CX294364

Overview
NameCX294364
Unique NameCX294364
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length585
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX294364_ssr345 microsatellite CX294364_ssr345:345..356. BLAST: Citrus ESTs to Prunus persica proteins V1
CX294364_ssr21 microsatellite CX294364_ssr21:21..48. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig13010 contig Ccv1_Contig13010:242..844. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294364 vs. ExPASy Swiss-Prot
Match: SAP3_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabidopsis thaliana GN=SAP3 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.666e-30
Identity = 67/127 (52.76%), Postives = 79/127 (62.20%), Query Frame = 3
Query:  180 MAEEHRCQAPRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLI---SSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXXQSTA----ANRCMTCRRRVGLTGFKCRCGSVFCGT 539
            MAEEHR Q PRLC NNCGFFGS  TQNLCSKCFRDLQ + Q SS+AKHAL Q+L    +++S  +S    P  D                  ++        RC+TCRRRVG+TGF+CRCG VFCGT
Sbjct:    1 MAEEHRLQEPRLCANNCGFFGSTATQNLCSKCFRDLQHQEQNSSTAKHALTQSLAAVGAAASSSVSPPPPPPADSKEIVEAKSEKRAAAEPEEADGPPQDPKRCLTCRRRVGITGFRCRCGFVFCGT 127          
BLAST of CX294364 vs. ExPASy Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.106e-25
Identity = 64/133 (48.12%), Postives = 77/133 (57.89%), Query Frame = 3
Query:  180 MAEEHRCQAP---RLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSA-----KHALNQTLISSSSVDLS------LRERPATDXXXXXXXXXXXXXXXXXXQSTAANRCMTCRRRVGLTGFKCRCGSVFCG 536
            MAEEHRCQ P   RLCVNNCGF GS  T NLCS C+ DL LK QQ SS+     + +L+ +  SSSS ++S      L + P+                    Q    NRC TCR+RVGLTGFKCRCG++FCG
Sbjct:    1 MAEEHRCQTPESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQSSSIKSTVESSLSVSPPSSSSSEISSPIIPPLLKNPSVKLEVPEKKAVISLPTTEQNQQQRPNRCTTCRKRVGLTGFKCRCGTMFCG 133          
BLAST of CX294364 vs. ExPASy Swiss-Prot
Match: SAP4_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.709e-23
Identity = 58/130 (44.62%), Postives = 71/130 (54.62%), Query Frame = 3
Query:  180 MAEEHRCQAP---RLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTL-------ISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXXQSTAANRCMTCRRRVGLTGFKCRCGSVFCGT 539
            MAEEHRC+ P   RLCVNNCGFFGS  T NLCS C+ DL LK QQ +S K  +  +L       + + + +L +   P T                   Q    NRC  CR+RVGLTGF CRCG+ FCG+
Sbjct:    1 MAEEHRCETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSLSPVIAPVLENYAAELEI---PTTKKTEEKKPIQIPTEQPSPPQRP--NRCTVCRKRVGLTGFMCRCGTTFCGS 125          
BLAST of CX294364 vs. ExPASy Swiss-Prot
Match: SAP1_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana GN=SAP1 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.184e-19
Identity = 45/117 (38.46%), Postives = 66/117 (56.41%), Query Frame = 3
Query:  207 PRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXXQS------TAANRCMTCRRRVGLTGFKCRCGSVFCGT 539
            P+LCV  CGFFGSP+  NLCSKC+RD++   +Q++SAK A+ ++L  +       + +  T                    +      + A RC++C ++VG+TGFKCRCGS FCGT
Sbjct:   16 PKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLNPNKPKTQPQQSQEITQGVLGSGSSSSSTRGGDSAAAPLDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGT 132          
BLAST of CX294364 vs. ExPASy Swiss-Prot
Match: SAP5_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Oryza sativa subsp. japonica GN=SAP5 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.917e-18
Identity = 55/128 (42.97%), Postives = 66/128 (51.56%), Query Frame = 3
Query:  180 MAEEHRCQ--APRLCVNNCGFFGSPTTQNLCSKCFRDLQ-------LKAQQSSSAKHALNQTLISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXXQSTAANRCMTCRRRVGLTGFKCRCGSVFCG 536
            MAEE R Q    RLC NNCGFFGSP T +LCSKC+RD Q       +    ++SA  A + +  SSSS    L    A +                      A+RC +CR+RVGLTGF CRCG  FCG
Sbjct:    1 MAEEQRWQEGCHRLCANNCGFFGSPATLDLCSKCYRDRQGRESTAPVVVAAAASACPATHPSSPSSSSCPAFLPSSTAAEAGVVVAAV------------AKASRCASCRKRVGLTGFACRCGGTFCG 116          
BLAST of CX294364 vs. ExPASy Swiss-Prot
Match: SAP2_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana GN=SAP2 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 4.975e-18
Identity = 47/125 (37.60%), Postives = 65/125 (52.00%), Query Frame = 3
Query:  201 QAPRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSS---------VDL---SLRERPATDXXXXXXXXXXXXXXXXXXQSTAANRCMTCRRRVGLTGFKCRCGSVFCGT 539
            + P+LC NNCGFFGS  T N+CSKC +D+  + +Q +    A++ T  SS+          VD+   S+     +                   +    +RC TC +RVGLTGFKCRCGS+FCGT
