CX292548

Overview
NameCX292548
Unique NameCX292548
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length632
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292548 vs. ExPASy Swiss-Prot
Match: CVMT1_OCIBA (Chavicol O-methyltransferase OS=Ocimum basilicum GN=CVOMT1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.641e-28
Identity = 74/207 (35.75%), Postives = 110/207 (53.14%), Query Frame = 1
Query:   13 EDVLRGQAQVWQLMLAFADSMA*KSAVELRLADIMHCHGSPITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAHRSSDGSEETMYGLTQISKWLLRDSEMSLAPMILFQNSQLLQAPWHHLSQCVQEGGNA--FKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIVE 627
            E +L+ QA VW  M AFA+SM+ K A++L + DI+H H  P+TL QL   I  +        S  R+MR LV    F    S++  +E  Y LT  S+ LL+ + +++AP++          PWH++S+  +   +A  F+ A+GC  W+             +AM+C +++V   L   YK   DGIR+LVDVGGG G     IVE
Sbjct:   13 EQLLQAQAHVWNHMYAFANSMSLKCAIQLGIPDILHKHDHPMTLSQLLKAIPINKEKSQ---SFQRLMRALVNSNFFIEENSNN--QEVCYWLTPASRLLLKGAPLTVAPLVQVVLDPTFTNPWHYMSEWFKHENHATQFEAANGCTFWEKLANKPSMGRFFDEAMSCDSRLVAHVLTKDYKHVIDGIRTLVDVGGGNGTMAKAIVE 214          
BLAST of CX292548 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.814e-27
Identity = 73/206 (35.44%), Postives = 115/206 (55.83%), Query Frame = 1
Query:   10 REDVL--RGQAQVWQLMLAFADSMA*KSAVELRLADIMHCHGSPITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAHRSSDGSEETMYGLTQISKWLLRDSEMSLAPMILFQNSQLLQAPWHHLSQCVQEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEI 621
            ++DVL  + QA VW+++  FADS+  + AVEL + DI+  +  P+ L  LAS +  S  DV+   +L RI+R LV+  +    +S DG ++  Y L  I+  L R+++ S+ PMIL    +    PWH +   + + G AF+KA G  +W++            + MA   +++ S+L+S  +D F GI SLVDVGGG G  +  I
Sbjct:    6 KDDVLDIKAQAHVWKIIYGFADSLVLRCAVELGIVDIIDNNNQPMALADLASKLPVS--DVNC-DNLYRILRYLVKMEILRVEKSDDGQKK--YALEPIATLLSRNAKRSMVPMILGMTQKDFMTPWHSMKDGLSDNGTAFEKAMGMTIWEYLEGHPDQSQLFNEGMAGETRLLTSSLISGSRDMFQGIDSLVDVGGGNGTTVKAI 206          
BLAST of CX292548 vs. ExPASy Swiss-Prot
Match: EOMT1_OCIBA (Eugenol O-methyltransferase OS=Ocimum basilicum GN=EOMT1 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.095e-27
Identity = 69/207 (33.33%), Postives = 107/207 (51.69%), Query Frame = 1
Query:   13 EDVLRGQAQVWQLMLAFADSMA*KSAVELRLADIMHCHGSPITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAHRSSDGSEETMYGLTQISKWLLRDSEMSLAPMILFQNSQLLQAPWHHLSQCV--QEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIVE 627
            E +L+ Q  VW  M AFA+SM+ K A++L + DI+H HG P+TL QL   I  +           R+MR LV    F    +S+ ++E  Y LT  S  LL+++ +++ P++          PWHH+S+    ++    F+ A+GC  W+             +AM+C ++++       YK   +GIR+LVDVGGG G     IVE
Sbjct:   13 EQLLQAQVHVWNHMYAFANSMSLKCAIQLGIPDILHKHGRPMTLSQLLQSIPINKEKTQ---CFQRLMRALVNSNFFIEENNSN-NQEVCYWLTPASCLLLKEAPLTVTPLVQVVLDPTFTNPWHHMSEWFTHEKHATQFEAANGCTFWEKLANEPSKGRFFDEAMSCDSRLIAHVFTKDYKHVIEGIRTLVDVGGGNGTMAKAIVE 215          
BLAST of CX292548 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.941e-25
Identity = 73/207 (35.27%), Postives = 115/207 (55.56%), Query Frame = 1
Query:    4 DVREDVLRGQAQVWQLMLAFADSMA*KSAVELRLADIMHCHGSPITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAHRSSDGSEETMYGLTQISKWLLRDSEMSLAPMILFQNSQLLQAPWHHLSQCVQ-EGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEI 621
            +V++D L  QA++W  +  FA+S+  K AV+L LA+I+H  G+ +TL +L+S + S   +     +L R+MR LV   +F    S DG  E  YGL   +K+L++  +  +   IL    +   APWH+L   +  E G AF+KA G  +W +            +AMA  ++++MS L+    + F+GI +LVDVGGGTG  +  I
