CX293916

Overview
NameCX293916
Unique NameCX293916
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length508
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10353 contig Ccv1_Contig10353:42..549. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX293916 vs. ExPASy Swiss-Prot
Match: EOMT1_OCIBA (Eugenol O-methyltransferase OS=Ocimum basilicum GN=EOMT1 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.345e-25
Identity = 58/153 (37.91%), Postives = 90/153 (58.82%), Query Frame = 1
Query:   34 VTVRELFEGQAHLYKGIVKNLSSMSVKCAVELGIADAIHSHGRPITLSELASALNIQPTKTRSLFHFMRLLVHMGLFSKTKVDNHNEQEEAYGLTPTSTLLIKDKPYCLSPLVTGLLDQDYVSSFQHLSRWF-KGNDLTLWESFGGLKFWDYL 489
            ++  +L + Q H++  +    +SMS+KCA++LGI D +H HGRP+TLS+L  ++ I   KT+     MR LV+   F   + +N N QE  Y LTP S LL+K+ P  ++PLV  +LD  + + + H+S WF      T +E+  G  FW+ L
Sbjct:   10 LSTEQLLQAQVHVWNHMYAFANSMSLKCAIQLGIPDILHKHGRPMTLSQLLQSIPINKEKTQCFQRLMRALVNSNFF--IEENNSNNQEVCYWLTPASCLLLKEAPLTVTPLVQVVLDPTFTNPWHHMSEWFTHEKHATQFEAANGCTFWEKL 160          
BLAST of CX293916 vs. ExPASy Swiss-Prot
Match: CVMT1_OCIBA (Chavicol O-methyltransferase OS=Ocimum basilicum GN=CVOMT1 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.345e-25
Identity = 59/153 (38.56%), Postives = 91/153 (59.48%), Query Frame = 1
Query:   34 VTVRELFEGQAHLYKGIVKNLSSMSVKCAVELGIADAIHSHGRPITLSELASALNIQPTKTRSLFHFMRLLVHMGLFSKTKVDNHNEQEEAYGLTPTSTLLIKDKPYCLSPLVTGLLDQDYVSSFQHLSRWFK-GNDLTLWESFGGLKFWDYL 489
            ++  +L + QAH++  +    +SMS+KCA++LGI D +H H  P+TLS+L  A+ I   K++S    MR LV+   F +   +N N QE  Y LTP S LL+K  P  ++PLV  +LD  + + + ++S WFK  N  T +E+  G  FW+ L
Sbjct:   10 LSTEQLLQAQAHVWNHMYAFANSMSLKCAIQLGIPDILHKHDHPMTLSQLLKAIPINKEKSQSFQRLMRALVNSNFFIE---ENSNNQEVCYWLTPASRLLLKGAPLTVAPLVQVVLDPTFTNPWHYMSEWFKHENHATQFEAANGCTFWEKL 159          
BLAST of CX293916 vs. ExPASy Swiss-Prot
Match: 7OMT9_MEDSA (Isoflavone-7-O-methyltransferase 9 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 2.593e-24
Identity = 60/151 (39.74%), Postives = 88/151 (58.28%), Query Frame = 1
Query:   46 ELFEGQAHLYKGIVKNLSSMSVKCAVELGIADAIHSHGRPITLSELASALNIQPTKTRSLFHFMRLLVHMGLFSKTKVDNHNEQEEAYGLTPTSTLLIKDKPYCLSPLVTGLLDQDYVSSFQHLSRWFKGNDLTLWESFGGLKFWDYLNQN 498
            E+F+ QA LYK I   + SMS+K AV + I + IH+HG+PI+LS L S L +  +K  ++   MR L H G F     +   ++EE+Y LT  S LL++    CL+P+V  +LD     S+  L +W    DLTL+    G  FWD+L++N
Sbjct:   12 EIFKAQALLYKHIYAFIDSMSLKWAVGMNIPNIIHNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFF-----EIITKEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKN 157          
BLAST of CX293916 vs. ExPASy Swiss-Prot
Match: 7OMT8_MEDSA (Isoflavone-7-O-methyltransferase 8 OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.387e-24
Identity = 60/151 (39.74%), Postives = 88/151 (58.28%), Query Frame = 1
