CX293811
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293811 vs. ExPASy Swiss-Prot
Match: SBP_ARATH (Putative selenium-binding protein OS=Arabidopsis thaliana GN=At4g14030 PE=2 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 2.397e-78 Identity = 138/191 (72.25%), Postives = 165/191 (86.39%), Query Frame = 2 Query: 2 MATDT-VVAEHRSSNNGH-GCCAKG-PGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSEIHVK 565 MAT+T VVA SN G GCC G PGYATPL AMSGP EKL+YVT +YTGTG +KPDYLATVD DPSS SYS VIHRLP+P++GDELHHSGWNSCSSC+GD+S RR+LVLPSL+SGRIY +DT++NPRAPSL+K V+P +I KTGL++PHTAHCLA+G+ILVSCLGD++GNA+GNGFLLLDS+ ++K Sbjct: 1 MATETEVVAPVTVSNGGSKGCCKYGGPGYATPLAAMSGPSEKLIYVTAVYTGTGIDKPDYLATVDVDPSSPSYSSVIHRLPMPFVGDELHHSGWNSCSSCHGDASVDRRYLVLPSLISGRIYAIDTKENPRAPSLYKYVDPKEIADKTGLAFPHTAHCLATGEILVSCLGDEEGNAKGNGFLLLDSDFNIK 191
BLAST of CX293811 vs. ExPASy Swiss-Prot
Match: SBP1A_XENLA (Selenium-binding protein 1-A OS=Xenopus laevis GN=selenbp1-A PE=2 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 6.559e-60 Identity = 107/172 (62.21%), Postives = 131/172 (76.16%), Query Frame = 2 Query: 56 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-IHVKG 568 C + GPGY +PLDAM GPRE+++Y+ C+Y TG KPDYLATVD DP S SYS+VIHRLP+P + DELHHSGWN+CSSCYGDSS R L+LP L+S RIYVVD +PRAP +HK VEP ++ K GL+ PHT+HCL G+I++S LGD GN +G GF+LLD E VKG Sbjct: 4 CGSCGPGYKSPLDAMKGPREEIVYLPCIYRSTGINKPDYLATVDVDPKSPSYSQVIHRLPMPNVNDELHHSGWNTCSSCYGDSSKVRNKLILPCLISSRIYVVDVGSDPRAPRIHKTVEPYEVFWKCGLANPHTSHCLGCGEIMISSLGDPCGNGKG-GFVLLDGETFEVKG 174
BLAST of CX293811 vs. ExPASy Swiss-Prot
Match: SBP1_RAT (Selenium-binding protein 1 OS=Rattus norvegicus GN=Selenbp1 PE=1 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 2.492e-59 Identity = 106/172 (61.63%), Postives = 131/172 (76.16%), Query Frame = 2 Query: 56 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-IHVKG 568 C GPGYATPL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S YS+VIHRLP+P++ DELHHSGWN+CSSC+GDS+ R L+LPS++S RIYVVD PRAP LHKV+EP +I K L HT+HCLASG++++S LGD GN +G GF+LLD E VKG Sbjct: 5 CTKCGPGYATPLEAMKGPREEIVYLPCIYRNTGIEAPDYLATVDVDPKSPHYSQVIHRLPMPHLKDELHHSGWNTCSSCFGDSTKSRDKLILPSIISSRIYVVDVGSEPRAPKLHKVIEPNEIHAKCNLGNLHTSHCLASGEVMISSLGDPQGNGKG-GFVLLDGETFEVKG 175
BLAST of CX293811 vs. ExPASy Swiss-Prot
Match: SBP1_HUMAN (Selenium-binding protein 1 OS=Homo sapiens GN=SELENBP1 PE=1 SV=2) HSP 1 Score: 227.639 bits (579), Expect = 3.255e-59 Identity = 107/172 (62.21%), Postives = 131/172 (76.16%), Query Frame = 2 Query: 56 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-IHVKG 568 C GPGY+TPL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S Y +VIHRLP+P + DELHHSGWN+CSSC+GDS+ R LVLPSL+S RIYVVD PRAP LHKV+EP DI K L++ HT+HCLASG++++S LGD GN +G GF+LLD E VKG Sbjct: 5 CGNCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKG-GFVLLDGETFEVKG 175
BLAST of CX293811 vs. ExPASy Swiss-Prot
Match: SBP1_BOVIN (Selenium-binding protein 1 OS=Bos taurus GN=SELENBP1 PE=1 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 4.251e-59 Identity = 108/172 (62.79%), Postives = 132/172 (76.74%), Query Frame = 2 Query: 59 CAK-GPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-IHVKG 568 C K GPGY +PL+AM GPRE+L+Y+ C+Y TG E PDYLATVD +P S YS+VIHRLP+P + DELHHSGWN+CSSC+GDS+ R L+LPSL+S R+YVVD PRAP LHKVVEP +I K LSY HT+HCLASG++++S LGD GN +G GF+LLD E VKG Sbjct: 5 CGKCGPGYPSPLEAMKGPREELVYLPCIYRNTGTEAPDYLATVDVNPKSPQYSQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLLLPSLISSRVYVVDVATEPRAPKLHKVVEPEEIHAKCDLSYLHTSHCLASGEVMISALGDPRGNGKG-GFVLLDGETFEVKG 175
BLAST of CX293811 vs. ExPASy Swiss-Prot
