CX293875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_ARATH (Probable phenylalanyl-tRNA synthetase alpha chain OS=Arabidopsis thaliana GN=At4g39280 PE=2 SV=3) HSP 1 Score: 289.656 bits (740), Expect = 5.586e-78 Identity = 141/172 (81.98%), Postives = 149/172 (86.63%), Query Frame = 3 Query: 3 NYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKYFS 518 NYAP+RKKVATDLTRENLQ +WKELEFKEYNF AKG P + GHLH LLKVRKQ KDIF+QMGFEEMPTNN+VESSFWNFDALFQPQQHPARDSHDTFFL+ PSTTR LPEDYVERVKRVHE +WKREEANKNLLRTHTTAVSSRML ALA+KPF PKKYFS Sbjct: 171 NYAPERKKVATDLTRENLQ--NWKELEFKEYNFKAKGAPVDAGHLHALLKVRKQFKDIFVQMGFEEMPTNNYVESSFWNFDALFQPQQHPARDSHDTFFLKVPSTTRTLPEDYVERVKRVHESGGYGSRGYNYDWKREEANKNLLRTHTTAVSSRMLYALAQKPFVPKKYFS 340
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFAB_XENLA (Phenylalanyl-tRNA synthetase alpha chain B OS=Xenopus laevis GN=farsa-B PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 1.339e-55 Identity = 104/166 (62.65%), Postives = 120/166 (72.29%), Query Frame = 3 Query: 24 KVATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALA-EKPFAPKKYFS 518 K TDLT E + G W+E +FK YNFNA G E GHLHPLLKVR Q + IFL+MGF EMPTNNF+ESSFWNFDALFQPQQHPARD HDTFFL++P+ E P +Y+ERVK+VH +W EA KN+LRTHTTAVS+RML LA +K F P KYFS Sbjct: 188 KQETDLTPEMIASGSWREKQFKGYNFNALGVMPECGHLHPLLKVRTQFRQIFLEMGFTEMPTNNFIESSFWNFDALFQPQQHPARDQHDTFFLQDPALATEFPMEYLERVKKVHSEGGYGSQGYKYDWSIHEAQKNILRTHTTAVSARMLYKLAHQKEFTPVKYFS 353
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_DANRE (Phenylalanyl-tRNA synthetase alpha chain OS=Danio rerio GN=farsa PE=2 SV=2) HSP 1 Score: 214.927 bits (546), Expect = 1.748e-55 Identity = 102/166 (61.45%), Postives = 121/166 (72.89%), Query Frame = 3 Query: 24 KVATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALA-EKPFAPKKYFS 518 K T+LT E + G+WKE +FK YNF A G + GHLHPL+KVR Q + IFL+MGF EMPTNNF+ESSFWNFD+LFQPQQHPARD HDTFF+ +P+ E P DY+ERVK+VH +WK EEA KNLLRTHTTAVS+RML LA ++ F P KYFS Sbjct: 187 KQETELTPEMIASGNWKEKKFKPYNFEAMGVAPDCGHLHPLMKVRTQFRQIFLEMGFTEMPTNNFIESSFWNFDSLFQPQQHPARDQHDTFFISDPALAHEFPRDYLERVKKVHSEGGYGSQGYKYDWKIEEAQKNLLRTHTTAVSARMLYKLAQQEKFTPVKYFS 352
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFAA_XENLA (Phenylalanyl-tRNA synthetase alpha chain A OS=Xenopus laevis GN=farsa-A PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 5.087e-55 Identity = 103/166 (62.05%), Postives = 120/166 (72.29%), Query Frame = 3 Query: 24 KVATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALA-EKPFAPKKYFS 518 K TDLT E + G W+E +FK YNF+A G E GHLHPLLKVR Q + IFL+MGF EMPTNNF+ESSFWNFDALFQPQQHPARD HDTFFL++P+ E P +Y+ERVK+VH +W EA KN+LRTHTTAVS+RML LA +K F P KYFS Sbjct: 188 KQETDLTPEMIASGSWREKQFKGYNFDALGVMPECGHLHPLLKVRTQFRQIFLEMGFTEMPTNNFIESSFWNFDALFQPQQHPARDQHDTFFLQDPALATEFPMEYLERVKKVHSEGGYGSQGYKYDWSIHEAQKNILRTHTTAVSARMLYKLALQKDFTPVKYFS 353
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_DROME (Probable phenylalanyl-tRNA synthetase alpha chain OS=Drosophila melanogaster GN=CG2263 PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 6.644e-55 Identity = 104/173 (60.12%), Postives = 124/173 (71.68%), Query Frame = 3 Query: 6 YAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALA--EKPFAPKKYFS 518 +A K+ TDLT E L G W +L+FK YNF+A G P GHLHPLLKVR + + IFL+MGF EMPTNN+VESSFWNFDAL+QPQQHPARD+HDTFF+ P+ + + P+DY+ERVK+VH +WK EEA KNLLRTHTTAVS+RML LA E F KYFS Sbjct: 180 FATTLTKLETDLTVEMLANGLWDQLKFKAYNFDALGAPPTRGHLHPLLKVRTEFRQIFLEMGFSEMPTNNYVESSFWNFDALYQPQQHPARDAHDTFFVNHPAKSHKFPQDYLERVKKVHSVGGYGSKGYGYDWKLEEAQKNLLRTHTTAVSARMLYKLANQEGGFKAAKYFS 352
