CX294169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294169 vs. ExPASy Swiss-Prot
Match: CTNS_ARATH (Cystinosin homolog OS=Arabidopsis thaliana GN=At5g40670 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 5.218e-48 Identity = 60/87 (68.97%), Postives = 73/87 (83.91%), Query Frame = 2 Query: 203 FQKYGRDQMIPVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVALPNHSWLWLINFFNAIQVIMT 463 F YG +MIPVAANDVAFS+HAV++T +TLFQI IYERG QKVS++++ IV VVW AA+CFF+ALP HSWLWLI+ FN+IQV MT Sbjct: 77 FDTYGDKEMIPVAANDVAFSIHAVVMTAVTLFQIFIYERGPQKVSRLAIGIVVVVWGFAAICFFIALPTHSWLWLISIFNSIQVFMT 163 HSP 2 Score: 81.2629 bits (199), Expect = 5.218e-48 Identity = 38/65 (58.46%), Postives = 50/65 (76.92%), Query Frame = 1 Query: 10 KLLGRISFVAWSVSFYPQVILNFRRKSCCGIELRFSCC*ILTKHSSYMIYNVVLFFSSTVQQQYF 204 +++G I+F +WS+SFYPQ+ILNFRR+S G+ F LTKHSSYMIYNV L+FS +Q+QYF Sbjct: 14 EIVGWIAFASWSISFYPQLILNFRRRSVVGLNFDFVML-NLTKHSSYMIYNVCLYFSPVIQKQYF 77
BLAST of CX294169 vs. ExPASy Swiss-Prot
Match: CTNS_DICDI (Cystinosin homolog OS=Dictyostelium discoideum GN=ctns PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.819e-25 Identity = 33/88 (37.50%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 203 FQKYGRDQMIPVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVALPN-HSWLWLINFFNAIQVIMT 463 + KYG IPV +D+AF++H +LT IT+ Q IY+RG QK SK+ + I +++W++ V + N +WLW+IN+++ +++ +T Sbjct: 72 YDKYGPP--IPVQQSDIAFAIHGFVLTAITIIQCFIYDRGNQKNSKLGIGIATLIWVSLIVMTILGFSNVFTWLWVINYYSYVKLFIT 157 HSP 2 Score: 62.003 bits (149), Expect = 2.819e-25 Identity = 29/69 (42.03%), Postives = 44/69 (63.77%), Query Frame = 1 Query: 13 LLGRISFVAWSVSFYPQVILNFRRKSCCGIELRFSCC*ILTKHSSYMIYNVVLFFSSTVQQQYFSEVRP 219 ++G I F WS+SFYPQVILNFR+K+ G+ F I T ++ Y ++N VL+F V+ +Y+ + P Sbjct: 10 IIGWIYFACWSLSFYPQVILNFRKKNVIGLSFDFLLFNI-TGYACYSVFNSVLYFDKLVKNEYYDKYGP 77
BLAST of CX294169 vs. ExPASy Swiss-Prot
Match: CTNS_HUMAN (Cystinosin OS=Homo sapiens GN=CTNS PE=1 SV=2) HSP 1 Score: 60.4622 bits (145), Expect = 5.084e-20 Identity = 33/79 (41.77%), Postives = 50/79 (63.29%), Query Frame = 2 Query: 233 PVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVALPN-HSWLWLINFFNAIQVIMTL 466 PV +NDV FS+HAV+LT+I + Q +YERG Q+VS ++ + + WL A V VA +WL + F+ I++ +TL Sbjct: 200 PVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPAIGFLVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTL 278 HSP 2 Score: 56.6102 bits (135), Expect = 5.084e-20 Identity = 27/64 (42.19%), Postives = 43/64 (67.19%), Query Frame = 1 Query: 10 KLLGRISFVAWSVSFYPQVILNFRRKSCCGIELRFSCC*ILTKHSSYMIYNVVLFFSSTVQQQY 201 +++G I FVAWS+SFYPQVI+N+RRKS G+ F LT +Y ++N+ L + +++Q+ Sbjct: 128 QVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVAL-NLTGFVAYSVFNIGLLWVPYIKEQF 190
BLAST of CX294169 vs. ExPASy Swiss-Prot
Match: CTNS_MOUSE (Cystinosin OS=Mus musculus GN=Ctns PE=1 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 1.455e-19 Identity = 33/79 (41.77%), Postives = 48/79 (60.76%), Query Frame = 2 Query: 233 PVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVALPN-HSWLWLINFFNAIQVIMTL 466 PV +ND FS+HAV LT+I + Q +YERG Q+VS S+ + + WL V VA +WL + F+ I++I+TL Sbjct: 200 PVDSNDAFFSLHAVALTLIVILQCCLYERGNQRVSWPSIGFLVLAWLFVLVTMIVAAVGITTWLQFLFCFSYIKLIITL 278 HSP 2 Score: 54.6842 bits (130), Expect = 1.455e-19 Identity = 27/64 (42.19%), Postives = 42/64 (65.62%), Query Frame = 1 Query: 10 KLLGRISFVAWSVSFYPQVILNFRRKSCCGIELRFSCC*ILTKHSSYMIYNVVLFFSSTVQQQY 201 +++G I F+AWSVSFYPQVI N+RRKS G+ F LT +Y ++N+ L + +Q+++ Sbjct: 128 QVIGWIYFMAWSVSFYPQVIQNWRRKSVIGLSFDFLAL-NLTGFVAYSVFNIGLLWVPYIQEEF 190
