CX292750

Overview
NameCX292750
Unique NameCX292750
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292750 vs. ExPASy Swiss-Prot
Match: IFRH_SOLTU (Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 324.709 bits (831), Expect = 3.009e-88
Identity = 159/227 (70.04%), Postives = 192/227 (84.58%), Query Frame = 2
Query:    2 TVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGIDDDRIHGAVEPAKSTYDVKAKIRRAVEAEGIPYTYVASYGLNGHFLPNLSQPEATAPPRDKVVILGDGNPKAVYNKEDDVATFTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSMWERKIGKTLEREYVSEEQLLKNIQEAAPPLGRLLSIYHSAFVEGVQTDFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 682
            TVGH L+ADQVK+IAAIKEAGNVKRFFPSEFG D DR+H AVEPAK+ ++ KA+IRR VEAEGIP+TYVA++   G+ LPNL+QP A  PP DKVVILG GN KAV+NKE+D+ T+TI AVDDP+TLNK LYI+PP NI + N+LVS+WE+K GK LER YV EEQ+LKNIQEA+ P+   LSIYH+AFV+G  T+F+IEPSFGVEAS++YPDVKYT +DE LNQ+V
Sbjct:   83 TVGHALLADQVKLIAAIKEAGNVKRFFPSEFGNDVDRVH-AVEPAKAAFNTKAQIRRVVEAEGIPFTYVATFFFAGYSLPNLAQPGAAGPPNDKVVILGHGNTKAVFNKEEDIGTYTINAVDDPKTLNKILYIKPPHNIITLNELVSLWEKKTGKNLERLYVPEEQVLKNIQEASVPMNVGLSIYHTAFVKGDHTNFEIEPSFGVEASEVYPDVKYTPIDEILNQYV 308          
BLAST of CX292750 vs. ExPASy Swiss-Prot
Match: IFRH_ARATH (Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 4.506e-76
Identity = 146/228 (64.04%), Postives = 177/228 (77.63%), Query Frame = 2
Query:    2 TVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGIDDDRIHGAVEPAKSTYDVKAKIRRAVEAEGIPYTYVASYGLNGHFLPNLSQ--PEATAPPRDKVVILGDGNPKAVYNKEDDVATFTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSMWERKIGKTLEREYVSEEQLLKNIQEAAPPLGRLLSIYHSAFVEGVQTDFKIEPSFGVEASQLYPDVKYTTVDEYLNQF 679
            TVG   I DQ KII+AIKEAGNVKRF PSEFG+D DR   AVEPAKS +  K +IRR +EAEGIPYTY  +    G++LP L Q  P  T+PPRDKV ILGDGN KAV NKE+D+A +TIKAVDDPRTLNK LYI+P  N  S N++V++WE+KIGK+LE+ ++ EEQLLK+IQE+  P+  +LSI H+ FV G  T+  IEPSFGVEAS+LYPDVKYT+VDEYL+ F
Sbjct:   84 TVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVDVDRT-SAVEPAKSAFAGKIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQFEPGLTSPPRDKVTILGDGNAKAVINKEEDIAAYTIKAVDDPRTLNKILYIKPSNNTLSMNEIVTLWEKKIGKSLEKTHLPEEQLLKSIQESPIPINVVLSINHAVFVNG-DTNISIEPSFGVEASELYPDVKYTSVDEYLSYF 309          
BLAST of CX292750 vs. ExPASy Swiss-Prot
Match: IFRH_TOBAC (Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.236e-75
Identity = 140/227 (61.67%), Postives = 171/227 (75.33%), Query Frame = 2
Query:    2 TVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGIDDDRIHGAVEPAKSTYDVKAKIRRAVEAEGIPYTYVASYGLNGHFLPNLSQPEATAPPRDKVVILGDGNPKAVYNKEDDVATFTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSMWERKIGKTLEREYVSEEQLLKNIQEAAPPLGRLLSIYHSAFVEGVQTDFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 682
            TVG     DQV II AIKEAGN+KRF PSEFG D D    A+EPA S + +K +IRR +EAEGIPYTYV        FLPNL Q EA  PPRDKVVI GDGNPKA+Y KE+D+AT+TI+AVDDPRTLNK L+++PP NI SFN++VS+WE KIGKTLE+ Y+SEE +L+ +QE   PL   L+I HS FV G   +F+++P  GVEA++LYP VKYTTVDE+ N+FV
