CX293843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293843 vs. ExPASy Swiss-Prot
Match: NACA_PINTA (Nascent polypeptide-associated complex subunit alpha-like protein OS=Pinus taeda PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.376e-45 Identity = 97/120 (80.83%), Postives = 104/120 (86.67%), Query Frame = 2 Query: 179 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQDDE-XVDETGVEPKDIELVMTQAGVPRSRAVKAL 535 AMLKLGMKP+ GVSRVT+KKSKNILFVIS PDVFKSPTSDTYI FGEAKIEDLSSQLQTQAAEQFK PN +V KPESS Q+DE VD+TGVEPKDIELVMTQAGV R++AVKAL Sbjct: 72 AMLKLGMKPVSGVSRVTIKKSKNILFVISNPDVFKSPTSDTYIAFGEAKIEDLSSQLQTQAAEQFKA--PNLSHVTMKPESSTAAQEDEDEVDDTGVEPKDIELVMTQAGVSRTKAVKAL 189
BLAST of CX293843 vs. ExPASy Swiss-Prot
Match: NACA1_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana GN=At3g12390 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.797e-45 Identity = 99/121 (81.82%), Postives = 105/121 (86.78%), Query Frame = 2 Query: 179 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESS--AMVQDDEXVDETGVEPKDIELVMTQAGVPRSRAVKAL 535 AMLKLGMKPI GVSRVTVKKSKNILFVISKPDVFKSP SDTY++FGEAKIEDLSSQ+Q+QAAEQFK P+ NV SK ESS A+VQDDE VDE GVEPKDIELVMTQAGV R AVKAL Sbjct: 69 AMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDLSSQIQSQAAEQFKA--PDLSNVISKGESSSAAVVQDDEEVDEEGVEPKDIELVMTQAGVSRPNAVKAL 187
BLAST of CX293843 vs. ExPASy Swiss-Prot
Match: NACA3_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 3 OS=Arabidopsis thaliana GN=At5g13850 PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.287e-43 Identity = 99/126 (78.57%), Postives = 105/126 (83.33%), Query Frame = 2 Query: 179 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESS-----AMVQ--DDEXVDETGVEPKDIELVMTQAGVPRSRAVKAL 535 AMLKLGMKPI GVSRVTVKKSKNILFVISKPDVFKSP SDTY++FGEAKIEDLSSQLQ+QAAEQFK PN NV S+ E+S A VQ DDE VDE GVEPKDIELVMTQAGV + RAVKAL Sbjct: 65 AMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDLSSQLQSQAAEQFKA--PNLSNVISQGETSSAATAAAVQDDDDEEVDEEGVEPKDIELVMTQAGVSKPRAVKAL 188
BLAST of CX293843 vs. ExPASy Swiss-Prot
Match: NACA2_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidopsis thaliana GN=At3g49470 PE=2 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 5.598e-39 Identity = 82/125 (65.60%), Postives = 103/125 (82.40%), Query Frame = 2 Query: 179 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSA------MVQDDEXVDETGVEPKDIELVMTQAGVPRSRAVKAL 535 AMLKLGMKP+ GVSRVT+K++KN+LF ISKPDVFKSP S+TY++FGEAKIEDLSSQLQTQAA+QF++ P G + + E+S + +D+E +DETGVE +DI+LVMTQAGV RS+AVKAL Sbjct: 79 AMLKLGMKPVTGVSRVTIKRTKNVLFFISKPDVFKSPHSETYVIFGEAKIEDLSSQLQTQAAQQFRM--PEIGATSQRAEASTATVEAQVEEDEEEIDETGVEARDIDLVMTQAGVSRSKAVKAL 201
BLAST of CX293843 vs. ExPASy Swiss-Prot
Match: NACA4_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 4 OS=Arabidopsis thaliana GN=At4g10480 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 4.739e-38 Identity = 84/125 (67.20%), Postives = 101/125 (80.80%), Query Frame = 2 Query: 179 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPP-----PNT-GNVASKPESSAMVQDDEXVDETGVEPKDIELVMTQAGVPRSRAVKAL 535 AMLKLGMKP+ VSRVT+K+SKN+LFVISKPDVFKSP S+TY++FGEAKI+D+SSQLQ QAA++FK+P PNT G+ A+ +DDE VDETGVE KDI+LVMTQAGV R +AVKAL Sbjct: 74 AMLKLGMKPVTDVSRVTIKRSKNVLFVISKPDVFKSPNSETYVIFGEAKIDDMSSQLQAQAAQRFKMPDVASMIPNTDGSEAATVAQEE--EDDEDVDETGVEAKDIDLVMTQAGVSRPKAVKAL 196