Sbjct:    2 EVKKDNLSSQAKLWNFIYGFAESLVLKCAVQLDLANIIHNSGTSMTLSELSSRLPSQPVNED---ALYRVMRYLVHMKLFTK-ASIDG--ELRYGLAPPAKYLVKGWDKCMVGSILAITDKDFMAPWHYLKDGLSGESGTAFEKALGTNIWGYMAEHPEKNQLFNEAMANDSRLIMSALVKECGNIFNGITTLVDVGGGTGTAVRNI 202          
BLAST of CX292548 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.488e-21
Identity = 66/198 (33.33%), Postives = 105/198 (53.03%), Query Frame = 1
Query:   46 QLMLAFADSMA*KSAVELRLADIMHCHGSPITLP--QLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAHRSS--DGSEETMYGLTQISKWLLRDSE-MSLAPMILFQNSQLLQAPWHHLSQCVQEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIV 624
            QL+ +    M  K+A+EL L +IM   G    LP   +AS + +  P+  ++  L RI+R+L    +         DG  E +YGL  + K+L R+ + +S++P+ L    ++L   W+HL   + EGG  F KA+G   +++            K M+  +K+ M  +L  YK GF+G+ SLVDVGGGTG  ++ IV
Sbjct:   24 QLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVM--LDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKILETYK-GFEGLASLVDVGGGTGAVVSTIV 218          
BLAST of CX292548 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.943e-21
Identity = 69/204 (33.82%), Postives = 110/204 (53.92%), Query Frame = 1
Query:   31 QAQVWQLMLAFAD--SMA*KSAVELRLADIMHCHGSPITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAHR---SSDGSEETMYGLTQISKWLLRDSE-MSLAPMILFQNSQLLQAPWHHLSQCVQEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIV 624
            +A ++ + LA A    MA KSA+EL L +IM  +GSP++  ++AS + +  P+  ++  L RI+R+L    V        S DG E  +YGL  + K+L ++ + +S+A + L    ++L   W+HL   + +GG  F KA+G   +++              M+  + I M  +L  YK GF+G+ SLVDVGGG G  L  IV
Sbjct:   18 EAALFAMQLASASVLPMALKSALELDLLEIMAKNGSPMSPTEIASKLPTKNPEAPVM--LDRILRLLTSYSVLTCSNRKLSGDGVER-IYGLGPVCKYLTKNEDGVSIAALCLMNQDKVLMESWYHLKDAILDGGIPFNKAYGMSAFEYHGTDPRFNKVFNNGMSNHSTITMKKILETYK-GFEGLTSLVDVGGGIGATLKMIV 217          
BLAST of CX292548 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.538e-21
Identity = 65/198 (32.83%), Postives = 107/198 (54.04%), Query Frame = 1
Query:   46 QLMLAFADSMA*KSAVELRLADIMHCHGSP--ITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAHRSS--DGSEETMYGLTQISKWLLRDSE-MSLAPMILFQNSQLLQAPWHHLSQCVQEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIV 624
            QL  A    M  KSA+EL L +++   G+   ++   LA+ + ++ PD H++  L RI+R+L    +      +  DG  E +YGL  + K+L ++ + +S+AP+ L    ++L   W+HLS  V +GG  F KA+G   +++            + M+  + I M  +L  Y  GFDG++++VDVGGGTG  L  IV
Sbjct:   23 QLASASVLPMVLKSAIELDLLELIKKSGAGAFVSPVDLAAQLPTTNPDAHVM--LDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETY-TGFDGLKTVVDVGGGTGATLNMIV 217          
BLAST of CX292548 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.314e-21
Identity = 69/205 (33.66%), Postives = 110/205 (53.66%), Query Frame = 1
Query:   31 QAQVWQLMLAFAD--SMA*KSAVELRLADIMHCHGSPITLP--QLASGINSSCPDVHIIPSLTRIMRMLVRKGV--FAAHRSSDGSEETMYGLTQISKWLLRDSE-MSLAPMILFQNSQLLQAPWHHLSQCVQEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIV 624
            +A ++ + LA A    M  K+A+EL L +IM   G  + L    +AS + +  PD  ++  L R++R+L    +  ++    +DG  E +YGL  + K+L ++ E +S+AP+ L    ++L   W+HL   V EGG  F KA+G   +++            + MA  + I M  +L  YK GF+G+ S+VDVGGGTG  L  IV
Sbjct:   18 EANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLPTKNPDAPVM--LDRMLRLLASYSILTYSLRTLADGKVERLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYK-GFEGLTSVVDVGGGTGAVLNMIV 219          
