CX294546

Overview
NameCX294546
Unique NameCX294546
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.450e-33
Identity = 82/224 (36.61%), Postives = 127/224 (56.70%), Query Frame = 3
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDLGXXXXXXXXXXXXXFGQTCDWIKKRLG-DKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEML--GMNLQGKWSVPDA-AEVQHPTATQSQTSQLTKLR-------WSSQQKPVVRNEE 641
            P+DE  +Q L  Y++K F ++SKE L +G             F +   W K  L  + V  V+ISNRL+ +PCV+V++KFGWSANMER+M++QT+ D +   +MRG+RV EINP HPII+ L     + P+D        L+Y  AL+ SGF   +P +  ++IY  +  G+N+      PDA A+ +   A + +TS+ T+ +        + + +PV + EE
Sbjct:  601 PVDEYLMQYLMDYEDKKFQNVSKEGLKVGKDSKDKELKEA--FKELTKWWKGNLASENVDDVKISNRLADTPCVVVTSKFGWSANMERIMQSQTLSDANKQAYMRGKRVLEINPRHPIIKELKDRIASDPEDESVKETAQLMYQTALIESGFILTDPKDFAARIYNSVKSGLNIS-----PDAVADEEIEAAEEPETSEATETKSDDLAGGLNIEAEPVEQQEE 817          
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.197e-33
Identity = 75/198 (37.88%), Postives = 115/198 (58.08%), Query Frame = 3
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDLGXXXXXXXXXXXXXFGQTCDWIKKRLGDK-VASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEML--GMNLQGKWSVPDAAEVQHPTATQSQTSQ 587
            P+DE  +Q L  Y++K F ++SKE L LG             F +  DW KK L  + + SV+ISNRL ++PCV+V++K+GWS+NME++M+AQT+ D S   +MRG+RV EINP HPII+ L        D     +   L+Y  AL+ SGF   +P +  S IY  +   ++L    +V +  EV+ P   + ++++
Sbjct:  598 PVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDSKLKDLKES--FKELTDWWKKALDTEGIDSVKISNRLHNTPCVVVTSKYGWSSNMEKIMQAQTLSDASKQAYMRGKRVLEINPRHPIIKELRDKVAQDSDSEGLKQTARLVYQTALMESGFNLPDPKDFASSIYRSVQKSLDLSPDAAVEEEEEVEEPEVEEKESAK 793          
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HSP83_DROME (Heat shock protein 83 OS=Drosophila melanogaster GN=Hsp83 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.572e-32
Identity = 71/173 (41.04%), Postives = 106/173 (61.27%), Query Frame = 3
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDL--GXXXXXXXXXXXXXFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 515
            PIDE  +Q+LK YK K  V ++KE L+L                F   C  +K  L +KV  V +SNRL  SPC +V+++FGWSANMER+MKAQ + DT++M +M G++  EINP+HPI++ L   +    +D     +V LL++ +L+SSGF+ ++P    S+IY M+ + L
Sbjct:  509 PIDEYVIQHLKEYKGKQLVSVTKEGLELPEDESEKKKREEDKAKFESLCKLMKSILDNKVEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVETLRQKADADKNDKAVKDLVILLFETSLLSSGFSLDSPQVHASRIYRMIKLGL 681          
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HSP83_DROPS (Heat shock protein 83 OS=Drosophila pseudoobscura pseudoobscura GN=Hsp83 PE=3 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.039e-31
Identity = 74/187 (39.57%), Postives = 108/187 (57.75%), Query Frame = 3
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDL--GXXXXXXXXXXXXXFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNLQGKWSVPDAAEVQH 557
            PIDE  +Q+LK YK K  V ++KE L+L                F   C  +K  L  KV  V +SNRL  SPC +V+++FGWSANMER+MKAQ + DT++M +M G++  EINP+HPI++ L   +    +D     +V LL++ +L+SSGF+ ++P    S+IY M+ + L      P   E  H
Sbjct:  509 PIDEYVIQHLKEYKGKQLVSVTKEGLELPEDEAEKKKREEDKAKFEGLCKLMKSILDSKVEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVEALRQKADADKNDKAVKDLVILLFETSLLSSGFSLDSPQVHASRIYRMIKLGLGIDEDEPMTTEDAH 695          
