CX292552
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292552 vs. ExPASy Swiss-Prot
Match: MTHR_ORYSJ (Probable methylenetetrahydrofolate reductase OS=Oryza sativa subsp. japonica GN=Os03g0815200 PE=2 SV=1) HSP 1 Score: 382.874 bits (982), Expect = 8.250e-106 Identity = 179/222 (80.63%), Postives = 197/222 (88.74%), Query Frame = 3 Query: 3 IEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKVLPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKE 668 IEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSY+SRT+GWDQYP GRWGDSRNPSYGAL+D+QF RPR R KKL EEWAVP+KSVEDI E+F N+C GKL SSPWSELDGLQPETKII++QL KIN KGFLTINSQPAVNGERSDS+SVGWGGPGGYVYQKAYLEFFCS EKL L++KSK P +T++AVNK+G +N+ VNAVTWGVFP KE Sbjct: 303 IEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYISRTLGWDQYPHGRWGDSRNPSYGALTDYQFTRPRGRGKKLQEEWAVPVKSVEDINERFMNFCQGKLTSSPWSELDGLQPETKIIDDQLVKINQKGFLTINSQPAVNGERSDSTSVGWGGPGGYVYQKAYLEFFCSKEKLDQLIEKSKAFPSLTYIAVNKDGESFSNIPTNAVNAVTWGVFPGKE 524
BLAST of CX292552 vs. ExPASy Swiss-Prot
Match: MTHR1_MAIZE (Methylenetetrahydrofolate reductase 1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 373.244 bits (957), Expect = 6.537e-103 Identity = 173/222 (77.93%), Postives = 192/222 (86.49%), Query Frame = 3 Query: 3 IEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKVLPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKE 668 IEESK+SR LPWRP TNVFRVKEDVRPIFWANRPKSYL RT+GWDQYP GRWGDSRNPSYGAL+DHQF RPR R KKL EEWAVPLKSVEDI E+F N+C GKL SSPWSELDGLQPETKII++QL IN KGFLTINSQPAVNGE+SDS +VGWGGPGGYVYQKAYLEFFC+ EKL L++K K P +T++AVNK+G +N++ VNAVTWGVFP KE Sbjct: 303 IEESKVSRPLPWRPATNVFRVKEDVRPIFWANRPKSYLKRTLGWDQYPHGRWGDSRNPSYGALTDHQFTRPRGRGKKLQEEWAVPLKSVEDISERFTNFCQGKLTSSPWSELDGLQPETKIIDDQLVNINQKGFLTINSQPAVNGEKSDSPTVGWGGPGGYVYQKAYLEFFCAKEKLDQLIEKIKAFPSLTYIAVNKDGETFSNISPNAVNAVTWGVFPGKE 524
BLAST of CX292552 vs. ExPASy Swiss-Prot
Match: MTHR2_ARATH (Methylenetetrahydrofolate reductase 2 OS=Arabidopsis thaliana GN=MTHFR2 PE=1 SV=2) HSP 1 Score: 372.859 bits (956), Expect = 8.537e-103 Identity = 175/222 (78.83%), Postives = 192/222 (86.49%), Query Frame = 3 Query: 3 IEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKVLPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKE 668 I+ESKISRSLPWR P NVFR KEDVRPIFWANRPKSY+SRT GW+ +P+GRWGDSR+ SYGALSDHQF RPR+RDKKL +EW VPLKSVEDI EKFK CLG L+SSPWSELDGLQPET+IINEQL K+N KGFLTINSQP+VN ERSDS +VGWGGP GYVYQKAYLEFFCS EKL A+V+K K LP IT+MAVNK W +N Q DVNAVTWGVFPAKE Sbjct: 303 IDESKISRSLPWRRPANVFRTKEDVRPIFWANRPKSYISRTKGWEDFPQGRWGDSRSASYGALSDHQFSRPRARDKKLQQEWVVPLKSVEDIQEKFKELCLGNLKSSPWSELDGLQPETRIINEQLIKVNSKGFLTINSQPSVNAERSDSPTVGWGGPVGYVYQKAYLEFFCSKEKLDAVVEKCKALPSITYMAVNKGEQWVSNTAQADVNAVTWGVFPAKE 524
BLAST of CX292552 vs. ExPASy Swiss-Prot
