CX292788
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292788 vs. ExPASy Swiss-Prot
Match: CAX5_ARATH (Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.241e-40 Identity = 81/90 (90.00%), Postives = 84/90 (93.33%), Query Frame = 3 Query: 60 DISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDPTPDD 329 D+SLGVAIGSS QISMF +PFCVVIGW+MG MDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDP DD Sbjct: 351 DLSLGVAIGSSIQISMFAVPFCVVIGWMMGAQMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDPHQDD 440
BLAST of CX292788 vs. ExPASy Swiss-Prot
Match: CAX2_ORYSJ (Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 3.236e-39 Identity = 80/92 (86.96%), Postives = 85/92 (92.39%), Query Frame = 3 Query: 60 DISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDPTPDDNQ 335 DI+LGVAIGSSTQISMF IPFCVVIGWIMG+ MDLNFQLFETATLFITV+VVAF LQEGTSNYFKGLMLILCYLIVAASFFVH DP +N+ Sbjct: 346 DITLGVAIGSSTQISMFVIPFCVVIGWIMGQQMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPDSSNNK 437
BLAST of CX292788 vs. ExPASy Swiss-Prot
Match: CAX2_ARATH (Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 9.415e-39 Identity = 78/89 (87.64%), Postives = 83/89 (93.26%), Query Frame = 3 Query: 60 DISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDPTPD 326 D+SLGVAIGSS QISMF +PFCVVIGW+MG+ MDLNFQLFETA LFITVIVVAFFLQEG+SNYFKGLMLILCYLIVAASFFVHEDP D Sbjct: 351 DLSLGVAIGSSIQISMFAVPFCVVIGWMMGQQMDLNFQLFETAMLFITVIVVAFFLQEGSSNYFKGLMLILCYLIVAASFFVHEDPHQD 439
BLAST of CX292788 vs. ExPASy Swiss-Prot
Match: CAX3_ORYSJ (Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 8.812e-37 Identity = 75/91 (82.42%), Postives = 82/91 (90.11%), Query Frame = 3 Query: 60 DISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDPTPDDN 332 DI+LGVAIGSSTQISMF IPFCVVIGW+MG+ MDLNFQLFETATLFITV+VVAF LQ+G +NY KGLMLILCYLIVAASFFVH DP D+ Sbjct: 327 DITLGVAIGSSTQISMFVIPFCVVIGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLILCYLIVAASFFVHVDPQSSDD 417
BLAST of CX292788 vs. ExPASy Swiss-Prot
Match: CAX6_ARATH (Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3) HSP 1 Score: 149.828 bits (377), Expect = 1.272e-35 Identity = 76/87 (87.36%), Postives = 79/87 (90.80%), Query Frame = 3 Query: 60 DISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQ-EGTSNYFKGLMLILCYLIVAASFFVHEDP 317 D+SLGVAIGSS QISMF +PFCVVIGW+MG MDLN QLFETATL ITVIVVAFFLQ EGTSNYFK LMLILCYLIVAASFFVHEDP Sbjct: 359 DLSLGVAIGSSIQISMFAVPFCVVIGWMMGAQMDLNLQLFETATLLITVIVVAFFLQLEGTSNYFKRLMLILCYLIVAASFFVHEDP 445
BLAST of CX292788 vs. ExPASy Swiss-Prot
Match: CAX4_ORYSJ (Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.400e-34 Identity = 70/86 (81.40%), Postives = 77/86 (89.53%), Query Frame = 3 Query: 60 DISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDP 317 DISLGVAIGSS QISMFGIPFCVV+GW+MG+PMDLNF LFETA+L TV+VVAF LQ+GTSN KGLML LCYLIVAASF+VH DP Sbjct: 351 DISLGVAIGSSIQISMFGIPFCVVMGWMMGKPMDLNFHLFETASLLTTVLVVAFLLQDGTSNCVKGLMLFLCYLIVAASFYVHADP 436
BLAST of CX292788 vs. ExPASy Swiss-Prot
Match: CAX3_ARATH (Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.103e-26 Identity = 53/93 (56.99%), Postives = 74/93 (79.57%), Query Frame = 3 Query: 60 DISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDPTPDDNQV 338 DISLGVA+GS+TQIS+F +P V++ WI+G MDLNF + ET++L + +I+ AF LQ+GTS+Y KGL+L+LCY+I+AA FFV + P P+D V Sbjct: 353 DISLGVALGSATQISLFVVPLSVIVAWILGIKMDLNFNILETSSLALAIIITAFTLQDGTSHYMKGLVLLLCYVIIAACFFVDQIPQPNDLDV 445
BLAST of CX292788 vs. ExPASy Swiss-Prot
Match: CAX1A_ORYSJ (Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24 Identity = 51/91 (56.04%), Postives = 70/91 (76.92%), Query Frame = 3 Query: 60 DISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDPTPDDN 332 DI+LGVA+GS+TQISMF +P V++ WIMG MDL+F+L ET +LF+ V+V AF LQ+GTS+Y KG++L+LCY+++ A FFV P N Sbjct: 343 DITLGVALGSATQISMFVVPLSVLVAWIMGVQMDLDFKLLETGSLFMAVLVTAFTLQDGTSHYLKGILLLLCYIVIGACFFVARQPAGHAN 433
BLAST of CX292788 vs. ExPASy Swiss-Prot
Match: CAX1B_ORYSJ (Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.246e-23 Identity = 47/82 (57.32%), Postives = 65/82 (79.27%), Query Frame = 3 Query: 60 DISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFV 305 DI+LGV++GS+TQISMF +P V++ W MG PMDL+F L ET +LF+ ++V AF LQEG S+Y KGL+L+LCY +++ FFV Sbjct: 353 DITLGVSLGSATQISMFVVPVSVIVAWTMGIPMDLDFNLLETGSLFLAILVTAFTLQEGESHYLKGLILVLCYAVISVCFFV 434
BLAST of CX292788 vs. ExPASy Swiss-Prot
Match: CAX4_ARATH (Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 9.459e-23 Identity = 46/87 (52.87%), Postives = 67/87 (77.01%), Query Frame = 3 Query: 60 DISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDPT 320 DI+LG+A+GS+TQI++F +P V++ W MG MDLNF L ETA ++++V + LQ+GTSNY KGL+L+LCY+++AA FFV P+ Sbjct: 355 DITLGIALGSATQIALFVVPVTVLVAWTMGIEMDLNFNLLETACFALSILVTSLVLQDGTSNYMKGLVLLLCYVVIAACFFVSNSPS 441 The following BLAST results are available for this feature:
BLAST of CX292788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292788 ID=CX292788; Name=CX292788; organism=Citrus clementina; type=EST; length=695bpback to top |