Match: SBP1_MOUSE (Selenium-binding protein 1 OS=Mus musculus GN=Selenbp1 PE=1 SV=2) HSP 1 Score: 226.868 bits (577), Expect = 5.553e-59 Identity = 105/172 (61.05%), Postives = 131/172 (76.16%), Query Frame = 2 Query: 56 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-IHVKG 568 C GPGY+TPL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S YS+VIHRLP+PY+ DELHHSGWN+CSSC+GDS+ R L+LP L+S RIYVVD PRAP LHKV+E ++I K +S HT+HCLASG+++VS LGD GN +G+ F+LLD E VKG Sbjct: 5 CTKCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYSQVIHRLPMPYLKDELHHSGWNTCSSCFGDSTKSRNKLILPGLISSRIYVVDVGSEPRAPKLHKVIEASEIQAKCNVSSLHTSHCLASGEVMVSTLGDLQGNGKGS-FVLLDGETFEVKG 175
BLAST of CX293811 vs. ExPASy Swiss-Prot
Match: SBP2_MOUSE (Selenium-binding protein 2 OS=Mus musculus GN=Selenbp2 PE=1 SV=2) HSP 1 Score: 225.713 bits (574), Expect = 1.237e-58 Identity = 104/172 (60.47%), Postives = 130/172 (75.58%), Query Frame = 2 Query: 56 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-IHVKG 568 C GPGY TPL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S YS+VIHRLP+PY+ DELHHSGWN+CSSC+GDS+ R L+LP L+S RIYVVD PRAP LHKV+E ++I K +S HT+HCLASG+++V+ LGD GN +G+ F+LLD E VKG Sbjct: 5 CTKCGPGYPTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYSQVIHRLPMPYLKDELHHSGWNTCSSCFGDSTKSRNKLILPGLISSRIYVVDVGSEPRAPKLHKVIEASEIQAKCNVSNTHTSHCLASGEVMVNTLGDLQGNGKGS-FVLLDGETFEVKG 175
BLAST of CX293811 vs. ExPASy Swiss-Prot
Match: SBP1B_XENLA (Selenium-binding protein 1-B OS=Xenopus laevis GN=selenbp1-B PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 1.616e-58 Identity = 105/172 (61.05%), Postives = 130/172 (75.58%), Query Frame = 2 Query: 56 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-IHVKG 568 C + GPGY +PLDAM GPRE+++Y+ C+Y TG KPDYLATVD DP S +YS+VIHRLP+P + DELHHSGWN+CSSCYGDSS R L+LP L+S R+YVVD +PRAP LHK VEP ++ K GL+ HT+HCL G+I++S LGD GN +G GF+LLD E VKG Sbjct: 4 CGSCGPGYKSPLDAMKGPREEIVYLPCIYRSTGINKPDYLATVDVDPKSPTYSQVIHRLPMPNVNDELHHSGWNTCSSCYGDSSKVRNKLILPCLISSRVYVVDVGTDPRAPRLHKTVEPHEVYWKCGLANLHTSHCLGCGEIMISALGDPCGNGKG-GFVLLDGETFEVKG 174
BLAST of CX293811 vs. ExPASy Swiss-Prot
Match: SBP1_PONAB (Selenium-binding protein 1 OS=Pongo abelii GN=SELENBP1 PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 3.599e-58 Identity = 106/172 (61.63%), Postives = 131/172 (76.16%), Query Frame = 2 Query: 56 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-IHVKG 568 C GPGY+TPL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S Y +VIHRLP+P + DELHHSGWN+CSSC+GDS+ R LVLPSL+S RIYVVD PRA LHKV+EP DI K L++ HT+HCLASG++++S LGD GN +G GF+LLD+E VKG Sbjct: 5 CGNCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRALKLHKVIEPKDIHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKG-GFVLLDAETFEVKG 175
BLAST of CX293811 vs. ExPASy Swiss-Prot
Match: SBP1_DANRE (Selenium-binding protein 1 OS=Danio rerio GN=selenbp1 PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 8.018e-58 Identity = 101/166 (60.84%), Postives = 126/166 (75.90%), Query Frame = 2 Query: 56 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE 553 C GPGY TPLDAM GPRE+++Y+ C+Y T +KPDYLATVD +P S ++ KVIHRLP+P + DELHHSGWN+CSSC+ D S +R L+LPSL+S RIYVVD +PRAP LHK VEP D+ K GL+ PHT+HCL SG I++S +GD GN +G GF+LLD E Sbjct: 5 CSGCGPGYKTPLDAMKGPREEIVYLPCIYRNTDIQKPDYLATVDINPQSPNFCKVIHRLPMPNLKDELHHSGWNACSSCFDDPSKRRNRLILPSLISSRIYVVDVGTDPRAPRLHKTVEPTDLFWKCGLANPHTSHCLGSGQIMISTMGDPSGNGKG-GFVLLDGE 169 The following BLAST results are available for this feature:
BLAST of CX293811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293811 ID=CX293811; Name=CX293811; organism=Citrus clementina; type=EST; length=570bpback to top |