CX292566
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292566 vs. ExPASy Swiss-Prot
Match: KEULE_ARATH (SNARE-interacting protein KEULE OS=Arabidopsis thaliana GN=KEU PE=1 SV=2) HSP 1 Score: 338.576 bits (867), Expect = 1.948e-92 Identity = 168/229 (73.36%), Postives = 198/229 (86.46%), Query Frame = 3 Query: 18 KNNRIIRETGLRELGQLEQDIVFGDAGFKDVIKFLTAKEDITRENKLRLLMIVASIYPEKFEGEKGLNLMKLAKLTADDMTAVNNMRLLGGALESKKSTIGAFSLKFDIHKKKRAARKDRSGGEETWQLSRFYPMIEELVEKLGKNELSKDDYPCMNDPSPTFHGTT---PSALTNEVPAAHSMRSRRTPTWARPRSSDDGYSSDSVLKHASSDFKKMGQRIFVFIGGG 695 K N +IRE GLRELGQLEQD+VFGDAG KDVIK+L+ +E+ +RE KLRLLMI+A+IYPEKFEGEKG NLMKLAKL++DDMTAVNNM LLG A+++KK+T G F+LKFD+HKKKRA RK+R E WQLSRFYPMIEEL+EKL K EL K+D+PCMNDPSP+FHG+T +A +++ AA SMRSRRTPTWA+PR SDDGYSSDSVL+HASSDF+KMGQRIFVFI GG Sbjct: 386 KLNDLIREQGLRELGQLEQDLVFGDAGMKDVIKYLSTQEEASREGKLRLLMILATIYPEKFEGEKGQNLMKLAKLSSDDMTAVNNMSLLGSAVDAKKNTPGGFTLKFDLHKKKRAVRKERQ-EEAAWQLSRFYPMIEELIEKLSKGELPKEDFPCMNDPSPSFHGSTSLSSAASSSQGQAAQSMRSRRTPTWAKPRGSDDGYSSDSVLRHASSDFRKMGQRIFVFIVGG 613
BLAST of CX292566 vs. ExPASy Swiss-Prot
Match: SEC1A_ARATH (Protein transport Sec1a OS=Arabidopsis thaliana GN=SEC1A PE=2 SV=3) HSP 1 Score: 286.96 bits (733), Expect = 6.726e-77 Identity = 150/237 (63.29%), Postives = 178/237 (75.11%), Query Frame = 3 Query: 15 GKNNRIIRETGLRELGQLEQDIVFGDAGFKDVIKFLTAKEDITRENKLRLLMIVASIYPEKFEGEKGLNLMKLAKLTADDMTAVNNMRLLGGALESKKSTIGAFSLKFDIHKKKRAARKDRSGGEETWQLSRFYPMIEELVEKLGKNELSKDDYPCMNDPS----------PTFHGTTPSALTNEVPAAHSMRSRRTPTWARPRSSDDGYSSDSVLKHASSDFKKMGQRIFVFIGGG 695 GK NRIIR+TGLR+LGQLEQD+VFGDAG KDVI FL +D ENKLRLLMI A++YPEKFEG+KG+ LM+LA+L+ DM ++NM+L+ G+ E+K + G+FSLKFD K K+A RKDRSG EETWQL RFYPMIEEL+EKL K +LSK DY CMN S + P+A+ HSMRSRRT TWARP SSDDGYSSDSVLK AS++FKK+GQRIFVFI GG Sbjct: 380 GKINRIIRDTGLRDLGQLEQDLVFGDAGAKDVINFLRTNQDTNPENKLRLLMIYATVYPEKFEGDKGVKLMQLARLSPVDMKVISNMQLIAGSPENKAKS-GSFSLKFDAGKTKQANRKDRSGEEETWQLFRFYPMIEELLEKLVKGDLSKSDYLCMNQSSHKEESEARTGSVRKSSAPTAVPERKATPHSMRSRRTATWARPHSSDDGYSSDSVLKSASTEFKKLGQRIFVFIIGG 615
BLAST of CX292566 vs. ExPASy Swiss-Prot
Match: SEC1B_ARATH (Protein transport Sec1b OS=Arabidopsis thaliana GN=SEC1B PE=2 SV=2) HSP 1 Score: 282.722 bits (722), Expect = 1.268e-75 Identity = 148/225 (65.78%), Postives = 171/225 (76.00%), Query Frame = 3 Query: 24 NRIIRETGLRELGQLEQDIVFGDAGFKDVIKFLTAKEDITRENKLRLLMIVASIYPEKFEGEKGLNLMKLAKLTADDMTAVNNMRLLGGA-LESKKSTIGAFSLKFDIHKKKRAARKDRSGGEETWQLSRFYPMIEELVEKLGKNELSKDDYPCMNDPSPTFHGTTPSALTNEVPAAHSMRSRRTPTWARPRSSDDGYSSDSVLKHASSDFKKMGQRIFVFIGGG 695 NR I E GLR+LGQLEQD+VFGDAG KDVIKFL+ I+ E+KLRL+MIVA+IYP+KFEGEKG +M+LAKL+ DD+ AVNNMRLLG E KKST G+F LKFD+ K KRAAR+DR G +TWQLSRFYP++EELVEKL K L K DYPCMN+P PTF+ + S + V SRRTPTWAR SDDGY SDSVL ASS FK+ GQRIFVFI GG Sbjct: 389 NRTIMEQGLRDLGQLEQDLVFGDAGRKDVIKFLSTNHIISHESKLRLIMIVAAIYPKKFEGEKGRKMMELAKLSGDDVVAVNNMRLLGPVHTECKKSTTGSFPLKFDVLKTKRAARRDRVGETQTWQLSRFYPIVEELVEKLSKGHLPKQDYPCMNEPKPTFYSGSLSPSASPV----LPHSRRTPTWARRHLSDDGYFSDSVLGRASSGFKRKGQRIFVFIVGG 609
