CX294542

Overview
NameCX294542
Unique NameCX294542
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length270
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9703 contig Ccv1_Contig9703:133..402. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX294542 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.867e-12
Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 1 
Query:   19 RGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 162
            +GSSY AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:   19 KGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64
The following BLAST results are available for this feature:
BLAST of CX294542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MT3_CARPA8.867e-1260.42Metallothionein-like protein type 3 OS=Carica papa... [more]
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Properties
Property NameValue
Genbank descriptionC05054A01SK FlavRip1 Citrus clementina cDNA clone C05054A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294542 ID=CX294542; Name=CX294542; organism=Citrus clementina; type=EST; length=270bp
CTCGTGCCGAATTCGGCACGAGGAAGCAGCTATGCTGCTGACTTCGTCGA
GACTGACTTGAGCTTTGTCAGCACCGTTGTTGTCATGGACGTTCAGGCTG
CTGAGGCTGAAGGTAACTGCAAGTGCGGCCCCACCTGCGCTTGTGTGAAC
TGCACTTGTGGTAGTCACTAATAAGCAAACACATGCAGCAAAAAATAAGA
AGCTGCAAGTGTGCCTAAATATTGTGGGGGTTAAGAATAATGTAAGGGTG
ATTAAAAAAAAAAAAAAAAA
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