Match: MTHR1_ARATH (Methylenetetrahydrofolate reductase 1 OS=Arabidopsis thaliana GN=MTHFR1 PE=1 SV=1) HSP 1 Score: 364.77 bits (935), Expect = 2.325e-100 Identity = 165/222 (74.32%), Postives = 188/222 (84.68%), Query Frame = 3 Query: 3 IEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKVLPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKE 668 I+ESKISRSLPWR P NVFR KEDVRPIFWANRPKSY+SRT GW+ +P GRWGDS + +Y LSD+QF RP+ RDKKL +EW VPLKS+ED+ EKFK C+G L+SSPWSELDGLQPETKIINEQLGKIN GFLTINSQP+VN +SDS ++GWGGPGGYVYQKAYLEFFCS +KL LV+KSK P IT+MAVNK NW +N ++DVNAVTWGVFPAKE Sbjct: 303 IDESKISRSLPWRRPANVFRTKEDVRPIFWANRPKSYISRTKGWNDFPHGRWGDSHSAAYSTLSDYQFARPKGRDKKLQQEWVVPLKSIEDVQEKFKELCIGNLKSSPWSELDGLQPETKIINEQLGKINSNGFLTINSQPSVNAAKSDSPAIGWGGPGGYVYQKAYLEFFCSKDKLDTLVEKSKAFPSITYMAVNKSENWVSNTGESDVNAVTWGVFPAKE 524
BLAST of CX292552 vs. ExPASy Swiss-Prot
Match: MTHR_HUMAN (Methylenetetrahydrofolate reductase OS=Homo sapiens GN=MTHFR PE=1 SV=3) HSP 1 Score: 186.808 bits (473), Expect = 8.677e-47 Identity = 97/225 (43.11%), Postives = 137/225 (60.89%), Query Frame = 3 Query: 24 RSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQ--FMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLG-------KLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKVLPF-ITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKE 668 R LPW + R +EDVRPIFWA+RPKSY+ RT WD++P GRWG+S +P++G L D+ +++ +S ++L + W L S E ++E F Y G K+ PW++ + L ET ++ E+L ++N +G LTINSQP +NG+ S VGWG GGYV+QKAYLEFF S E AL+ K + + VN +G N + NAVTWG+FP +E Sbjct: 345 RPLPWALSAHPKRREEDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPKEELLKMWGEELTSEESVFEVFVLYLSGEPNRNGHKVTCLPWND-EPLAAETSLLKEELLRVNRQGILTINSQPNINGKPSSDPIVGWGPSGGYVFQKAYLEFFTSRETAEALLQVLKKYELRVNYHLVNVKGENITNAPELQPNAVTWGIFPGRE 568
BLAST of CX292552 vs. ExPASy Swiss-Prot
Match: MTHR_MACFA (Methylenetetrahydrofolate reductase OS=Macaca fascicularis GN=MTHFR PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.525e-46 Identity = 97/225 (43.11%), Postives = 136/225 (60.44%), Query Frame = 3 Query: 24 RSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQ--FMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLG-------KLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKVLPF-ITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKE 668 R LPW + R +EDVRPIFWA+RPKSY+ RT WD++P GRWG+S +P++G L D+ +++ +S + L + W L S E ++E F Y G K+ PW++ + L ET ++ E+L ++N +G LTINSQP +NG+ S VGWG GGYV+QKAYLEFF S E AL+ K + + VN +G N + NAVTWG+FP +E Sbjct: 345 RPLPWALSAHPKRREEDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPRELLLKMWGEELTSEESVFEVFVLYLSGEPNRNGHKVTCLPWND-EPLAAETSLLKEELLRVNRQGILTINSQPNINGKPSSDPVVGWGPSGGYVFQKAYLEFFTSRETAEALLQVLKKYELRVNYHLVNVKGENITNAPELQPNAVTWGIFPGRE 568
BLAST of CX292552 vs. ExPASy Swiss-Prot
Match: MTHR_MOUSE (Methylenetetrahydrofolate reductase OS=Mus musculus GN=Mthfr PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 5.624e-46 Identity = 94/225 (41.78%), Postives = 138/225 (61.33%), Query Frame = 3 Query: 24 RSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQ--FMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLG-------KLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKVLPF-ITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKE 668 R LPW + R +EDVRPIFWA+RPKSY+ RT WD++P GRWG+S +P++G L D+ +++ +S ++L + W L S E ++E F++Y G ++ PW++ + L ET ++ E+L ++N G LTINSQP +N + S VGWG GGYV+QKAYLEFF S E + AL+ K + + V+ +G N + NAVTWG+FP +E Sbjct: 344 RPLPWALSAHPKRREEDVRPIFWASRPKSYIYRTQDWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPREELLKMWGEELTSEESVFEVFEHYLSGEPNRHGYRVTCLPWND-EPLAAETSLMKEELLRVNRLGILTINSQPNINAKPSSDPVVGWGPSGGYVFQKAYLEFFTSRETVEALLQVLKTYELRVNYHIVDVKGENITNAPELQPNAVTWGIFPGRE 567