BLAST of CX292566 vs. ExPASy Swiss-Prot
Match: SEC1A_ORYSJ (Probable protein transport Sec1a OS=Oryza sativa subsp. japonica GN=Os04g0252400 PE=3 SV=2) HSP 1 Score: 266.544 bits (680), Expect = 9.407e-71 Identity = 141/231 (61.04%), Postives = 173/231 (74.89%), Query Frame = 3 Query: 15 GKNNRIIRETGLRELGQLEQDIVFGDAGFKDVIKFLTAKEDITRENKLRLLMIVASIYPEKFEGEKGLNLMKLAKLTADDMTAVNNMRLLGGALESKKSTIGAFSLKFDIHKKKRAARKDRSGGEETWQLSRFYPMIEELVEKLGKNELSKDDYPCMNDPSPTFHGTTPSALTNEVPA---AHSMRSRRT-PTWARPRSSDDGYSSDSVLKHASSDFKKMGQRIFVFIGGG 695 GK N I+E L+++GQLEQD+VFGDAG K++I F DI+RENKLRLLM+ A+I P+K +KG LM+LA L+ADDM AV+NMR L G +SKKS+ G F+LKFD+ KK+ RK+R G E W LSRFYP++EEL+EKL K EL KD+Y +NDPSP+F G PSA T PA A SMRSRRT TWARPR SDDGYSSDSVLKH SS+ +K+GQR+FVF+ GG Sbjct: 385 GKLNSTIKEQQLKDVGQLEQDLVFGDAGTKELINFFRTHLDISRENKLRLLMVYAAINPDKTRSDKGAKLMQLAGLSADDMIAVSNMRCLCGH-DSKKSSAGGFTLKFDLRKKRHGIRKERIGEESKWMLSRFYPILEELIEKLSKGELPKDEYHYLNDPSPSFRG-IPSASTQTSPAHQPAQSMRSRRTGGTWARPRDSDDGYSSDSVLKHTSSNSRKLGQRLFVFVIGG 613
BLAST of CX292566 vs. ExPASy Swiss-Prot
Match: SEC1B_ORYSJ (Probable protein transport Sec1b OS=Oryza sativa subsp. japonica GN=Os06g0135900 PE=2 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 3.952e-69 Identity = 134/230 (58.26%), Postives = 171/230 (74.35%), Query Frame = 3 Query: 15 GKNNRIIRETGLRELGQLEQDIVFGDAGFKDVIKFLTAKEDITRENKLRLLMIVASIYPEKFEGEKGLNLMKLAKLTADDMTAVNNMRLLGGALESKKSTIGAFSLKFDIHKKKRAARKDRSGGEETWQLSRFYPMIEELVEKLGKNELSKDDYPCMNDPSPTFHGTTPSALTNEVPAAHSM--RSRRTPTWARPRSSDDGYSSD-SVLKHASSDFKKMGQRIFVFIGGG 695 GK N+ IRE GLR++GQ+EQD+VFGDA K+VI L +K+D++ ENKLRLL+I A +YPEKFEG+KG LM+LAKL D+M A+N++R L G+ K S G FSLKFD KKK AAR +R G+ETW LSRF+P+IEEL+EKL K L ++YP M++PS T G+T SA + A M RSRRTPTWA+ R+SDD SSD SVL+H S+DFK++G RIFVF+ GG Sbjct: 382 GKINKFIREYGLRDIGQVEQDLVFGDAAAKEVISILRSKQDMSPENKLRLLIIYAIVYPEKFEGDKGEKLMQLAKLPHDEMDAINSLRYLVGSDTKKASRPGGFSLKFDAQKKKNAARTERQDGDETWALSRFFPLIEELIEKLSKGALPLNEYPSMSEPSSTEQGSTQSAAATKPAQAQPMSRRSRRTPTWAKSRNSDDSQSSDSSVLRHGSNDFKRLGNRIFVFMIGG 611 The following BLAST results are available for this feature:
BLAST of CX292566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX292566 ID=CX292566; Name=CX292566; organism=Citrus clementina; type=EST; length=698bpback to top |