CX294307

Overview
NameCX294307
Unique NameCX294307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length528
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX294307 vs. ExPASy Swiss-Prot
Match: P2A09_ARATH (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana GN=PP2A9 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.377e-17
Identity = 50/99 (50.51%), Postives = 58/99 (58.59%), Query Frame = 2 
Query:    2 SLKADAFGWGGCPVFMMAKLGKKGKYTSRKMKPLDHL------GKEAAEIPDEK---VEILVPEQGENQ---LYFGLYEVWNGKWKGGLLIHHAFIREV 262
            S K DA GW   PVFM AK+GKKGK   +++K +         G E   IPDE     EILV     NQ   L FGLYEVW G+WK GLLIH AF++EV
Sbjct:   82 SFKPDATGWDKAPVFMSAKIGKKGKTVWKRIKSVSQNFGILKGGSEPVNIPDESDGLFEILVSPTALNQDTKLQFGLYEVWTGRWKTGLLIHEAFVQEV 180
The following BLAST results are available for this feature:
BLAST of CX294307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
P2A09_ARATH3.377e-1750.51Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionC05014H12SK AbsAOv1 Citrus clementina cDNA clone C05014H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294307 ID=CX294307; Name=CX294307; organism=Citrus clementina; type=EST; length=528bp
CTCTCTGAAAGCGGACGCCTTCGGCTGGGGCGGCTGTCCAGTTTTTATGA
TGGCTAAGCTAGGCAAGAAGGGAAAGTATACCTCGAGAAAAATGAAGCCA
CTTGATCACCTTGGAAAGGAAGCCGCTGAAATTCCTGACGAAAAGGTTGA
GATTCTGGTTCCGGAACAAGGCGAAAACCAGCTCTATTTTGGACTGTATG
AGGTATGGAATGGAAAGTGGAAGGGAGGTTTGCTAATTCACCATGCATTC
ATCAGAGAAGTGAAATAACTTACCAAAACGATTTGAGTATTGATGTTTCT
ATTAATAATTCCCGGATCATGGGCCTCCGTACTATGATTCGTAATAACTG
GACGTGGAATTAATATGAACCACAAATAAATCCCCACTTTAGTTTTGCTA
ATTTGCATGCACTGGGTGTATACAAGGGCAAATTAATGTCCGGACAAAGA
TGAAGGTAGCGTCCCCGATAATGAATTCCTAAGCTTCTATTGTTATCGGT
GGCTGCAGCCTATATACTTTTTAATGTT
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