BLAST of CX292552 vs. ExPASy Swiss-Prot
Match: MTHR_BOVIN (Methylenetetrahydrofolate reductase OS=Bos taurus GN=MTHFR PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 9.593e-46 Identity = 94/225 (41.78%), Postives = 138/225 (61.33%), Query Frame = 3 Query: 24 RSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQ--FMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLG-------KLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKVLPF-ITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKE 668 R LPW + R EDVRPIFWA+RPKSY+ RT WD++P GRWG+S +P++G L D+ +++ +S ++L + W L S E +++ F ++ G K+ PW++ + L ET ++ E+L ++N +G LTINSQP +NG+ S VGWG GGYV+QKAYLEFF S E + AL+ K + + V+ +G N + NAVTWG+FP +E Sbjct: 344 RPLPWALSAHPKRRVEDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPKEELLKMWGEELTSEESVFQVFAHHLSGEPNQNGYKVTCLPWND-EPLAAETSLMKEELLRVNRRGILTINSQPNINGKPSSDPIVGWGPSGGYVFQKAYLEFFTSRETVEALLQVLKKYELRVNYHIVDVKGENITNAPELQPNAVTWGIFPGRE 567
BLAST of CX292552 vs. ExPASy Swiss-Prot
Match: MTHR1_SCHPO (Methylenetetrahydrofolate reductase 1 OS=Schizosaccharomyces pombe GN=met9 PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 8.121e-45 Identity = 92/203 (45.32%), Postives = 121/203 (59.61%), Query Frame = 3 Query: 60 RVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKVLPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKE 668 R+ E VRPIFW R +SY+SRT WD+ P GRWGDSR+P++G ++ R K++ W P KS +I + F YC K+ S PWS+L + E +I +QL +N FLTINSQPA+NGE+S GWG P GYV+QK Y+EFF P L L + K L +++ NK G+ N NAVTWGVFP +E Sbjct: 318 RINEGVRPIFWRTRNESYVSRTDQWDELPHGRWGDSRSPAFGEFDAIRYGL-RMSPKEITTSWGSP-KSYSEIGDLFARYCEKKISSLPWSDLP-ISDEADLIRDQLLSMNRNAFLTINSQPALNGEKSSHPVFGWGPPNGYVFQKPYVEFFVHPSLLNELKETVKKLNSVSYFVTNKNGDLDTNSQYEIPNAVTWGVFPNRE 517
BLAST of CX292552 vs. ExPASy Swiss-Prot
Match: MTHR_CAEEL (Probable methylenetetrahydrofolate reductase OS=Caenorhabditis elegans GN=C06A8.1 PE=1 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 1.434e-41 Identity = 96/231 (41.56%), Postives = 137/231 (59.31%), Query Frame = 3 Query: 24 RSLPWRPPT-NVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMR---PRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLG-------KLRSSPWSELD-GLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPE---KLTALVDKSKVLPFITFMAVNKEGNW-KANVNQTDVNAVTWGVFPAKE 668 R PW+ + + R E VRPI+W+ RP+SY++RT WDQ+P GRWG+S +P++G +S + R+ D +L + ++S ED+ F NY K+ PW+E + G+QPET +I+EQL N G LT+NSQP+VNG S VGWG PGGY YQKAYLE F + E KL ++++ + + + A+NK+ + K N +T AVTWGVFP E Sbjct: 358 RVFPWKNRSQHPIRCLESVRPIYWSFRPRSYITRTRDWDQFPNGRWGNSSSPAFGDVSSYYLSNLTTVRNADDRL-AMFGANIESFEDVKRVFINYITQAPNADGVKVTVLPWTEAETGVQPETSLISEQLVWCNENGILTVNSQPSVNGAPSTDPLVGWGKPGGYCYQKAYLECFMTAELSDKLIQIIEREFPVR-VNYHAINKDSTFDKTNSEETTPIAVTWGVFPGSE 586 The following BLAST results are available for this feature:
BLAST of CX292552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX292552 ID=CX292552; Name=CX292552; organism=Citrus clementina; type=EST; length=668bpback to top |