292510 vs. ExPASy Swiss-Prot
Match: RBOHA_ARATH (Respiratory burst oxidase homolog protein A OS=Arabidopsis thaliana GN=RBOHA PE=2 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 6.815e-72
Identity = 132/197 (67.01%), Postives = 148/197 (75.13%), Query Frame = 2
Query:    5 GTRPMISIVKDIVNNMKAIXXXXXNDLENGRDTGVNXXXXXXXXXXXXXXXGHRRRDQFRTRRAYFYWVTREQGSFDWFKGVMNEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 595
            G  PMISIV DI+NN+K +            + G N                 R+ + FRT+RAYFYWVTREQGSFDWFK VM+EV E D  NVIELHNYCTSVYEEGDARSALI MLQSLNHAK+GVDVVSGTRV SHFA+PNWR+V+KR+A+NHP +RVGVFYCGA  L KELRHL+LDFSHKTSTKF FHKENF
Sbjct:  718 GATPMISIVSDIINNLKGV------------EEGSNRRQSPIHNMVTPPVSPSRKSETFRTKRAYFYWVTREQGSFDWFKNVMDEVTETDRKNVIELHNYCTSVYEEGDARSALITMLQSLNHAKHGVDVVSGTRVMSHFARPNWRSVFKRIAVNHPKTRVGVFYCGAAGLVKELRHLSLDFSHKTSTKFIFHKENF 902          
BLAST of CX292510 vs. ExPASy Swiss-Prot
Match: RBOHD_SOLTU (Respiratory burst oxidase homolog protein D OS=Solanum tuberosum GN=RBOHD PE=1 SV=2)

HSP 1 Score: 268.47 bits (685), Expect = 2.590e-71
Identity = 136/197 (69.04%), Postives = 151/197 (76.65%), Query Frame = 2
Query:    5 GTRPMISIVKDIVNNMKAIXXXXXNDLENGRDTGVNXXXXXXXXXXXXXXXGHRRRDQFRTRRAYFYWVTREQGSFDWFKGVMNEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 595
            G  PMISIVKDIVNNMK       +DLE    +G                     R  F+  R YFYWVTREQGSFDWFKG+MNE+A +D + +IE+HNYCTSVYEEGDARSALIAMLQS+NHAKNGVD+VSGTRVK+HFA+PNWRNVYKR+ALNH D+RVGVFYCGAPALTK L  LALDFSHKTSTKFDFHKENF
Sbjct:  685 GATPMISIVKDIVNNMKE--EKYDHDLEKKTVSGSG-------------------RSNFK--RVYFYWVTREQGSFDWFKGLMNELAVMDCDGIIEMHNYCTSVYEEGDARSALIAMLQSINHAKNGVDIVSGTRVKTHFARPNWRNVYKRIALNHTDARVGVFYCGAPALTKVLGQLALDFSHKTSTKFDFHKENF 858          
BLAST of CX292510 vs. ExPASy Swiss-Prot
Match: RBOHD_ARATH (Respiratory burst oxidase homolog protein D OS=Arabidopsis thaliana GN=RBOHD PE=1 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.856e-69
Identity = 126/197 (63.96%), Postives = 147/197 (74.62%), Query Frame = 2
Query:    5 GTRPMISIVKDIVNNMKAIXXXXXNDLENGRDTGVNXXXXXXXXXXXXXXXGHRRRDQFRTRRAYFYWVTREQGSFDWFKGVMNEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 595
            G  PMISI+KDI+NNMK       +D+EN                       +     F+TR+AYFYWVTREQGSF+WFKG+M+E++ELD   +IELHNYCTSVYEEGDAR ALIAMLQSL HAKNGVDVVSGTRVKSHFAKPNWR VYK++A+ HP  R+GVFYCG P + KEL++LALDFS KT+TKFDFHKENF
Sbjct:  747 GATPMISILKDIINNMKG--PDRDSDIENNNS--------------------NNNSKGFKTRKAYFYWVTREQGSFEWFKGIMDEISELDEEGIIELHNYCTSVYEEGDARVALIAMLQSLQHAKNGVDVVSGTRVKSHFAKPNWRQVYKKIAVQHPGKRIGVFYCGMPGMIKELKNLALDFSRKTTTKFDFHKENF 921          
BLAST of CX292510 vs. ExPASy Swiss-Prot
Match: RBOHG_ARATH (Putative respiratory burst oxidase homolog protein G OS=Arabidopsis thaliana GN=RBOHG PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 3.276e-66
Identity = 119/197 (60.41%), Postives = 147/197 (74.62%), Query Frame = 2
Query:    5 GTRPMISIVKDIVNNMKAIXXXXXNDLENGRDTGVNXXXXXXXXXXXXXXXGHRRRDQFRTRRAYFYWVTREQGSFDWFKGVMNEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 595