Query:   46 ELFEGQAHLYKGIVKNLSSMSVKCAVELGIADAIHSHGRPITLSELASALNIQPTKTRSLFHFMRLLVHMGLFSKTKVDNHNEQEEAYGLTPTSTLLIKDKPYCLSPLVTGLLDQDYVSSFQHLSRWFKGNDLTLWESFGGLKFWDYLNQN 498
            E+F+ QA LYK I   + SMS+K AVE+ I + I +HG+PI+LS L S L +  +K  ++   MR L H G F     +   ++EE+Y LT  S LL++    CL+P+V  +LD     S+  L +W    DLTL+    G  FWD+L++N
Sbjct:   12 EIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFF-----EIITKEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKN 157          
BLAST of CX293916 vs. ExPASy Swiss-Prot
Match: 7OMT6_MEDSA (Isoflavone-7-O-methyltransferase 6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.387e-24
Identity = 60/151 (39.74%), Postives = 88/151 (58.28%), Query Frame = 1
Query:   46 ELFEGQAHLYKGIVKNLSSMSVKCAVELGIADAIHSHGRPITLSELASALNIQPTKTRSLFHFMRLLVHMGLFSKTKVDNHNEQEEAYGLTPTSTLLIKDKPYCLSPLVTGLLDQDYVSSFQHLSRWFKGNDLTLWESFGGLKFWDYLNQN 498
            E+F+ QA LYK I   + SMS+K AVE+ I + I +HG+PI+LS L S L +  +K  ++   MR L H G F     +   ++EE+Y LT  S LL++    CL+P+V  +LD     S+  L +W    DLTL+    G  FWD+L++N
Sbjct:   12 EIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFF-----EIITKEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKN 157          
BLAST of CX293916 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.595e-19
Identity = 51/152 (33.55%), Postives = 81/152 (53.29%), Query Frame = 1
Query:   43 RELFEGQAHLYKGIVKNLSSMSVKCAVELGIADAIHSHGRPITLSELASALNIQPTKTRSLFHFMRLLVHMGLFSKTKVDNHNEQEEAYGLTPTSTLLIKDKPYCLSPLVTGLLDQDYVSSFQHLSRWFKGNDLTLWESFGGLKFWDYLNQN 498
            ++    QA L+  I     S+ +KCAV+L +A+ IH+ G  +TLSEL+S L  QP    +L+  MR LVHM LF+K  +D     E  YGL P +  L+K    C+   +  + D+D+++ + +L     G   T +E   G   W Y+ ++
Sbjct:    5 KDNLSSQAKLWNFIYGFAESLVLKCAVQLDLANIIHNSGTSMTLSELSSRLPSQPVNEDALYRVMRYLVHMKLFTKASIDG----ELRYGLAPPAKYLVKGWDKCMVGSILAITDKDFMAPWHYLKDGLSGESGTAFEKALGTNIWGYMAEH 152          
BLAST of CX293916 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 9.876e-16
Identity = 43/145 (29.66%), Postives = 82/145 (56.55%), Query Frame = 1
Query:   55 EGQAHLYKGIVKNLSSMSVKCAVELGIADAIHSHGRPITLSELASALNIQPTKTRSLFHFMRLLVHMGLFSKTKVDNHNEQEEAYGLTPTSTLLIKDKPYCLSPLVTGLLDQDYVSSFQHLSRWFKGNDLTLWESFGGLKFWDYL 489
            + QAH++K I     S+ ++CAVELGI D I ++ +P+ L++LAS L +      +L+  +R LV M +    +V+  ++ ++ Y L P +TLL ++    + P++ G+  +D+++ +  +      N  T +E   G+  W+YL
Sbjct:   13 KAQAHVWKIIYGFADSLVLRCAVELGIVDIIDNNNQPMALADLASKLPVSDVNCDNLYRILRYLVKMEIL---RVEKSDDGQKKYALEPIATLLSRNAKRSMVPMILGMTQKDFMTPWHSMKDGLSDNG-TAFEKAMGMTIWEYL 153          
BLAST of CX293916 vs. ExPASy Swiss-Prot
Match: ZRP4_MAIZE (O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.177e-14
Identity = 49/162 (30.25%), Postives = 81/162 (50.00%), Query Frame = 1
Query:   16 DIENDGVTVRELFEGQAHLYKGIVKNLSSMSVKCAVELGIADAIHSHGRPITLSELASALNIQPTKTRSLFHFMRLLVHMGLFSKTKV--DNHNEQEEAYGLTPTSTLLI--KDKPYCLSPLVTGLLDQDYVSSFQHLSRWFKGN--DLTLWESFGGLKFWD 483