Sbjct:   13 EGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSGTSSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCNKRVGLTGFKCRCGSLFCGT 137          
BLAST of CX294364 vs. ExPASy Swiss-Prot
Match: SAP6_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.891e-17
Identity = 53/122 (43.44%), Postives = 68/122 (55.74%), Query Frame = 3
Query:  177 KMAEE---HRCQAPRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXXQSTAANRCMTCRRRVGLTGFKCRCGSVFC 533
            K AEE   H  +AP LCVNNCGFFGS  T+N+CSKC+RD  +KA+  ++      + L S SS  L       TD                  +   +NRC++CR++VGLTGFKCRCG  FC
Sbjct:    8 KEAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRD-TVKAKTVATVVE--KKPLASLSSTPLVTE---VTDGGSGSVADGKQVMEEDTPK-PPSNRCLSCRKKVGLTGFKCRCGGTFC 122          
BLAST of CX294364 vs. ExPASy Swiss-Prot
Match: SAP9_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.469e-17
Identity = 47/116 (40.52%), Postives = 59/116 (50.86%), Query Frame = 3
Query:  192 HRCQAPRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXXQSTAANRCMTCRRRVGLTGFKCRCGSVFCGT 539
            H  +AP LCVNNCGFFGS  T N+CSKC+RD       ++        T  SSS   L     PA                    +   +NRC++CR++VGLTGF+CRCG  FC T
Sbjct:   15 HTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFVKVTTMAAPVVEKKAFTPASSSKTPL----EPAKPDEVPAAAVEDKQAAQEPPK-PPSNRCLSCRKKVGLTGFQCRCGGTFCST 125          
BLAST of CX294364 vs. ExPASy Swiss-Prot
Match: SAP9_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Arabidopsis thaliana GN=SAP9 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 9.383e-17
Identity = 43/127 (33.86%), Postives = 62/127 (48.82%), Query Frame = 3
Query:  189 EHRCQAPRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXXQSTA-----------ANRCMTCRRRVGLTGFKCRCGSVFCG 536
            + +   P+LCV  CGFFGSP+  +LCSKC+R +  +  Q++ AK A+ ++   S    L + E PA                     S              NRC+ C ++VG+ GFKC+CGS FCG
Sbjct:   13 QSQASEPKLCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAVEKSFKPSPPRSLFIAEPPAVVVEPKPEKAAVVVVSAEPSSSAVPEANEPSRPARTNRCLCCNKKVGIMGFKCKCGSTFCG 139          
BLAST of CX294364 vs. ExPASy Swiss-Prot
Match: SAP12_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 12 OS=Oryza sativa subsp. japonica GN=SAP12 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.943e-16
Identity = 45/113 (39.82%), Postives = 62/113 (54.87%), Query Frame = 3
Query:  213 LCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXXQSTAA----NRCMTCRRRVGLTGFKCRCGSVFCGT 539
            LC + CGFFGS  T N+CSKC+RD  LKA   +S   + + +  ++S+ D+++   PAT                    S AA    NRC+ CR++VGL GF+CRCG  FC T
Sbjct:   80 LCSSGCGFFGSKETNNMCSKCYRD-HLKA---TSPLFSSSSSPATASTTDITVPIAPATTAPTPSLKGKEEEATAAASSSAAAAAKPNRCVACRKKVGLLGFECRCGGTFCST 188          
The following BLAST results are available for this feature:
BLAST of CX294364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
SAP3_ARATH5.666e-3052.76Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ARATH1.106e-2548.12Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ARATH6.709e-2344.62Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ARATH1.184e-1938.46Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP5_ORYSJ2.917e-1842.97Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP2_ARATH4.975e-1837.60Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ORYSJ1.891e-1743.44Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP9_ORYSJ2.469e-1740.52Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP9_ARATH9.383e-1733.86Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP12_ORYSJ7.943e-1639.82Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionC05015G05SK FlavSen1 Citrus clementina cDNA clone C05015G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294364 ID=CX294364; Name=CX294364; organism=Citrus clementina; type=EST; length=585bp
GGGCTGCAGGCCTCGTGCCGTCTTTCTTTCTTTCTTTCTTTCTTTCTTAC
CAAAATCCCAATTACCAAACAGAAGACAAAGGCTAATCCTCCTTATATAT
TTCCTTTCCAGTCGTCCCTTTTTGAAAAATCAATCAATTTCAGCAAATTA
TTCCTGAAAATATTGTTTACAGGTTGAAGATGGCGGAAGAGCACAGATGT
CAAGCACCCCGTTTGTGCGTGAACAACTGCGGATTTTTCGGGAGCCCAAC
AACTCAAAATCTCTGCTCCAAATGTTTTCGCGATCTTCAGTTGAAAGCAC
AACAATCTTCCTCGGCCAAACACGCCCTTAACCAAACCCTGATTTCGTCG
TCGTCGGTTGATTTGTCTCTGCGCGAGAGACCGGCGACGGACGTGGAGGT
AGCGGCAGAGGCGGAGAAGCCGCCGGCTGAGGTGGCCGCTCCGGTGCAGT
CGACGGCGGCGAACAGGTGCATGACTTGCAGGAGGCGCGTGGGGCTCACG
GGGTTCAAGTGCAGGTGCGGGTCGGTGTTCTGCGGGACCACAGGTACCCG
GAGCGCACGCGTGTTCGTTCATTCAAGAGATGGCA
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