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HSP83_DROAV (Heat shock protein 83 OS=Drosophila auraria GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.773e-31
Identity = 70/173 (40.46%), Postives = 105/173 (60.69%), Query Frame = 3
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDL--GXXXXXXXXXXXXXFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 515
            PIDE  +Q+LK YK K  V ++KE L+L                F   C  +   L +KV  V +SNRL  SPC +V+++FGWSANMER+MKAQ + DT++M +M G++  EINP+HPI++ L   +    +D     +V LL++ +L+SSGF+ ++P    S+IY M+ + L
Sbjct:  508 PIDEYVIQHLKEYKGKQLVSVTKEGLELPEDDAEKKKREEDKAKFESLCKLMNAILDNKVEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVETLRQKADADKNDKAVKDLVILLFETSLLSSGFSLDSPQVHASRIYRMIKLGL 680          
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HSP83_ANOGA (Heat shock protein 83 OS=Anopheles gambiae GN=Hsp83 PE=3 SV=3)

HSP 1 Score: 135.191 bits (339), Expect = 3.024e-31
Identity = 71/173 (41.04%), Postives = 103/173 (59.54%), Query Frame = 3
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDL--GXXXXXXXXXXXXXFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 515
            PIDE  +Q LK YK K  V ++KE L+L                F   C  +K  L  KV  V +SNRL  SPC +V++++GWSANMER+MKAQ + D+S+M +M G++  EINP+H II+ L   ++   +D     +V LL++ AL+SSGF+ + P    S+IY M+ + L
Sbjct:  504 PIDEYVIQQLKEYKGKQLVSVTKEGLELPEDEAEKKKREEDKAKFENLCKVMKSVLESKVEKVMVSNRLVDSPCCIVTSQYGWSANMERIMKAQALRDSSAMGYMAGKKHLEINPDHAIIETLRQRAEADKNDKAVKDLVILLFETALLSSGFSLDEPGTHASRIYRMIKLGL 676          
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: ENPL_CATRO (Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.157e-31
Identity = 69/173 (39.88%), Postives = 103/173 (59.54%), Query Frame = 3
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDLGXXXXXXXXXXXXXFGQTCDWIKKRLG-DKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNLQ 518
            P+DE  +Q L  Y++K F ++SKE L +G             F +   W K  L  + V  V+ISNRL+++PCV+V++K+GWS+NMER+M++QT+ D S   +MRG+RV EINP HPII+ L        +D    +   L+Y  AL+ SGF   +P E  S IY+ +  +L+
Sbjct:  605 PVDEYLMQYLMDYEDKKFQNVSKEGLKIGKDSKDKELKES--FKELTKWWKGALASENVDDVKISNRLANTPCVVVTSKYGWSSNMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDAEDESVKQTARLMYQTALMESGFMLNDPKEFASSIYDSVKSSLK 775          
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HSP90_THEAN (Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.960e-30
Identity = 74/183 (40.44%), Postives = 104/183 (56.83%), Query Frame = 3
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDL--GXXXXXXXXXXXXXFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEM--LGMNLQGKWSVPD 539
            PIDE AVQ +K ++ K     +KE L+L  G                 C  IK+ L DKV  V    R + SPC LV+++FGWSANMER+MKAQ + D+S   +M  +++ EINP H I++ L A + N   D     +V LLYD AL++SGF  + P + G++IY M  LG++L  +  V D
Sbjct:  520 PIDEYAVQQIKEFEGKKLKCCTKEGLELDEGEDEKKSFEALKEEMEPLCKHIKEVLHDKVEKVVCGTRFTDSPCALVTSEFGWSANMERIMKAQALRDSSITSYMLSKKIMEINPRHSIMKELKARAANDKTDKTVKDLVWLLYDTALLTSGFNLDEPTQFGNRIYRMIKLGLSLDDEEHVED 702          
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HS90B_RAT (Heat shock protein HSP 90-beta OS=Rattus norvegicus GN=Hsp90ab1 PE=1 SV=4)