Sbjct:   85 TVGGQQFTDQVNIIKAIKEAGNIKRFLPSEFGFDVDHAR-AIEPAASLFALKVRIRRMIEAEGIPYTYVICNWFADFFLPNLGQLEAKTPPRDKVVIFGDGNPKAIYVKEEDIATYTIEAVDDPRTLNKTLHMRPPANILSFNEIVSLWEDKIGKTLEKLYLSEEDILQIVQEGPLPLRTNLAICHSVFVNGDSANFEVQPPTGVEATELYPKVKYTTVDEFYNKFV 310          
BLAST of CX292750 vs. ExPASy Swiss-Prot
Match: IFR_MEDSA (Isoflavone reductase OS=Medicago sativa GN=IFR PE=1 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.500e-71
Identity = 133/225 (59.11%), Postives = 172/225 (76.44%), Query Frame = 2
Query:    8 GHTLIADQVKIIAAIKEAGNVKRFFPSEFGIDDDRIHGAVEPAKSTYDVKAKIRRAVEAEGIPYTYVASYGLNGHFLPNLSQPEATAPPRDKVVILGDGNPKAVYNKEDDVATFTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSMWERKIGKTLEREYVSEEQLLKNIQEAAPPLGRLLSIYHSAFVEGVQTDFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 682
            G  LI DQVKII AIKEAGNVK+FFPSEFG+D DR H AVEP +  ++ KA IRR +EAEG+PYTY+  +   G+FL NL+Q + T PPRDKVVILGDGN K  Y  E DV TFTI+A +DP TLNK ++I+ P N  + N+++++WE+KIGKTLE+ YVSEEQ+LK+IQE++ P   LL++YHS  ++G    ++I+P+  +EAS+ YPDV YTT DEYLNQFV
Sbjct:   96 GRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDR-HEAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDTTDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPENYLTQNEVIALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKG-DAVYEIDPAKDIEASEAYPDVTYTTADEYLNQFV 318          
BLAST of CX292750 vs. ExPASy Swiss-Prot
Match: IFR_CICAR (Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.342e-71
Identity = 134/227 (59.03%), Postives = 171/227 (75.33%), Query Frame = 2
Query:    2 TVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGIDDDRIHGAVEPAKSTYDVKAKIRRAVEAEGIPYTYVASYGLNGHFLPNLSQPEATAPPRDKVVILGDGNPKAVYNKEDDVATFTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSMWERKIGKTLEREYVSEEQLLKNIQEAAPPLGRLLSIYHSAFVEGVQTDFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 682
            T G  LI DQVKII AIKEAGNVKRFFPSEFG+D DR H AV+P +  +D KA IRR VEAEG+PYTY+  +   G+FL NL+Q +AT PPRDKV+ILGDGN K  Y  E DV T+TI+A +DPRTLNK ++I+ P N  + N++VS+WE+KIGKTLE+ Y+SEE++LK+I  +  P   LL++YHS  ++G    ++I+P+   EA  LYPDVKYTT DEYL+QFV
Sbjct:   94 TFGRLLILDQVKIIKAIKEAGNVKRFFPSEFGLDVDR-HDAVDPVRPVFDEKASIRRVVEAEGVPYTYLCCHAFTGYFLRNLAQFDATEPPRDKVIILGDGNVKGAYVTEADVGTYTIRAANDPRTLNKAVHIRLPHNYLTSNEVVSLWEKKIGKTLEKSYISEEKVLKDINVSTFPHNYLLALYHSQQIKG-DAVYEIDPAKDAEAYDLYPDVKYTTADEYLDQFV 318          
BLAST of CX292750 vs. ExPASy Swiss-Prot
Match: IFR_PEA (Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.700e-71
Identity = 132/225 (58.67%), Postives = 171/225 (76.00%), Query Frame = 2
Query:    8 GHTLIADQVKIIAAIKEAGNVKRFFPSEFGIDDDRIHGAVEPAKSTYDVKAKIRRAVEAEGIPYTYVASYGLNGHFLPNLSQPEATAPPRDKVVILGDGNPKAVYNKEDDVATFTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSMWERKIGKTLEREYVSEEQLLKNIQEAAPPLGRLLSIYHSAFVEGVQTDFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 682
            G  LI DQVK+I AIKEAGNVKRFFPSEFG+D DR H AVEP +  ++ KA IRR VE+EG+PYTY+  +   G+FL NL+Q +AT PPRDKVVILGDGN +  Y  E DV T+TI+A +DP TLNK ++I+ P N  + N+++++WE+KIGKTLE+ YVSEEQ+LK+IQ ++ P   LL++YHS  ++G    ++I+P+  VEA   YPDVKYTT DEYLNQFV
