CX294088
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294088 vs. ExPASy Swiss-Prot
Match: ATPA_CITSI (ATP synthase subunit alpha, chloroplastic OS=Citrus sinensis GN=atpA PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.438e-38 Identity = 84/100 (84.00%), Postives = 84/100 (84.00%), Query Frame = 1 Query: 1 TQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 300 TQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFT RFLLQEQ Sbjct: 407 TQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTEEAEALLQEAIQEQKERFLLQEQ 506
BLAST of CX294088 vs. ExPASy Swiss-Prot
Match: ATPA_EUCGG (ATP synthase subunit alpha, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=atpA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 2.712e-37 Identity = 81/100 (81.00%), Postives = 83/100 (83.00%), Query Frame = 1 Query: 1 TQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 300 TQNQLARGQRLRELLKQ+QAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTY+KTNKPQFQEIISSTK FT RFLLQEQ Sbjct: 407 TQNQLARGQRLRELLKQSQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTEEAEALLKEAIQEQKERFLLQEQ 506
BLAST of CX294088 vs. ExPASy Swiss-Prot
Match: ATPA_DAUCA (ATP synthase subunit alpha, chloroplastic OS=Daucus carota GN=atpA PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.542e-37 Identity = 80/101 (79.21%), Postives = 84/101 (83.17%), Query Frame = 1 Query: 1 TQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQL 303 TQNQLARGQRLRELLKQ+Q+APL VEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFT RF+LQEQ+ Sbjct: 407 TQNQLARGQRLRELLKQSQSAPLAVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTEEAEALLKEAIQEQMERFILQEQV 507
BLAST of CX294088 vs. ExPASy Swiss-Prot
Match: ATPA_TOBAC (ATP synthase subunit alpha, chloroplastic OS=Nicotiana tabacum GN=atpA PE=2 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 6.042e-37 Identity = 79/100 (79.00%), Postives = 83/100 (83.00%), Query Frame = 1 Query: 1 TQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 300 TQNQLARGQRLRELLKQ+Q+APLTVEEQIMTIYTGTNGYLDSLE+GQVRKFLVELRTYLKTNKPQFQEIISSTK FT RF+LQEQ Sbjct: 407 TQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEVGQVRKFLVELRTYLKTNKPQFQEIISSTKTFTEEAEALLKEAIQEQMDRFILQEQ 506
BLAST of CX294088 vs. ExPASy Swiss-Prot
Match: ATPA_NICTO (ATP synthase subunit alpha, chloroplastic OS=Nicotiana tomentosiformis GN=atpA PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 6.042e-37 Identity = 79/100 (79.00%), Postives = 83/100 (83.00%), Query Frame = 1 Query: 1 TQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 300 TQNQLARGQRLRELLKQ+Q+APLTVEEQIMTIYTGTNGYLDSLE+GQVRKFLVELRTYLKTNKPQFQEIISSTK FT RF+LQEQ Sbjct: 407 TQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEVGQVRKFLVELRTYLKTNKPQFQEIISSTKTFTEEAEALLKEAIQEQTDRFILQEQ 506
BLAST of CX294088 vs. ExPASy Swiss-Prot
Match: ATPA_NICSY (ATP synthase subunit alpha, chloroplastic OS=Nicotiana sylvestris GN=atpA PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 6.042e-37 Identity = 79/100 (79.00%), Postives = 83/100 (83.00%), Query Frame = 1 Query: 1 TQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 300 TQNQLARGQRLRELLKQ+Q+APLTVEEQIMTIYTGTNGYLDSLE+GQVRKFLVELRTYLKTNKPQFQEIISSTK FT RF+LQEQ Sbjct: 407 TQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEVGQVRKFLVELRTYLKTNKPQFQEIISSTKTFTEEAEALLKEAIQEQMDRFILQEQ 506
BLAST of CX294088 vs. ExPASy Swiss-Prot
Match: ATPA_ATRBE (ATP synthase subunit alpha, chloroplastic OS=Atropa belladonna GN=atpA PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 6.042e-37 Identity = 79/100 (79.00%), Postives = 83/100 (83.00%), Query Frame = 1 Query: 1 TQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 300 TQNQLARGQRLRELLKQ+Q+APLTVEEQIMTIYTGTNGYLDSLE+GQVRKFLVELRTYLKTNKPQFQEIISSTK FT RF+LQEQ Sbjct: 407 TQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEVGQVRKFLVELRTYLKTNKPQFQEIISSTKTFTEEAEALLKEAIQEQMKRFILQEQ 506
BLAST of CX294088 vs. ExPASy Swiss-Prot
Match: ATPA_MANES (ATP synthase subunit alpha, chloroplastic OS=Manihot esculenta GN=atpA PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 7.891e-37 Identity = 79/101 (78.22%), Postives = 84/101 (83.17%), Query Frame = 1 Query: 1 TQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQL 303 TQNQLARGQRLRELLKQ+Q+APLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTK FT RF++QEQ+ Sbjct: 407 TQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKTFTEEAETLLKEAIQEQKERFVIQEQV 507
BLAST of CX294088 vs. ExPASy Swiss-Prot
Match: ATPA_CARPA (ATP synthase subunit alpha, chloroplastic OS=Carica papaya GN=atpA PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.031e-36 Identity = 80/99 (80.81%), Postives = 82/99 (82.83%), Query Frame = 1 Query: 1 TQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQE 297 TQNQLARGQRLRELLKQ+Q+APLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTK FT RFLLQE Sbjct: 407 TQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKTFTEEAETILKEAIQEQMERFLLQE 505
BLAST of CX294088 vs. ExPASy Swiss-Prot
Match: ATPA_VITVI (ATP synthase subunit alpha, chloroplastic OS=Vitis vinifera GN=atpA PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.346e-36 Identity = 80/100 (80.00%), Postives = 81/100 (81.00%), Query Frame = 1 Query: 1 TQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 300 TQNQLARGQRLRELLKQ+QAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFL ELR YLKTNKPQFQEIISSTK FT RFLLQEQ Sbjct: 407 TQNQLARGQRLRELLKQSQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLAELRNYLKTNKPQFQEIISSTKTFTEEAETLLKETIQEQMERFLLQEQ 506 The following BLAST results are available for this feature:
BLAST of CX294088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294088 ID=CX294088; Name=CX294088; organism=Citrus clementina; type=EST; length=367bpback to top |