HSP 1 Score: 132.494 bits (332), Expect = 1.960e-30
Identity = 70/173 (40.46%), Postives = 104/173 (60.12%), Query Frame = 3
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDL--GXXXXXXXXXXXXXFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 515
            PIDE  VQ LK +  K+ V ++KE L+L                F   C  +K+ L  KV  V ISNRL SSPC +V++ +GW+ANMER+MKAQ + D S+M +M  ++  EINP+HPI++ L   ++   +D     +V LL++ AL+SSGF+ E+P    ++IY M+ + L
Sbjct:  516 PIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGL 688          
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HS90B_PONAB (Heat shock protein HSP 90-beta OS=Pongo abelii GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.960e-30
Identity = 70/173 (40.46%), Postives = 104/173 (60.12%), Query Frame = 3
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDL--GXXXXXXXXXXXXXFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 515
            PIDE  VQ LK +  K+ V ++KE L+L                F   C  +K+ L  KV  V ISNRL SSPC +V++ +GW+ANMER+MKAQ + D S+M +M  ++  EINP+HPI++ L   ++   +D     +V LL++ AL+SSGF+ E+P    ++IY M+ + L
Sbjct:  516 PIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEEVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGL 688          
The following BLAST results are available for this feature:
BLAST of CX294546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
ENPL_ARATH1.450e-3336.61Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]
ENPL_HORVU7.197e-3337.88Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]
HSP83_DROME3.572e-3241.04Heat shock protein 83 OS=Drosophila melanogaster G... [more]
HSP83_DROPS1.039e-3139.57Heat shock protein 83 OS=Drosophila pseudoobscura ... [more]
HSP83_DROAV1.773e-3140.46Heat shock protein 83 OS=Drosophila auraria GN=Hsp... [more]
HSP83_ANOGA3.024e-3141.04Heat shock protein 83 OS=Anopheles gambiae GN=Hsp8... [more]
ENPL_CATRO5.157e-3139.88Endoplasmin homolog OS=Catharanthus roseus GN=HSP9... [more]
HSP90_THEAN1.960e-3040.44Heat shock protein 90 OS=Theileria annulata GN=TA1... [more]
HS90B_RAT1.960e-3040.46Heat shock protein HSP 90-beta OS=Rattus norvegicu... [more]
HS90B_PONAB1.960e-3040.46Heat shock protein HSP 90-beta OS=Pongo abelii GN=... [more]

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Properties
Property NameValue
Genbank descriptionC05054A06SK FlavRip1 Citrus clementina cDNA clone C05054A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294546 ID=CX294546; Name=CX294546; organism=Citrus clementina; type=EST; length=673bp
ATCCCATCGATGAGATTGCGGTCCAGAACCTGAAATCGTATAAGGAGAAG
AATTTTGTCGACATTAGCAAGGAAGACTTGGATTTAGGTGAAAAGAATGA
GGAAAAAGAGAAGGTGATGAAGGAAGAGTTTGGCCAAACTTGTGATTGGA
TTAAGAAGCGATTGGGTGACAAAGTAGCTAGTGTTCAAATCTCAAATCGT
CTGAGCTCATCACCCTGTGTTCTGGTTTCTGCTAAGTTTGGTTGGTCAGC
CAACATGGAGAGGTTAATGAAGGCTCAAACAGTTGGTGATACCTCAAGTA
TGGAGTTCATGAGAGGAAGAAGAGTGTTTGAGATTAATCCTGAACACCCC
ATCATTCAAAACCTGAATGCTGCAAGCAAAAATTGCCCGGATGACAATGA
TGCCCTTCGAGTTGTAGATTTATTGTATGATGCAGCTCTGGTCTCTAGTG
GATTTACTCCTGAGAATCCGGCAGAGCTTGGCAGCAAGATATATGAAATG
TTAGGCATGAATTTACAAGGTAAATGGTCAGTTCCAGATGCTGCTGAGGT
TCAGCATCCAACAGCAACCCAATCACAGACCTCCCAACTTACGAAGCTGA
GGTGGTCGAGCCAGCAGAAGCCGGTGGTCAGAAATGAGGAGCTCACATTT
TTCCTTTTTCTGTCCTTATTTAG
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