Sbjct:   96 GRLLIEDQVKVIKAIKEAGNVKRFFPSEFGLDVDR-HDAVEPVRQVFEEKASIRRVVESEGVPYTYLCCHAFTGYFLRNLAQIDATDPPRDKVVILGDGNVRGAYVTEADVGTYTIRAANDPNTLNKAVHIRLPNNYLTANEVIALWEKKIGKTLEKTYVSEEQVLKDIQTSSFPHNYLLALYHSQQIKG-DAVYEIDPAKDVEAYDAYPDVKYTTADEYLNQFV 318          
BLAST of CX292750 vs. ExPASy Swiss-Prot
Match: IFRH_MAIZE (Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.270e-70
Identity = 135/226 (59.73%), Postives = 166/226 (73.45%), Query Frame = 2
Query:    5 VGHTLIADQVKIIAAIKEAGNVKRFFPSEFGIDDDRIHGAVEPAKSTYDVKAKIRRAVEAEGIPYTYVASYGLNGHFLPNLSQPEATAPPRDKVVILGDGNPKAVYNKEDDVATFTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSMWERKIGKTLEREYVSEEQLLKNIQEAAPPLGRLLSIYHSAFVEGVQTDFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 682
            +G   IADQ +++ AIKEAGNVKRFFPSEFG+D DR  G VEPAKS    K  IRRA EA GIPYTY  +    G  LP + Q  A  PP DK V+LGDG+ KAV+ +E D+AT+T+ A DDPR  NK LYI+PP N  S N+L+S+WE+K GKT  REYV EE +LK IQE+  PL  +L+I H+AFV G QT F+I+P+ GV+AS+LYPDVKYTTVDEYLN+F+
Sbjct:   85 LGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRT-GIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYVPEEAVLKQIQESPIPLNIILAIGHAAFVRGEQTGFEIDPAKGVDASELYPDVKYTTVDEYLNRFL 309          
BLAST of CX292750 vs. ExPASy Swiss-Prot
Match: IFRH_LUPAL (Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.712e-54
Identity = 106/226 (46.90%), Postives = 154/226 (68.14%), Query Frame = 2
Query:   11 HTLIADQVKIIAAIKEAGNVKRFFPSEFGIDDDRIHGAVEPAKSTYDVKAKIRRAVEAEGIPYTYVASYGLNGHFLPNLSQPEATAPPRDKVVILGDGNPKAVYNKEDDVATFTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSMWERKIGKTLEREYVSEEQLLKNIQ--EAAPPLGRLLSIYHSAFVEGVQTDFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 682
            H L+  Q+K++ AIK+AGN+KRF PSEFG+D   +  A+EP + T+D K  +R+A+E   IP+TY+++    G+F  NLSQ +   PPRDKV++ GDGN K VY  EDDVAT+TIK +DDPRTLNK +Y++PP NI +  +L+  WE  IGK LE+  +SE+  L  ++  + A  +G  +  ++  F EG  T+F+I  + G EAS+LYP+V YT +D+YL  +V
Sbjct:   91 HNLLT-QLKLVEAIKDAGNIKRFLPSEFGMDPALMGHALEPGRVTFDEKMTVRKAIEEANIPFTYISANCFAGYFAGNLSQMKTLLPPRDKVLLYGDGNVKPVYMDEDDVATYTIKTIDDPRTLNKTVYLRPPENILTHKELIEKWEELIGKQLEKNSISEKDFLSTLKGLDFASQVG--VGHFYHIFYEGCLTNFEIGEN-GEEASELYPEVNYTRMDQYLKVYV 312          
BLAST of CX292750 vs. ExPASy Swiss-Prot
Match: IGS1_PETHY (Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.973e-47
Identity = 100/215 (46.51%), Postives = 140/215 (65.12%), Query Frame = 2
Query:   26 DQVKIIAAIKEAGNVKRFFPSEFGIDDDRIHGAVEPAKSTYDVKAKIRRAVEAEGIPYTYVASYGLNGHFLPNLSQPEATAPPRDKVVILGDGNPKAVYNKEDDVATFTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSMWERKIGKTLEREYVSEEQLLKNIQEAAPPLGRLLSIYHSAFVEGVQTDFKIEPSFGVEASQLYPDVKYTTVDEYL 670
            +Q+K+I AIKEAGN+KRF PSEFG + DR+  A+   ++  D K KIRRA EA GIP+T+V++  L  +F+  L  P   +   ++V I G G+ KAV N E+DVA +TIKA DDPR  N+ L I+PP NI S  DLVS WE+  G TL+  ++SE++++K  +    P     SI H+ F+ G Q  F++     +EAS+LYP+  YT+VDEYL
Sbjct:   93 EQLKVIEAIKEAGNIKRFVPSEFGNEVDRVR-ALPRFQAVLDNKKKIRRATEAAGIPFTFVSANSLTAYFVDYLLHPRQKS---EQVTIYGSGDAKAVLNYEEDVAAYTIKAADDPRAANRVLIIKPPKNIVSQLDLVSSWEKTTGSTLKMTHISEQEIIKLSESINFPENIHASILHNIFIAGAQLSFELTQDHDLEASELYPNYNYTSVDEYL 303          
