CX294171

Overview
NameCX294171
Unique NameCX294171
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length524
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15502 contig Ccv1_Contig15502:74..597. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294171 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.065e-31
Identity = 75/141 (53.19%), Postives = 99/141 (70.21%), Query Frame = 2
Query:   38 MSSFHDQLMKPP--NDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQ-LSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWF 451
            M S  +  M P   +DEE  +  M+LA +S+LPM +KA IEL +LEI+AKA P   LS +++ASQLPT N EA  +LDRMLRLLASYS LTY+L T  DG V  +YGL  VC++L  NEDGVS+A + L+ ++KV V+ W+
Sbjct:    1 MGSTGETQMTPTQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPEAPVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNEDGVSIAALCLMNQDKVLVESWY 141          
BLAST of CX294171 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.391e-31
Identity = 74/141 (52.48%), Postives = 100/141 (70.92%), Query Frame = 2
Query:   38 MSSFHDQLMKPP--NDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQ-LSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWF 451
            M S  +  M P   +DEE  +  M+LA +S+LPM +KA IEL +LEI+AKA P   LS ++IASQLPT N +A  +LDRMLRLLASYS LTY+L T  DG V  +YGL  VC++L  NE+GVS+AP+ L+ ++KV ++ W+
Sbjct:    1 MGSTGETQMTPTQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLPTKNPDAPVMLDRMLRLLASYSILTYSLRTLADGKVERLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWY 141          
BLAST of CX294171 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 4.047e-31
Identity = 71/128 (55.47%), Postives = 92/128 (71.88%), Query Frame = 2
Query:   74 NDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQ--LSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWF 451
            +DEE  +  M+LA +++LPM +KA IEL VLEI+AK+ P    +S +EIA+QLPT N EA  +LDR+LRLLASYS +TY L     G V  +YGLA VC++L  NEDGVSLAP  L A +KV ++PWF
Sbjct:   17 SDEEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLTATDKVLLEPWF 144          
BLAST of CX294171 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 4.474e-30
Identity = 72/141 (51.06%), Postives = 98/141 (69.50%), Query Frame = 2
Query:   38 MSSFHDQLMKPP--NDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQ-LSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWF 451
            M S  +  M P   +DEE  +  M+LA +S+LPM +K  IEL +LEI+AKA P   LS+SEIAS LPT N +A  +LDR+LRLLASYS LT +L    DG V  +YGLA VC++L  NEDGVS++P+ L+ ++KV ++ W+
Sbjct:    1 MGSTGETQMTPTQVSDEEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWY 141          
BLAST of CX294171 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 4.474e-30
Identity = 72/141 (51.06%), Postives = 98/141 (69.50%), Query Frame = 2
Query:   38 MSSFHDQLMKPP--NDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQ-LSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWF 451
            M S  +  M P   +DEE  +  M+LA +S+LPM +K  IEL +LEI+AKA P   LS+SEIAS LPT N +A  +LDR+LRLLASYS LT +L    DG V  +YGLA VC++L  NEDGVS++P+ L+ ++KV ++ W+
Sbjct:    1 MGSTGETQMTPTQVSDEEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWY 141          
BLAST of CX294171 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.221e-29
Identity = 68/130 (52.31%), Postives = 95/130 (73.08%), Query Frame = 2
Query:   74 NDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASP----SQLSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWF 451
            +DEE  +  M+LA +S+LPM +KA IEL VLEI+AK+ P    + +S +EIA+QLPT N +A  +LDR+LRLLASYS +T +L    DG V  +YGLA VC++L  NEDGVSLAP+ L+ ++KV ++ W+
Sbjct:   17 SDEEANLFAMQLASASVLPMVLKAAIELDVLEIMAKSIPHGSGAYISPAEIAAQLPTTNPDAPVMLDRVLRLLASYSVVTCSLRELPDGKVERLYGLAPVCKFLTKNEDGVSLAPLCLMNQDKVLMESWY 146          
BLAST of CX294171 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 6.461e-29