BLAST of CX294169 vs. ExPASy Swiss-Prot
Match: CTNS_BOVIN (Cystinosin OS=Bos taurus GN=CTNS PE=2 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.455e-19 Identity = 29/79 (36.71%), Postives = 51/79 (64.56%), Query Frame = 2 Query: 233 PVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFV-ALPNHSWLWLINFFNAIQVIMTL 466 PV +NDV FS+HAV LT++ + Q +YERG Q+VS ++++ + + WL + + A+ +WL + F+ I++ +TL Sbjct: 200 PVDSNDVFFSLHAVALTLVVIVQCLLYERGSQRVSWLAISFLVLSWLFTLIALIMAAVGATTWLQFLFCFSYIKLAVTL 278 HSP 2 Score: 56.6102 bits (135), Expect = 1.455e-19 Identity = 28/64 (43.75%), Postives = 43/64 (67.19%), Query Frame = 1 Query: 10 KLLGRISFVAWSVSFYPQVILNFRRKSCCGIELRFSCC*ILTKHSSYMIYNVVLFFSSTVQQQY 201 +++G I FVAWSVSFYPQVI N+RRKS G+ F L +Y ++N+ LF+ ++++Q+ Sbjct: 128 QVIGWIYFVAWSVSFYPQVITNWRRKSVVGLSFDFVVL-NLMGFVAYSVFNIGLFWVPSIKEQF 190
BLAST of CX294169 vs. ExPASy Swiss-Prot
Match: CTNS_CAEEL (Cystinosin homolog OS=Caenorhabditis elegans GN=ctns-1 PE=2 SV=2) HSP 1 Score: 56.9954 bits (136), Expect = 3.280e-14 Identity = 29/72 (40.28%), Postives = 47/72 (65.28%), Query Frame = 1 Query: 10 KLLGRISFVAWSVSFYPQVILNFRRKSCCGIELRFSCC*ILTKHSSYMIYNVVLFFSSTVQQQYFSEVRPRS 225 +++G F AWS+SFYPQ+ LNF+RKS G+ F L +Y I+N++++++S V+ +Y + V PRS Sbjct: 130 QIVGWTYFFAWSISFYPQMYLNFKRKSVVGLNFDFLSL-NLVGFCAYAIFNLLMYYNSHVKNEY-NIVNPRS 199 HSP 2 Score: 40.4318 bits (93), Expect = 3.280e-14 Identity = 20/45 (44.44%), Postives = 27/45 (60.00%), Query Frame = 2 Query: 233 PVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVV 367 PV NDV F++HA L IT+ Q YER Q VS +A++ V+ Sbjct: 202 PVLLNDVVFAVHAFLACFITILQCLFYERDNQSVSSKCIALMIVL 246
BLAST of CX294169 vs. ExPASy Swiss-Prot
Match: CTNS_DROME (Cystinosin homolog OS=Drosophila melanogaster GN=CG17119 PE=1 SV=2) HSP 1 Score: 51.2174 bits (121), Expect = 3.282e-14 Identity = 29/68 (42.65%), Postives = 41/68 (60.29%), Query Frame = 1 Query: 13 LLGRISFVAWSVSFYPQVILNFRRKSCCGIELRFSCC*ILTKHSSYMIYNVVLFFSSTVQQQYFSEVR 216 + G + FVAWSVSFYPQ+ N+RRKS G+ F I+ + Y ++N L+F +Q +Y EVR Sbjct: 134 IFGWVYFVAWSVSFYPQIWSNYRRKSVEGLNFDFLALNIV-GFTLYSMFNCGLYFIEDLQNEY--EVR 198 HSP 2 Score: 46.2098 bits (108), Expect = 3.282e-14 Identity = 27/81 (33.33%), Postives = 44/81 (54.32%), Query Frame = 2 Query: 233 PVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVALPNHS---WLWLINFFNAIQVIMTL 466 PV NDV FS+HA+ T IT+ Q Y+R Q+VS I+ I+++ A V L S WL + + + +++ +T+ Sbjct: 205 PVMLNDVVFSLHAMFATCITILQCFFYQRAQQRVSFIAYGILAI--FAVVVVVSAGLAGGSVIHWLDFLYYCSYVKLTITI 283
BLAST of CX294169 vs. ExPASy Swiss-Prot
Match: CTNS_CAEBR (Cystinosin homolog OS=Caenorhabditis briggsae GN=ctns-1 PE=3 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 3.455e-13 Identity = 29/72 (40.28%), Postives = 45/72 (62.50%), Query Frame = 1 Query: 10 KLLGRISFVAWSVSFYPQVILNFRRKSCCGIELRFSCC*ILTKHSSYMIYNVVLFFSSTVQQQYFSEVRPRS 225 +++G F AWSVSFYPQ+ LNF+RKS G+ F L +Y ++N++++++S V+ Y E PRS Sbjct: 129 QIVGWTYFAAWSVSFYPQMYLNFKRKSVVGLNFDFLSL-NLVGFGAYAMFNLLMYYNSHVKNIYSME-NPRS 198 HSP 2 Score: 38.891 bits (89), Expect = 3.455e-13 Identity = 19/46 (41.30%), Postives = 28/46 (60.87%), Query Frame = 2 Query: 233 PVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVS-KISMAIVSVV 367 PV NDV F++HA L +T+ Q YER Q++S K + I+ +V Sbjct: 201 PVLLNDVVFAVHAFLACFVTILQCIFYERDQQRISTKCIILIIGLV 246 The following BLAST results are available for this feature:
BLAST of CX294169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294169 ID=CX294169; Name=CX294169; organism=Citrus clementina; type=EST; length=466bpback to top |