BLAST of CX293843 vs. ExPASy Swiss-Prot
Match: NACA5_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 5 OS=Arabidopsis thaliana GN=At1g33040 PE=2 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 5.793e-36 Identity = 75/124 (60.48%), Postives = 102/124 (82.26%), Query Frame = 2 Query: 179 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPP-----PNTGNVASKPESSAMVQDDEXVDETGVEPKDIELVMTQAGVPRSRAVKAL 535 A+LKLGMKP+ VSRVT+K++KN+LFVISKPDV+KSP ++TY++FGEAK++DLSSQLQTQAA++FK+P PN G+ A+ A +D++ VD+TGVE +DI+LVMTQAGV +++AV AL Sbjct: 71 AVLKLGMKPVSDVSRVTIKRAKNVLFVISKPDVYKSPNAETYVIFGEAKVDDLSSQLQTQAAQRFKMPDVTSMLPNAGSEATM-APLAEEEDEDDVDDTGVEARDIDLVMTQAGVSKAKAVSAL 193
BLAST of CX293843 vs. ExPASy Swiss-Prot
Match: NACA_ORENI (Nascent polypeptide-associated complex subunit alpha OS=Oreochromis niloticus GN=naca PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 3.755e-35 Identity = 76/121 (62.81%), Postives = 95/121 (78.51%), Query Frame = 2 Query: 179 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQ--DDEXVDETGVEPKDIELVMTQAGVPRSRAVKAL 535 AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q AAE+FKVP NV ++ + + ++E VDETGVE KDIELVM+QA V R++AV+AL Sbjct: 79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVPGETVSNVQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRAL 199
BLAST of CX293843 vs. ExPASy Swiss-Prot
Match: NACAD_MOUSE (NAC-alpha domain-containing protein 1 OS=Mus musculus GN=Nacad PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 4.151e-34 Identity = 74/126 (58.73%), Postives = 94/126 (74.60%), Query Frame = 2 Query: 179 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVP-------PPNTGNVASKPESSAMVQDDEXVDETGVEPKDIELVMTQAGVPRSRAVKAL 535 AM KLG++ I GV+R+T++KSKNILFVI+KPDVFKSP SDTY+VFGEAKIEDLS Q+ AAE+FKVP P + +PE ++DE V+E G+EP+DIELVM QA V R++AV+AL Sbjct: 1363 AMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVVFGEAKIEDLSQQVHKAAAEKFKVPSEPSALVPELSPGPRVRPECEEQEEEDEEVEEAGLEPRDIELVMAQANVTRAKAVRAL 1488
BLAST of CX293843 vs. ExPASy Swiss-Prot
Match: NACA_XENTR (Nascent polypeptide-associated complex subunit alpha OS=Xenopus tropicalis GN=naca PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 7.081e-34 Identity = 74/121 (61.16%), Postives = 94/121 (77.69%), Query Frame = 2 Query: 179 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQ--DDEXVDETGVEPKDIELVMTQAGVPRSRAVKAL 535 AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q AAE+FKV N+ ++ + + ++E VDETGVE KDIELVM+QA V R++AV+AL Sbjct: 78 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRAL 198
BLAST of CX293843 vs. ExPASy Swiss-Prot
Match: NACA_MOUSE (Nascent polypeptide-associated complex subunit alpha OS=Mus musculus GN=Naca PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 7.081e-34 Identity = 74/121 (61.16%), Postives = 94/121 (77.69%), Query Frame = 2 Query: 179 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQ--DDEXVDETGVEPKDIELVMTQAGVPRSRAVKAL 535 AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q AAE+FKV N+ ++ + + ++E VDETGVE KDIELVM+QA V R++AV+AL Sbjct: 79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRAL 199 The following BLAST results are available for this feature:
BLAST of CX293843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293843 ID=CX293843; Name=CX293843; organism=Citrus clementina; type=EST; length=537bpback to top |