            G  PMISI+KDI+NN +       + +E G                         ++ F+TRRAYFYWVT+EQG+FDWFK +MNE+AE D + VIELHN+CTSVYEEGD RSALI MLQSLN+AKNG+D+V+GTRV SHFA+PNW+NVYK++A++HP + VGVFYCGAP LTKELR LAL+F+HKTST+F FHKENF
Sbjct:  686 GATPMISIIKDIINNTET--KEQLSQMEKGSPQEQQG-----------------NKETFKTRRAYFYWVTKEQGTFDWFKNIMNEIAERDKSKVIELHNHCTSVYEEGDVRSALIRMLQSLNYAKNGLDIVAGTRVMSHFARPNWKNVYKQIAMDHPGANVGVFYCGAPVLTKELRQLALEFTHKTSTRFSFHKENF 863          
BLAST of CX292510 vs. ExPASy Swiss-Prot
Match: RBOHB_SOLTU (Respiratory burst oxidase homolog protein B OS=Solanum tuberosum GN=RBOHB PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.773e-65
Identity = 120/197 (60.91%), Postives = 143/197 (72.59%), Query Frame = 2
Query:    5 GTRPMISIVKDIVNNMKAIXXXXXNDLENGRDTGVNXXXXXXXXXXXXXXXGHRRRDQFRTRRAYFYWVTREQGSFDWFKGVMNEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 595
            G  P+ISIVKD++NN+K        ++E+G                        +R  F T+RAYFYWVTREQGSF+WFKGVM+EV+E D   +IELHNYCTSVYEEGDARSALI MLQS+  AK+GVD+VSGTRVK+HFA+PNWR V+KRV +NHPD R+GVFYCG   L  ELRHL+ DFSHKT TKF+FHKENF
Sbjct:  696 GATPLISIVKDVLNNIKQ-----QKNIEDGTKGS--------------------KRSPFATKRAYFYWVTREQGSFEWFKGVMDEVSENDQEGLIELHNYCTSVYEEGDARSALITMLQSIQQAKSGVDIVSGTRVKTHFARPNWRQVFKRVTINHPDQRIGVFYCGPQGLVGELRHLSQDFSHKTGTKFEFHKENF 867          
BLAST of CX292510 vs. ExPASy Swiss-Prot
Match: RBOHB_ARATH (Respiratory burst oxidase homolog protein B OS=Arabidopsis thaliana GN=RBOHB PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.686e-60
Identity = 112/197 (56.85%), Postives = 141/197 (71.57%), Query Frame = 2
Query:    5 GTRPMISIVKDIVNNMKAIXXXXXNDLENGRDTGVNXXXXXXXXXXXXXXXGHRRRDQFRTRRAYFYWVTREQGSFDWFKGVMNEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 595
            G  P+ISI++D++NN+K       N +E G +  +                    ++   T+RAYFYWVTREQGS +WF  VMNEVAE D   +IELHNYCTSVYEEGDARSALI MLQSL+HAK+G+D+VSGTRV++HFA+PNWR+V+K VA+NH + RVGVFYCG   +  EL+ LA DFS KT+TKF+FHKENF
Sbjct:  672 GATPLISIIRDVLNNIK-----NQNSIERGTNQHI--------------------KNYVATKRAYFYWVTREQGSLEWFSEVMNEVAEYDSEGMIELHNYCTSVYEEGDARSALITMLQSLHHAKSGIDIVSGTRVRTHFARPNWRSVFKHVAVNHVNQRVGVFYCGNTCIIGELKRLAQDFSRKTTTKFEFHKENF 843          
BLAST of CX292510 vs. ExPASy Swiss-Prot
Match: RBOHA_SOLTU (Respiratory burst oxidase homolog protein A OS=Solanum tuberosum GN=RBOHA PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.288e-58
Identity = 108/197 (54.82%), Postives = 135/197 (68.53%), Query Frame = 2
Query:    5 GTRPMISIVKDIVNNMKAIXXXXXNDLENGRDTGVNXXXXXXXXXXXXXXXGHRRRDQFRTRRAYFYWVTREQGSFDWFKGVMNEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 595
            G  P ISI+KD++ N+  +      DL +      +                 +R+   +T  AYFYWVTREQGSFDWFKGVMNEVAELD   VIE+HNY TSVYEEGDARSALI M+Q+LNHAKNGVD+VSGT V++HFA+PNWR V+ +    H ++R+GVFYCGAP L KEL  L  +F+ K +TKF+FHKE+F
Sbjct:  769 GATPFISILKDLLKNI--VTMEEQADLVSDFSGNSDMSAATSEQPALNKISPKKRKSTLKTTNAYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTSVRTHFARPNWRKVFSKTLTKHANARIGVFYCGAPILAKELSKLCKEFNQKGTTKFEFHKEHF 963          