            ++  +  T + L + Q  L+      + SM++K A+ L IADAIH HG   +LS++ S +++ P++  SL   MR+L    +F    +   + ++ E  Y LTP S LLI  +      +PL   +LD   VS F  L  WF+    D  +++   G   W+
Sbjct:    2 ELSPNNSTDQSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILSKVHLHPSRVSSLRRLMRVLTTTNVFGTQPLGGGSDDDSEPVYTLTPVSRLLIGSQSSQLAQTPLAAMVLDPTIVSPFSELGAWFQHELPDPCIFKHTHGRGIWE 163          
BLAST of CX293916 vs. ExPASy Swiss-Prot
Match: COOMT_COPJA (Columbamine O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.130e-11
Identity = 46/145 (31.72%), Postives = 75/145 (51.72%), Query Frame = 1
Query:   55 EGQAHLYKGIVKNLSSMSVKCAVELGIADAIHSHGRPITLSELASALNIQPTKTRSLFHFMRLLVHMGLFSKTKVDNHNEQEEAYGLTPTSTLLIKDKPYCLSPLVTGLLDQDYVSSFQHL-------SRWFKGNDLTLWESFGG 468
            + QA ++K +     ++ ++  V LGI D IH++G P+TLS+L + L ++ T      HFMR LVHM LF  T   +   +E+ Y LTP S LL+      L+P V      +  S + H+         +++ ND +++E   G
Sbjct:   14 KAQAQVWKHMFGFAETIMLRSTVSLGIPDIIHNNG-PVTLSQLVTHLPLKSTSIDRFHHFMRYLVHMQLF--TISTDQITKEDKYELTPASKLLVHGHQKSLAPYVMLQTHPEEFSVWSHVINVLDGKKPYWESNDTSMYEKTEG 155          
The following BLAST results are available for this feature:
BLAST of CX293916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
EOMT1_OCIBA2.345e-2537.91Eugenol O-methyltransferase OS=Ocimum basilicum GN... [more]
CVMT1_OCIBA2.345e-2538.56Chavicol O-methyltransferase OS=Ocimum basilicum G... [more]
7OMT9_MEDSA2.593e-2439.74Isoflavone-7-O-methyltransferase 9 OS=Medicago sat... [more]
7OMT8_MEDSA3.387e-2439.74Isoflavone-7-O-methyltransferase 8 OS=Medicago sat... [more]
7OMT6_MEDSA3.387e-2439.74Isoflavone-7-O-methyltransferase 6 OS=Medicago sat... [more]
6OMT_COPJA5.595e-1933.55(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
4OMT_COPJA9.876e-1629.663'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
ZRP4_MAIZE3.177e-1430.25O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 ... [more]
COOMT_COPJA1.130e-1131.72Columbamine O-methyltransferase OS=Coptis japonica... [more]
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Properties
Property NameValue
Genbank descriptionC05002E03SK FlavRip1 Citrus clementina cDNA clone C05002E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293916 ID=CX293916; Name=CX293916; organism=Citrus clementina; type=EST; length=508bp
ATTGAAGTTATGGGTGACATTGAAAATGACGGGGTAACTGTAAGAGAGTT
GTTTGAAGGTCAAGCTCATCTGTATAAGGGCATCGTTAAGAATTTAAGTT
CTATGTCAGTCAAATGTGCGGTTGAGCTAGGCATAGCGGACGCAATTCAC
AGCCACGGACGACCAATCACTCTGTCTGAGTTAGCCTCAGCTCTCAACAT
TCAGCCTACAAAAACTCGAAGTCTATTTCATTTCATGCGTCTGTTAGTTC
ACATGGGCTTGTTTTCAAAAACCAAAGTTGACAACCACAACGAGCAAGAA
GAAGCATATGGCCTCACACCTACTTCGACCCTGCTCATCAAAGATAAGCC
CTACTGTTTGTCACCACTTGTCACTGGATTGCTTGACCAAGATTATGTCT
CTTCATTCCAGCATTTAAGTAGGTGGTTCAAAGGGAACGATCTCACATTA
TGGGAATCTTTCGGCGGGTTGAAGTTTTGGGACTATCTGAACCAGAACAC
TGCATTAA
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