CX294298

Overview
NameCX294298
Unique NameCX294298
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length455
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig556 contig Ccv1_Contig556:34..487. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX294298 vs. ExPASy Swiss-Prot
Match: PR4_PHAVU (Wound-induced basic protein OS=Phaseolus vulgaris GN=PR4 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 9.793e-16
Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 1 
Query:   64 MIYDVNSPLFRSFLSQNGGASDKRKMEEQRPEEQRPKTNENNPVMTE 204
            MIYDVNSPLFRSFLSQ GG+SDKRK EEQ+P+E RPK +EN P+MTE
Sbjct:    1 MIYDVNSPLFRSFLSQKGGSSDKRKTEEQKPKEHRPKASENKPIMTE 47
The following BLAST results are available for this feature:
BLAST of CX294298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PR4_PHAVU9.793e-1678.72Wound-induced basic protein OS=Phaseolus vulgaris ... [more]
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Properties
Property NameValue
Genbank descriptionC05014G10SK AbsAOv1 Citrus clementina cDNA clone C05014G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294298 ID=CX294298; Name=CX294298; organism=Citrus clementina; type=EST; length=455bp
AAACGGAACTAGGGTTTCTTTTTCCGATGCAGGAATCCTACGGTGATAAT
TCATAATGCAACAATGATCTACGACGTGAACTCTCCTCTCTTCCGTTCCT
TCCTCAGCCAGAATGGCGGCGCTTCTGACAAGAGGAAAATGGAAGAGCAA
AGGCCTGAAGAACAAAGACCCAAAACAAATGAGAACAATCCTGTCATGAC
AGAGTGAGAGTTGCGTTTTGCTTGTAATGCTTCAGTGATGAGATATAAGT
AGTACGGTTCAGTGGTCACAGTCATCCAAATGTAACTGATTCTGATTTTC
CTTGGTTTATGGGTTTGTGGTGGTCTGTGTTTGGATTTGGATGTTTCTTG
TGGAACAAAAAATGTTTGGTAGTGCTATTATGCATTTAATATATTATTAA
GGAAGCAGTGGTGTTGTATGATAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AATTT
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