BLAST of CX292510 vs. ExPASy Swiss-Prot
Match: RBOHF_ARATH (Respiratory burst oxidase homolog protein F OS=Arabidopsis thaliana GN=RBOHF PE=1 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.630e-57
Identity = 112/201 (55.72%), Postives = 138/201 (68.66%), Query Frame = 2
Query:    5 GTRPMISIVKDIVNNMKAIXXXXXNDLENGRD----TGVNXXXXXXXXXXXXXXXGHRRRDQFRTRRAYFYWVTREQGSFDWFKGVMNEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 595
            G  P ISI+KD++NN+  +     +  +  R     TG N                 RR+   +T  AYFYWVTREQGSFDWFKGVMNEVAELD   VIE+HNY TSVYEEGDARSALI M+Q+LNHAKNGVD+VSGTRV++HFA+PNW+ V  +++  H ++R+GVFYCG P L KEL  L   F+ K STKF+FHKE+F
Sbjct:  757 GATPFISILKDLLNNIVKMEEHADSISDFSRSSEYSTGSNGDTP-------------RRKRILKTTNAYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRVRTHFARPNWKKVLTKLSSKHCNARIGVFYCGVPVLGKELSKLCNTFNQKGSTKFEFHKEHF 944          
The following BLAST results are available for this feature:
BLAST of CX292510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
RBOHC_ARATH1.851e-7771.07Respiratory burst oxidase homolog protein C OS=Ara... [more]
RBOHC_SOLTU9.189e-7771.21Respiratory burst oxidase homolog protein C OS=Sol... [more]
RBOHA_ARATH6.815e-7267.01Respiratory burst oxidase homolog protein A OS=Ara... [more]
RBOHD_SOLTU2.590e-7169.04Respiratory burst oxidase homolog protein D OS=Sol... [more]
RBOHD_ARATH1.856e-6963.96Respiratory burst oxidase homolog protein D OS=Ara... [more]
RBOHG_ARATH3.276e-6660.41Putative respiratory burst oxidase homolog protein... [more]
RBOHB_SOLTU2.773e-6560.91Respiratory burst oxidase homolog protein B OS=Sol... [more]
RBOHB_ARATH2.686e-6056.85Respiratory burst oxidase homolog protein B OS=Ara... [more]
RBOHA_SOLTU4.288e-5854.82Respiratory burst oxidase homolog protein A OS=Sol... [more]
RBOHF_ARATH1.630e-5755.72Respiratory burst oxidase homolog protein F OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC04016E06SK FlavFr1 Citrus clementina cDNA clone C04016E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292510 ID=CX292510; Name=CX292510; organism=Citrus clementina; type=EST; length=720bp
ATTCGGCACGAGGCCGATGATCAGCATTGTTAAAGACATAGTGAACAACA
TGAAAGCCATAGAGGAAGAAGAAGAAAATGATTTAGAAAACGGTCGTGAC
ACCGGCGTTAACACAACATCATCATCATCGACAACAACCACGAGCCCTTC
TTCTTCTGGACACAGAAGAAGGGACCAATTCAGGACAAGAAGAGCATACT
TCTATTGGGTTACAAGAGAGCAAGGCTCGTTCGATTGGTTTAAGGGAGTG
ATGAATGAGGTGGCTGAATTGGACCACAACAATGTCATAGAGCTTCACAA
TTACTGCACCAGTGTTTATGAAGAAGGTGATGCTCGCTCAGCTCTCATTG
CCATGCTTCAGTCCCTCAATCACGCCAAGAATGGCGTTGACGTTGTCTCT
GGAACACGCGTTAAGTCACATTTCGCCAAGCCTAATTGGCGCAATGTGTA
CAAACGCGTTGCTCTCAATCACCCTGATTCTAGAGTTGGTGTTTTCTATT
GCGGGGCACCGGCACTGACAAAAGAGCTACGACACCTAGCTTTGGATTTC
TCTCACAAGACAAGCACCAAGTTTGATTTCCATAAAGAAAACTTCTAGAT
CAAGTCCCTCCTGATTTCCACCATTATATATCATCTCTTCCACTCCGTTT
TCTCGTACAAAGCCTGTGGCATGGGCCACTGGCCCTTATGTTTATAGAAA
AATCATATCAATATTTGTTT
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