CX292550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292550 vs. ExPASy Swiss-Prot
Match: SKP1B_ARATH (SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.199e-59 Identity = 116/153 (75.82%), Postives = 127/153 (83.01%), Query Frame = 1 Query: 169 MSTSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDR-------------ATSGVYDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKND 588 MST +KITLKSSDGE FE+DEAVALESQTIKHMIEDDC DNGIPLPNVTSKILSKVIEYCK+HVEA++ + A+ +DLK WD++F+KVDQ TLFDLILAANYLNIK LLDLTCQTVADMIKGKTPEEIRKTFNIKND Sbjct: 1 MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYCKRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKND 153
BLAST of CX292550 vs. ExPASy Swiss-Prot
Match: SKP1A_ARATH (SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 3.488e-59 Identity = 112/141 (79.43%), Postives = 125/141 (88.65%), Query Frame = 1 Query: 175 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVY---DDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKND 588 ++KKI LKSSDGE+FEV+EAVALESQTI HM+EDDC DNG+PLPNVTSKIL+KVIEYCK+HVEA+ S A G DDLKAWD DF+K+DQATLF+LILAANYLNIK+LLDLTCQTVADMIKGKTPEEIR TFNIKND Sbjct: 2 SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKND 142
BLAST of CX292550 vs. ExPASy Swiss-Prot
Match: ASK4_ARATH (SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 4.566e-51 Identity = 101/142 (71.13%), Postives = 116/142 (81.69%), Query Frame = 1 Query: 175 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASK----SDDRATSGVYDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKND 588 T K I LKSSDGE+FE++EAVA++SQTIKHMIEDDCADNGIPLPNVT IL+KVIEYCKKHVEA+ D S D+LK WD++FVKVDQ TLFDLILAANYLNI LLDLTC+ VAD ++GKTPE++R FNIKND Sbjct: 4 TKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKKHVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKAVADQMRGKTPEQMRAHFNIKND 145
BLAST of CX292550 vs. ExPASy Swiss-Prot
Match: ASK3_ARATH (SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 5.582e-49 Identity = 98/142 (69.01%), Postives = 111/142 (78.17%), Query Frame = 1 Query: 175 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASK----SDDRATSGVYDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKND 588 T K I LKSSDGE+FEV+EAVA+ESQTIKHMIEDDC DNGIPLPNVT IL+KVIEYCKKHVEA+ D S +LK WD DFVKVD TLFDL+ AANYLNI LLDLTC+ VAD ++GKTP ++R+ FNIKND Sbjct: 4 TKKMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKKHVEAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKAVADQMRGKTPAQMREHFNIKND 145
BLAST of CX292550 vs. ExPASy Swiss-Prot
Match: ASK11_ARATH (SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 1.985e-46 Identity = 94/138 (68.12%), Postives = 110/138 (79.71%), Query Frame = 1 Query: 175 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVYDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKND 588 +SK I L SSDG++FEV+EAVA++SQTI HM+EDDC +GIPL NV SKIL KVIEYCKKH D A +DL WD F+ ++Q+T+F+LILAANYLNIKSLLDLTCQTVADMIKGKTPEEIR TFNI+ND Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKH-----HVDEANPISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRSTFNIEND 134
BLAST of CX292550 vs. ExPASy Swiss-Prot
Match: ASK12_ARATH (SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.681e-45 Identity = 94/139 (67.63%), Postives = 110/139 (79.14%), Query Frame = 1 Query: 175 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKK-HVEASKSDDRATSGVYDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKND 588 +SK I L SSDG++FEV+EAVA++SQTI HM+EDDC +GIPL NV SKIL KVIEYCKK HV D A +DL WD F+ ++Q+T+F+LILAANYLNIKSL DLTCQTVADMIKGKTPEEIR TFNI+ND Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKYHV------DEANPISEEDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIKGKTPEEIRSTFNIEND 134
BLAST of CX292550 vs. ExPASy Swiss-Prot
Match: ASK13_ARATH (SKP1-like protein 13 OS=Arabidopsis thaliana GN=ASK13 PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.127e-41 Identity = 87/139 (62.59%), Postives = 104/139 (74.82%), Query Frame = 1 Query: 178 SKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVYDDLKAWDTDFVKV--DQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKND 588 SK + L SSDGE+F+V+EAVA++SQTI HMIEDDC NG+P+ NVT ILSKVIEYCKKHV + D T D+LK WD +F+K +TLFD++LAANYLNIK LLDL CQTVADMI GK P+EIR I+ND Sbjct: 2 SKMVMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKKHVVS----DSPTEESKDELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQTVADMITGKKPDEIRALLGIEND 136
BLAST of CX292550 vs. ExPASy Swiss-Prot
Match: ASK10_ARATH (SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.472e-41 Identity = 87/138 (63.04%), Postives = 100/138 (72.46%), Query Frame = 1 Query: 175 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVYDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKND 588 ++KKI LKSSDG +FEV+E A + QTI HM EDDC DNGIPLP VT KIL VIEYC KH D A +DLK WD +F++ Q+T+FDLI+AANYLNIKSLLDL CQTVADMIK T E RK FNI+ND Sbjct: 2 STKKIILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCNKH-----HVDAANPCSDEDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVADMIKDNTVEHTRKFFNIEND 134
BLAST of CX292550 vs. ExPASy Swiss-Prot
Match: ASK9_ARATH (SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK9 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 9.543e-41 Identity = 86/139 (61.87%), Postives = 103/139 (74.10%), Query Frame = 1 Query: 175 TSKKITLKSSDGEAFEVDEAVALESQTI-KHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVYDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKND 588 ++KKI LKSSDG +FEV+E A + Q I HM E+DC DNGIPLPNVT KIL+ VIEYC KH D A DDLK WD +F++ D +T+FDLI AANYLNIKSL DL CQTVA++IKG TPE+IR+ FNI+ND Sbjct: 2 STKKIILKSSDGHSFEVEEEAARQCQIIIAHMSENDCTDNGIPLPNVTGKILAMVIEYCNKH-----HVDAANPCSDDDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVAEIIKGNTPEQIREFFNIEND 135
BLAST of CX292550 vs. ExPASy Swiss-Prot
Match: ASK14_ARATH (SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.070e-39 Identity = 84/139 (60.43%), Postives = 102/139 (73.38%), Query Frame = 1 Query: 175 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVYDDLKAWDTDFV-KVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKND 588 +S KI L SSDGE+FEV+EAVA + + ++HMIEDDC +PL NVT KILS V+EYCKKHV +S D+ K WD +F+ K DQ T+F L+LAANYLNIK LLDL+ QTVAD IK KTPEEIR+ FNI+ND Sbjct: 2 SSNKIVLSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCKKHVVDEES---------DEFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKDKTPEEIREIFNIEND 131 The following BLAST results are available for this feature:
BLAST of CX292550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX292550 ID=CX292550; Name=CX292550; organism=Citrus clementina; type=EST; length=588bpback to top |