Identity = 65/127 (51.18%), Postives = 95/127 (74.80%), Query Frame = 2
Query:   74 NDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASP-SQLSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWF 451
            +DEE  +  M+LA +S+LPM +K+ +EL +LEI+AKA P +Q+S  EIASQLPT N +A  +LDRMLRLLA Y  LT ++ T +DG V  +YGLA+V +YL+ NEDGVS++ + L+ ++KV ++ W+
Sbjct:   15 SDEEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWY 141          
BLAST of CX294171 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 6.461e-29
Identity = 66/127 (51.97%), Postives = 91/127 (71.65%), Query Frame = 2
Query:   74 NDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQ-LSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWF 451
            +DEE  +  M+LA +S+LPM +KA IEL +LEI+AKA P   LS  E+A+QLPT N EA  +LDR+ RLLASYS LT  L    DG V  +YGLA VC++L+ NEDGVS+A + L+ ++K+ ++ W+
Sbjct:   16 SDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPGEVAAQLPTQNPEAPVMLDRIFRLLASYSVLTCTLRNLPDGKVERLYGLAPVCKFLVKNEDGVSIAALNLMNQDKILMESWY 142          
BLAST of CX294171 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.102e-28
Identity = 67/139 (48.20%), Postives = 95/139 (68.35%), Query Frame = 2
Query:   38 MSSFHDQLMKPPNDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQ-LSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWF 451
            M S +  L +   ++E F+  M+LA +S+LPM +KA +EL +LEI+AK+ P   +S SE+A+QLPT N EA  +LDRM RLLA+YS L   L T  DG V  +Y LA VC++L  N DGVS+API L+ ++KV ++ W+
Sbjct:    1 MGSINQSLTQ--TEDEAFVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWY 137          
BLAST of CX294171 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 1.880e-28
Identity = 64/126 (50.79%), Postives = 91/126 (72.22%), Query Frame = 2
Query:   77 DEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASP-SQLSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWF 451
            ++E F+  M+LA +S+LPM +K+ +EL +LEI+AKA P + +S SE+A+QLPT N EA  +LDRMLRLLA+YS L   L T  DG V  +Y LA VC+ L  N DGVS+AP+ L+ ++KV ++ W+
Sbjct:   12 EDEAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWY 137          
The following BLAST results are available for this feature:
BLAST of CX294171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
COMT1_ROSCH1.065e-3153.19Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_PRUDU1.391e-3152.48Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
IEMT_CLABR4.047e-3155.47(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
COMT1_POPTM4.474e-3051.06Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_POPKI4.474e-3051.06Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_CLABR2.221e-2952.31Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_MEDSA6.461e-2951.18Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_EUCGU6.461e-2951.97Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
COMT1_CAPCH1.102e-2848.20Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_CAPAN1.880e-2850.79Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]

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Properties
Property NameValue
Genbank descriptionC05013A05SK AbsAOv1 Citrus clementina cDNA clone C05013A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294171 ID=CX294171; Name=CX294171; organism=Citrus clementina; type=EST; length=524bp
TTTGTTAATTTCAGCATATCCTACTCCGAGAATTAAGATGAGTTCATTCC
ATGACCAACTCATGAAACCACCAAACGATGAGGAAGATTTCATGCTGATC
ATGGAGCTTGCCCACAGCTCATTACTTCCGATGACCATGAAAGCTATCAT
CGAGCTTGGTGTGTTAGAGATTTTAGCTAAAGCTAGTCCATCTCAGCTTT
CTTCTTCTGAGATTGCATCTCAGCTGCCCACAAATAACCAAGAAGCCTCA
ACAGTGCTTGATCGAATGTTACGACTCCTTGCTAGTTACTCTTTCCTAAC
ATATAATCTTGTCACAAATAAAGATGGAAATGTTTGCGGAGTATATGGTT
TAGCGTCCGTTTGCAGATATTTGCTTCCAAATGAAGACGGAGTTTCTCTT
GCTCCCATTTTCCTCTTAGCTCGGGAGAAAGTTTCTGTAGATCCTTGGTT
TGTTTTCTAATTTCTCTGCGACATCTTTCATGAGTCATGAAAATTCCTTC
ATAACATTGTGAAGCACTCTTTAC
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