BLAST of CX292750 vs. ExPASy Swiss-Prot
Match: LAR_DESUN (Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.120e-42
Identity = 92/226 (40.71%), Postives = 128/226 (56.64%), Query Frame = 2
Query:    5 VGHTLIADQVKIIAAIKEAGNVKRFFPSEFGIDDDRIHGAVEPAKSTYDVKAKIRRAVEAEGIPYTYVASYGLNGHFLPNLSQPEATAPPRDKVVILGDGNPKAVYNKEDDVATFTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSMWERKIGKTLEREYVSEEQLLKNIQEAAPPLGRLLSIYHSAFVEGVQTDFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 682
            VG   + DQ+ ++ AIK    +KRF PSEFG D DR    VEP  + Y  K  +RRAVE  GIP+T +    +      +   P    PP D+  I GDGN KA +   +D+  FT+K +DD RTLNKN++ +P  N YS N+L S+WE+KIG+TL R  V+ ++LL +  E   P   + S  H  F+ G Q +F I+    VE   LYPD K+ ++D+    FV
Sbjct:   93 VGGARLLDQLTLLEAIKSVKTIKRFLPSEFGHDVDRTD-PVEPGLTMYKEKRLVRRAVEEYGIPFTNICCNSIASWPYYDNCHPSQVPPPMDQFQIYGDGNTKAYFIDGNDIGKFTMKTIDDIRTLNKNVHFRPSSNCYSINELASLWEKKIGRTLPRFTVTADKLLAHAAENIIPESIVSSFTHDIFINGCQVNFSIDEHSDVEIDTLYPDEKFRSLDDCYEDFV 317          
The following BLAST results are available for this feature:
BLAST of CX292750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
IFRH_SOLTU3.009e-8870.04Isoflavone reductase homolog OS=Solanum tuberosum ... [more]
IFRH_ARATH4.506e-7664.04Isoflavone reductase homolog P3 OS=Arabidopsis tha... [more]
IFRH_TOBAC2.236e-7561.67Isoflavone reductase homolog A622 OS=Nicotiana tab... [more]
IFR_MEDSA1.500e-7159.11Isoflavone reductase OS=Medicago sativa GN=IFR PE=... [more]
IFR_CICAR3.342e-7159.03Isoflavone reductase OS=Cicer arietinum GN=IFR PE=... [more]
IFR_PEA5.700e-7158.67Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 ... [more]
IFRH_MAIZE1.270e-7059.73Isoflavone reductase homolog IRL OS=Zea mays GN=IR... [more]
IFRH_LUPAL3.712e-5446.90Isoflavone reductase homolog OS=Lupinus albus PE=2... [more]
IGS1_PETHY1.973e-4746.51Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 P... [more]
LAR_DESUN1.120e-4240.71Leucoanthocyanidin reductase OS=Desmodium uncinatu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC04019B04SK FlavFr1 Citrus clementina cDNA clone C04019B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292750 ID=CX292750; Name=CX292750; organism=Citrus clementina; type=EST; length=709bp
AACAGTTGGTCACACTTTAATAGCCGATCAGGTCAAGATTATTGCTGCCA
TTAAAGAAGCCGGCAACGTTAAGAGATTCTTCCCGTCGGAATTTGGAATT
GATGATGATCGAATCCATGGAGCCGTAGAGCCAGCAAAATCAACGTATGA
CGTAAAGGCGAAAATCCGCCGAGCCGTTGAGGCAGAAGGCATTCCGTATA
CTTATGTAGCATCGTACGGTTTGAATGGCCACTTCCTTCCCAATTTGTCG
CAGCCTGAGGCCACTGCCCCCCCTAGGGATAAGGTCGTCATCTTAGGTGA
TGGAAATCCAAAAGCTGTTTATAACAAGGAAGATGATGTTGCAACCTTCA
CCATCAAAGCGGTTGACGATCCGAGAACCTTGAACAAAAACCTTTACATT
CAGCCTCCCGGCAATATTTACTCGTTCAATGATCTTGTGTCTATGTGGGA
GAGAAAGATTGGCAAAACCCTCGAAAGGGAGTATGTTTCAGAAGAGCAGC
TCCTAAAGAATATTCAAGAAGCTGCACCTCCACTCGGGAGGTTGTTATCA
ATTTATCACTCTGCTTTCGTGGAGGGAGTTCAAACCGACTTCAAGATTGA
ACCATCGTTTGGAGTTGAAGCCTCGCAGCTTTATCCTGATGTCAAGTACA
CTACAGTTGATGAGTACCTCAATCAGTTTGTGTAACCCTTCTCTGCTTCC
AGCTGCAGC
back to top