CX294013

Overview
NameCX294013
Unique NameCX294013
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length319
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2154 contig Ccv1_Contig2154:56..374. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.775e-23
Identity = 52/98 (53.06%), Postives = 65/98 (66.33%), Query Frame = 3
Query:   24 KNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            +N  + PP P G P IGNLHQL    PH   W+LSKKYGP+M L+LG  P+++VSS + AK+ LK H L  CSRP     R+LSYN LD+  SPY +Y
Sbjct:   26 RNYQRTPPSPPGCPIIGNLHQLG-ELPHQSLWKLSKKYGPVMLLKLGRVPTVIVSSSETAKQALKIHDLHCCSRPGFAGARELSYNYLDIAFSPYDDY 122          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 5.451e-22
Identity = 50/98 (51.02%), Postives = 63/98 (64.29%), Query Frame = 3
Query:   24 KNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            + + + PP P G P IGNLHQL    PH   W LSKKYGP+M L+ G  P++VVSS + AK+ LK H L  CSRP+    R LSYN LD+  SP+ +Y
Sbjct:   26 RQHQRKPPSPPGFPIIGNLHQLG-ELPHQSLWSLSKKYGPVMLLKFGSIPTVVVSSSETAKQALKIHDLNCCSRPSLAGPRALSYNYLDIVFSPFNDY 122          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 1.214e-21
Identity = 49/98 (50.00%), Postives = 65/98 (66.33%), Query Frame = 3
Query:   24 KNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            + N + PP P G P IGNLHQL    PH   W LSK YGP+M L+LG  P++VVSS + AK++LK + L  CSRP+    ++LSYN LD+  SP+ +Y
Sbjct:   26 RTNQQQPPSPPGFPIIGNLHQLG-ELPHQSLWSLSKTYGPVMLLKLGSVPTVVVSSSETAKQVLKINDLHCCSRPSLAGAKELSYNYLDIAFSPFDDY 122          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.072e-21
Identity = 52/101 (51.49%), Postives = 69/101 (68.32%), Query Frame = 3
Query:   21 SKNNT--KLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            SKN+   KLPPGP  LPFIG++H L   +PH +  +L+KKYGPLM L+LG   ++VV+S  MAKE+LKTH + F SRP  +A   + Y+  D+  SPY EY
Sbjct:   23 SKNSQTKKLPPGPWKLPFIGSMHHLAGGRPHRVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAMDIICYDRCDIAFSPYGEY 123          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.534e-21
Identity = 49/98 (50.00%), Postives = 63/98 (64.29%), Query Frame = 3
Query:   24 KNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            + + + PP P G P IGNLHQL    PH   W LSKKYG +M L+ G  P++VVSS + AK++LK H L  CSRP+    R LSYN LD+  SP+ +Y
Sbjct:   26 QQHQRKPPSPPGFPIIGNLHQLG-ELPHQSLWRLSKKYGHVMLLKFGSIPTVVVSSSETAKQVLKIHDLHCCSRPSLAGPRALSYNYLDIAFSPFDDY 122          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 1.028e-20
Identity = 55/105 (52.38%), Postives = 69/105 (65.71%), Query Frame = 3
Query:    3 LQRNISSKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            L++N +SK N  LPP P  LP IGNLH L    PH  F +LS KYGPL+ LRLG  P +V+SS + A+ +LKT+ L+ CSRP  V   KLSY   D+T +PY EY
Sbjct:   21 LKQNKTSKFN--LPPSPSSLPIIGNLHHL-AGLPHRCFHKLSIKYGPLVFLRLGSVPVVVISSSEAAEAVLKTNDLECCSRPKTVGSGKLSYGFKDITFAPYGEY 122          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.343e-20
Identity = 47/104 (45.19%), Postives = 69/104 (66.35%), Query Frame = 3
Query:    6 QRNISSKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            ++ +++    KLPPGP  LPFIG +H L    PH +  +L++KYGPLM L+LG   ++VV+S +MAK++LKTH + F SRP  +A   + YN  D+  SPY +Y
Sbjct:   20 KKYLNNSQTKKLPPGPWKLPFIGGMHHLAGGLPHRVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRRDIAFSPYGDY 123          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.754e-20
Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = 3
Query:   45 PGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            P P G P IGNLHQL   + H   W+LSKKYGP+M L+LG  P+L++SS + AK+ L+ + L  CSRP+    R+LSYN LD++ SPY EY
Sbjct:   33 PSPPGFPIIGNLHQLGELQ-HQSLWKLSKKYGPVMLLKLGKVPTLILSSSETAKQALRDYDLHCCSRPSLAGGRELSYNNLDMSSSPYNEY 122          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.290e-20
Identity = 47/91 (51.65%), Postives = 61/91 (67.03%), Query Frame = 3
Query:   45 PGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            P P G P IGNLHQ+    PH   W+LSKKYGP+M L LG  P++VVSS   A+++L+ H L  C+RP+    R+LSYN LD+  SPY +Y
Sbjct:   32 PCPPGFPIIGNLHQIG-ELPHQTLWKLSKKYGPVMHLMLGRVPTVVVSSSDTARQVLRVHDLHCCTRPSLSGPRELSYNYLDIAFSPYDDY 121          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.290e-20
Identity = 50/93 (53.76%), Postives = 62/93 (66.67%), Query Frame = 3
Query:   36 KLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYE 314
            KLPPGP+ LP IGNLH L    PH  F  LS+K+GP+M L  GF P +V+SS + A+E LKT  L+ CSRP  VA R +SYN  D+  +PY E
Sbjct:   31 KLPPGPKTLPIIGNLHNLT-GLPHTCFRNLSQKFGPVMLLHFGFVPVVVISSKEGAEEALKTQDLECCSRPETVATRMISYNFKDIGFAPYGE 122          
The following BLAST results are available for this feature:
BLAST of CX294013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
C71BV_ARATH3.775e-2353.06Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C71BY_ARATH5.451e-2251.02Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71B9_ARATH1.214e-2150.00Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71D6_SOLCH2.072e-2151.49Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71BX_ARATH3.534e-2150.00Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C71B2_ARATH1.028e-2052.38Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71D7_SOLCH1.343e-2045.19Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71BQ_ARATH1.754e-2052.75Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
C71BW_ARATH2.290e-2051.65Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71B7_ARATH2.290e-2053.76Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC05004G11SK FlavRip1 Citrus clementina cDNA clone C05004G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294013 ID=CX294013; Name=CX294013; organism=Citrus clementina; type=EST; length=319bp
TTTTGCAGAGGAACATATCCTCAAAAAATAATACTAAATTACCACCAGGC
CCCCGGGGCCTTCCTTTCATCGGTAACTTGCACCAGCTTAATGTCTCAAA
GCCTCACGTATTATTTTGGGAACTGTCAAAAAAATATGGCCCCCTCATGT
CCTTGCGTCTTGGGTTTTCGCCATCCTTAGTAGTTTCCTCAGTGAAAATG
GCTAAAGAGATATTGAAAACTCATGGCCTTCAATTTTGCAGCAGGCCAGC
CTAAGTAGCTCAACGAAAGTTATCTTACAATGGTCTTGATTTAACAATTT
CACCCTATTATGAATATTG
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