BLAST of CX292548 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.643e-21
Identity = 65/198 (32.83%), Postives = 104/198 (52.53%), Query Frame = 1
Query:   46 QLMLAFADSMA*KSAVELRLADIMHCHGSPITLP--QLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAHRSS--DGSEETMYGLTQISKWLLRDSE-MSLAPMILFQNSQLLQAPWHHLSQCVQEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIV 624
            QL+ +    M  K+A+EL L +IM   G    L    +AS + +  PD  ++  L RI+R+L    +         DG  E +YGL  + K+L ++ + +S++P+ L    ++L   W+HL   + EGG  F KA+G   +++            K M+  +K+ M  +L  YK GF+G+ SLVDVGGGTG  ++ IV
Sbjct:   24 QLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPDAPVM--LDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYK-GFEGLASLVDVGGGTGAVVSTIV 218          
BLAST of CX292548 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.163e-20
Identity = 65/205 (31.71%), Postives = 108/205 (52.68%), Query Frame = 1
Query:   31 QAQVWQLMLAFAD--SMA*KSAVELRLADIMHCHGSP--ITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAHRSS--DGSEETMYGLTQISKWLLRDSE-MSLAPMILFQNSQLLQAPWHHLSQCVQEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIV 624
            +A ++ + LA A    M  K+A+EL L +IM   G    ++  ++AS + +  PD  ++  L RI+R+L    +         DG  E +YGL  + K+L ++ + +S++P+ L    ++L   W++L   + EGG  F KA+G   +++            K M+  + I M  +L  YK GF+G+ SLVDVGGGTG  +  IV
Sbjct:   18 EAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVM--LDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYK-GFEGLTSLVDVGGGTGAVVNTIV 219          
The following BLAST results are available for this feature:
BLAST of CX292548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
CVMT1_OCIBA1.641e-2835.75Chavicol O-methyltransferase OS=Ocimum basilicum G... [more]
4OMT_COPJA1.814e-2735.443'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
EOMT1_OCIBA3.095e-2733.33Eugenol O-methyltransferase OS=Ocimum basilicum GN... [more]
6OMT_COPJA4.941e-2535.27(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
COMT2_POPTM1.488e-2133.33Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
OMT1_ARATH1.943e-2133.82Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_OCIBA2.538e-2132.83Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_PRUDU3.314e-2133.66Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT3_POPKI9.643e-2132.83Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_POPKI8.163e-2031.71Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]

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Properties
Property NameValue
Genbank descriptionC04016H08SK FlavFr1 Citrus clementina cDNA clone C04016H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292548 ID=CX292548; Name=CX292548; organism=Citrus clementina; type=EST; length=632bp
GCTGACGTTCGCGAGGACGTCCTAAGAGGGCAAGCCCAAGTTTGGCAACT
CATGCTCGCCTTTGCAGATTCCATGGCTTGAAAATCTGCCGTGGAGCTTC
GCTTAGCCGATATTATGCACTGCCATGGCAGCCCAATCACTTTGCCCCAG
TTAGCCTCAGGAATTAACTCATCGTGTCCAGATGTTCACATAATTCCCTC
CCTTACGCGCATCATGAGAATGCTTGTCCGGAAAGGAGTTTTCGCCGCAC
ATCGTTCATCAGACGGCAGTGAAGAGACGATGTACGGATTGACGCAAATA
TCAAAATGGTTACTACGTGACTCCGAGATGAGTCTTGCTCCGATGATACT
TTTCCAAAACAGTCAACTGCTACAGGCACCGTGGCATCACCTTAGCCAAT
GTGTCCAAGAAGGTGGTAATGCTTTCAAGAAGGCTCACGGCTGTGAAATG
TGGGATTTCGCTTCACAAAACTCTCAATTCAACAACTCGTTCAATAAGGC
CATGGCATGCACGGCAAAGATTGTGATGAGCACACTCCTCTCACACTATA
AAGACGGGTTTGATGGCATACGATCACTGGTCGACGTGGGTGGTGGCACT
GGCGAAGAGCTTGCCGAGATTGTCGAATTCTA
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