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_CHICK (Phenylalanyl-tRNA synthetase alpha chain OS=Gallus gallus GN=FARSA PE=1 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 3.297e-54 Identity = 103/163 (63.19%), Postives = 119/163 (73.01%), Query Frame = 3 Query: 33 TDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEK-PFAPKKYFS 518 TDLT E + G W++L FK YNF+A G P GHLHPLLKVR QL+ IFL+MGF EMPT+NFVESSFWNFDALFQPQQHPARD HDTFFL++P+ ELP +Y+ RVK+VH EWK EEA KNLLRTHTT+ S+R L LA + F P KYFS Sbjct: 193 TDLTPEMIATGSWRKLPFKAYNFSALGLPPTCGHLHPLLKVRSQLRQIFLEMGFTEMPTDNFVESSFWNFDALFQPQQHPARDQHDTFFLQDPAEAPELPANYMARVKKVHSQGGYGSQGYKYEWKVEEARKNLLRTHTTSASARALYHLARQGKFTPVKYFS 355
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_RAT (Phenylalanyl-tRNA synthetase alpha chain OS=Rattus norvegicus GN=Farsa PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 4.307e-54 Identity = 100/166 (60.24%), Postives = 118/166 (71.08%), Query Frame = 3 Query: 24 KVATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAE-KPFAPKKYFS 518 K +L+ E + G W++ FK YNF+A+G + GHLHPLLKVR Q + IFL+MGF EMPT+NF+ESSFWNFDALFQPQQHPARD HDTFFL +P+ +LP DYV+RVKR H WK EEA KNLLRTHTTA S+R L LA+ KPF P KYFS Sbjct: 187 KQEAELSPEMISSGSWRDRPFKPYNFSARGVLPDSGHLHPLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMDYVQRVKRTHSQGGYGSQGYKYTWKLEEARKNLLRTHTTAASARALYRLAQKKPFTPAKYFS 352
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_MOUSE (Phenylalanyl-tRNA synthetase alpha chain OS=Mus musculus GN=Farsa PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 2.791e-53 Identity = 99/166 (59.64%), Postives = 117/166 (70.48%), Query Frame = 3 Query: 24 KVATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAE-KPFAPKKYFS 518 K +L+ E + G W++ FK YNF+A+G + GHLHPLLKVR Q + IFL+MGF EMPT+NF+ESSFWNFDALFQPQQHPARD HDTFFL +P+ +LP YV+RVKR H WK EEA KNLLRTHTTA S+R L LA+ KPF P KYFS Sbjct: 187 KQEAELSPEMISSGSWRDRPFKPYNFSARGVLPDSGHLHPLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMGYVQRVKRTHSQGGYGSQGYKYTWKLEEARKNLLRTHTTAASARALYQLAQKKPFTPAKYFS 352
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_PONAB (Phenylalanyl-tRNA synthetase alpha chain OS=Pongo abelii GN=FARSA PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 3.646e-53 Identity = 99/166 (59.64%), Postives = 117/166 (70.48%), Query Frame = 3 Query: 24 KVATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAE-KPFAPKKYFS 518 K T+L+ E + G W++ FK YNF A G + GHLHPLLKVR Q + IFL+MGF EMPT+NF+ESSFWNFDALFQPQQHPARD HDTFFL +P+ +LP DYV+RVKR H WK +EA KNLLRTHTT+ S+R L LA+ KPF P KYFS Sbjct: 187 KQETELSPEMISSGSWRDRPFKPYNFLAHGVLPDSGHLHPLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMDYVQRVKRTHSQGGYGSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQKKPFTPVKYFS 352
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_HUMAN (Phenylalanyl-tRNA synthetase alpha chain OS=Homo sapiens GN=FARSA PE=1 SV=3) HSP 1 Score: 207.223 bits (526), Expect = 3.646e-53 Identity = 99/166 (59.64%), Postives = 117/166 (70.48%), Query Frame = 3 Query: 24 KVATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAE-KPFAPKKYFS 518 K T+L+ E + G W++ FK YNF A G + GHLHPLLKVR Q + IFL+MGF EMPT+NF+ESSFWNFDALFQPQQHPARD HDTFFL +P+ +LP DYV+RVKR H WK +EA KNLLRTHTT+ S+R L LA+ KPF P KYFS Sbjct: 187 KQETELSPEMISSGSWRDRPFKPYNFLAHGVLPDSGHLHPLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMDYVQRVKRTHSQGGYGSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQKKPFTPVKYFS 352 The following BLAST results are available for this feature:
BLAST of CX293875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293875 ID=CX293875; Name=CX293875; organism=Citrus clementina; type=EST; length=518bpback to top |