CX293837
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293837 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 3.430e-35 Identity = 83/185 (44.86%), Postives = 115/185 (62.16%), Query Frame = 3 Query: 36 NLIALDVSYNPLSGNLPRNFAKGGLSMNVIGSSINANNLQDGKALGMMQCLHSNTKCSN-KVPSSSFSIKCGGTQIASASGIEFDDDSQTLEAASFYTSSGNQWAVSNTGNFISSPNGPLYIAQTDSQITGTLDSELYKTARISPSSLRYYGLGLKNGKYRIDLHFAEITMEDSLS--WKGLGRR 581 +L +DVSYN LSG+LP + L++N++ ++ L D + L + CL N C+ K S FSI CGG +I S + F+ + + L ASF S+G +WA S+ G F S N +YI+ + SQ TLDSEL+++AR+S SSLRYYGLGL+NG Y + L FAEI + S S W+GLGRR Sbjct: 361 SLSNVDVSYNDLSGSLPSWVSLPNLNLNLVANNFTLEGL-DNRVLSGLNCLQKNFPCNRGKGIYSDFSINCGGPEIRSVTEAVFEREDEDLGPASFVVSAGQRWAASSVGLFAGSSNN-IYISTSQSQFVNTLDSELFQSARLSASSLRYYGLGLENGGYTVTLQFAEIQILGSTSNTWRGLGRR 543
BLAST of CX293837 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 4.479e-35 Identity = 81/181 (44.75%), Postives = 112/181 (61.88%), Query Frame = 3 Query: 48 LDVSYNPLSGNLPRNFAKGGLSMNVIGSSINANNLQDGKALGMMQCLHSNTKCSN-KVPSSSFSIKCGGTQIASASGIEFDDDSQTLEAASFYTSSGNQWAVSNTGNFISSPNGPLYIAQTDSQITGTLDSELYKTARISPSSLRYYGLGLKNGKYRIDLHFAEITM--EDSLSWKGLGRR 581 +DVSYN LSG+LP + L +N++ ++ L D + L + CL N C+ K S FSI CGG + S +G F+ + + ASF+ S+G +WA S+ G F S N +YIA + SQ TLDSEL+++AR+S SS+RYYGLGL+NG Y + L FAEI + S +WKGLGRR Sbjct: 366 VDVSYNDLSGSLPSWVSLPSLKLNLVANNFTLEGL-DNRVLPGLNCLQKNFPCNRGKGIYSDFSINCGGPEKRSVTGALFEREDEDFGPASFFVSAGQRWAASSVGLFAGSSNN-IYIATSQSQFVNTLDSELFQSARLSASSVRYYGLGLENGGYTVTLQFAEIQILGSTSTTWKGLGRR 544
BLAST of CX293837 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 3.225e-17 Identity = 56/181 (30.94%), Postives = 92/181 (50.83%), Query Frame = 3 Query: 48 LDVSYNPLSGNLPRNFAKGGLSMNVIGS--SINANNLQDGKALGMMQCLHSNTKCSNKVPSSSFSIKCGGTQIASASGIEFDDDSQTLEAASFYTSSGNQWAVSNTGNFISSPNGPLYIAQTDSQITGTLDSELYKTARISPSSLRYYGLGLKNGKYRIDLHFAEITMEDSLSWKGLGRRV 584 +D+SYN + P + L +N+I S S+ N++Q CL + C SS I CGG ++ E+ DD AS ++S +W S++G ++ + +G Y+A + E YKTAR++ SL+YYGL ++ G Y++ L+FAEI + ++ LGRR+ Sbjct: 355 IDLSYNNFTQ--PPTLSCNQLDVNLISSYPSVTNNSVQ--------WCLRKDLPCPGDAHHSSLFINCGGNRL-KVDKDEYADDLNK-RGASTFSSVSERWGYSSSGAWLGN-DGATYLATDTFNLINESTPEYYKTARLASQSLKYYGLCMRRGSYKVQLYFAEIMFSNDQTYSSLGRRL 522
BLAST of CX293837 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.501e-17 Identity = 57/181 (31.49%), Postives = 88/181 (48.62%), Query Frame = 3 Query: 48 LDVSYNPLSGNLPRNFAKGGLSMNVIGS--SINANNLQDGKALGMMQCLHSNTKCSNKVPSSSFSIKCGGTQIASASGIEFDDDSQTLEAASFYTSSGNQWAVSNTGNFISSPNGPLYIAQTDSQITGTLDSELYKTARISPSSLRYYGLGLKNGKYRIDLHFAEITMEDSLSWKGLGRRV 584 LD+S N + P + L +N+I S S+ N++Q CL C SS I CGG+++ DD + S ++S +W S++G ++ + Y+A + E YKTAR+SP SL+YYGL L+ G Y++ LHFAEI + ++ LGRR+ Sbjct: 357 LDLSDNNFTQ--PPTLSCNQLDVNLISSYPSVTDNSVQ--------WCLREGLPCPEDAKQSSLFINCGGSRLKIGKDTYTDDLNS--RGQSTFSSVSERWGYSSSGVWLGKEDAG-YLATDRFNLINGSTPEYYKTARLSPQSLKYYGLCLRRGSYKLQLHFAEIMFSNDQTFNSLGRRI 524
BLAST of CX293837 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.090e-16 Identity = 58/187 (31.02%), Postives = 94/187 (50.27%), Query Frame = 3 Query: 48 LDVSYNPLS--GNLPRNFAKGGLSMNVIGSSINANNLQDGKA--LGMMQCLHSNTKCSNKVPSSSFSIKCGGTQIASASGIEFDDDSQTLEAASFYTSSGNQWAVSNTGNFISSPN-GPLYIAQTDSQITGTLDSE---LYKTARISPSSLRYYGLGLKNGKYRIDLHFAEITMEDSLSWKGLGRRV 584 +DVS+N + ++P + ++ N++ S N G L M C+H K+ I CGG ++ I + D + A+ + + +WA+S+TGNF+ + + Y Q S+++ S LY+TAR+SP SL YYG+ L NG Y ++LHFAEI D + LG+R+ Sbjct: 356 VDVSFNNFTDESSIPSHDCNR-VTSNLVESFALGNKSHKGSTCFLQRMPCVHPKRYHLYKL-----YINCGGGEVKVDKEITYQADDEPKGASMYVLGANKRWALSSTGNFMDNDDDADEYTVQNTSRLSVNASSPSFGLYRTARVSPLSLTYYGICLGNGNYTVNLHFAEIIFTDDNTLYSLGKRL 536
BLAST of CX293837 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 1.656e-13 Identity = 62/201 (30.85%), Postives = 94/201 (46.77%), Query Frame = 3 Query: 48 LDVSYNPLSGNLPR---NFAKGG---LSMNVIGSSINANNLQDGKALGMMQCLHS----NTKCS-NKVPS-----------SSFSIKCGGTQIASASGIEFDDDSQTLEAASFYTSSGNQWAVSNTGNFISSPNGPLYIA-QTDSQITGTLDSELYKTARISPSSLRYYGLGLKNGKYRIDLHFAEITMEDSLSWKGLGRR 581 LD+S+N LSG +P N GG + N++ S+ + G + + S N C N V S ++ I CGG +++ I D LE+ + S N W +N G F+ + P + +++S +D LY ARIS SL YY L L+NG Y ++LHFAEI + +++ LGRR Sbjct: 283 LDLSFNKLSGAIPNTYINLRDGGYIYFTGNMLNGSVPDWMVNKGYKIDLSYNNFSVDPTNAVCKYNNVLSCMRNYQCPKTFNALHINCGGDEMSINGTIYESDKYDRLES---WYESRNGWFSNNVGVFVDDKHVPERVTIESNSSELNVVDFGLYTQARISAISLTYYALCLENGNYNVNLHFAEIMFNGNNNYQSLGRR 480
BLAST of CX293837 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.550e-11 Identity = 55/188 (29.26%), Postives = 89/188 (47.34%), Query Frame = 3 Query: 42 IALDVSYNPLSGNLPRNFA---KGGLSMNVIGSSINANNLQDGKALGMMQCLHSNTKCSNKVPSSSFSIKCGGTQ--IASASGIEFDDDSQTLE--AASFYTSSGNQWAVSNTGNFISSPNGPLYIAQTDSQITGTLDSELYKTARISPSSLRYYGLGLKNGKYRIDLHFAEITMEDSLSWKGLGRRV 584 I +D+SYN L P + A L++N+ S+ K+ + C+ + KC SS + CGG+ + E + +E AA ++ W S+TG+F+ N + + + S+LYK+ARI+P SL Y+ L+NG Y I+L FAEI + ++ LGRR+ Sbjct: 361 ITVDLSYNNLKWQSPESRACRPNMNLNLNLFQSTSTK------KSSKFLPCI-KDFKCPRY--SSCLHVNCGGSDMYVKEKKTKELYEGDGNVEGGAAKYFLKPDANWGFSSTGDFMDDNN--FQNTRFTMFVPASNQSDLYKSARIAPVSLTYFHACLENGNYTINLDFAEIRFTNDENYNRLGRRL 537 The following BLAST results are available for this feature:
BLAST of CX293837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX293837 ID=CX293837; Name=CX293837; organism=Citrus clementina; type=EST; length=584bpback to top |