CX294583
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_HELAN (40S ribosomal protein S3a OS=Helianthus annuus GN=RPS3A PE=2 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 6.297e-43 Identity = 89/104 (85.58%), Postives = 96/104 (92.31%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPMPEAPTEVIGA 312 +SQI+QIRRKMREIMV QA +CDLK LV+KFI E IGREIEKATSSIYPLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVGVK+DRPA+E PEA TEVIGA Sbjct: 158 SSQIKQIRRKMREIMVTQAQTCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLDRPAEEAAPEA-TEVIGA 260
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A1_VITVI (40S ribosomal protein S3a-1 OS=Vitis vinifera GN=GSVIVT00020038001 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.074e-42 Identity = 87/104 (83.65%), Postives = 93/104 (89.42%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPMPEAPTEVIGA 312 +SQIRQIRRKMREIM A SCDLK LV+KFI E IGREIEKATSSIYPLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVG K++RPADEP+ E TEVIGA Sbjct: 158 SSQIRQIRRKMREIMTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKLERPADEPVAEGVTEVIGA 261
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A2_ARATH (40S ribosomal protein S3a-2 OS=Arabidopsis thaliana GN=RPS3AB PE=2 SV=3) HSP 1 Score: 170.629 bits (431), Expect = 4.082e-42 Identity = 88/105 (83.81%), Postives = 93/105 (88.57%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPMPEAPTEVIGA 312 +SQIRQIRRKM EIMV +A+SCDLK LV KFI E IGREIEKAT IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY +EDVGVKVDRPADE M E PTE+IGA Sbjct: 158 SSQIRQIRRKMSEIMVKEASSCDLKELVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDVGVKVDRPADETMVEEPTEIIGA 262
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A1_ARATH (40S ribosomal protein S3a-1 OS=Arabidopsis thaliana GN=RPS3AA PE=1 SV=3) HSP 1 Score: 169.088 bits (427), Expect = 1.188e-41 Identity = 87/105 (82.86%), Postives = 93/105 (88.57%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPMPEAPTEVIGA 312 +SQIRQIRRKMR+IMV +A+SCDLK LV KFI E IGREIEKAT IYPLQNVFIRKVKILKAPKFDLGKLM+VHGDYS EDVGVKVDRPADE E PTE+IGA Sbjct: 158 SSQIRQIRRKMRDIMVREASSCDLKDLVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMDVHGDYSAEDVGVKVDRPADEMAVEEPTEIIGA 262
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_CICAR (40S ribosomal protein S3a OS=Cicer arietinum PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.026e-41 Identity = 84/104 (80.77%), Postives = 92/104 (88.46%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPMPEAPTEVIGA 312 +SQIRQIRRKMREIMV QA SCDLK LV KFI E+IG+EIEKATSSIYPLQNVFIRKVKILK+PKFDLGKLMEVHGDYSEDVG KV+ PADE + E E++GA Sbjct: 158 SSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKSPKFDLGKLMEVHGDYSEDVGTKVESPADETVVEGTPEIVGA 261
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_CATRO (40S ribosomal protein S3a OS=Catharanthus roseus GN=RPS3A PE=2 SV=4) HSP 1 Score: 166.777 bits (421), Expect = 5.894e-41 Identity = 88/105 (83.81%), Postives = 95/105 (90.48%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVDRPADEPMPEAPTEVIGA 312 +SQIRQIRRKMREIMV QA SCDLK LV+KFI E IGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+E D+G K+DRPA+E + E PTEVIGA Sbjct: 158 SSQIRQIRRKMREIMVNQAQSCDLKDLVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNEDDIGTKLDRPAEEAVAE-PTEVIGA 261
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_DAUCA (40S ribosomal protein S3a OS=Daucus carota GN=cyc07 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.240e-40 Identity = 84/104 (80.77%), Postives = 92/104 (88.46%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPMPEAPTEVIGA 312 +SQIRQIRRKM EIM QA+SCDLK LV KFI E IGREIEKATSSI+PLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVGVK++RP +E M E TEV+GA Sbjct: 158 SSQIRQIRRKMVEIMRNQASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLERPIEETMVEGETEVVGA 261
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_TOBAC (40S ribosomal protein S3a OS=Nicotiana tabacum GN=cyc07 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 3.820e-40 Identity = 84/104 (80.77%), Postives = 92/104 (88.46%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPMPEAPTEVIGA 312 +SQIRQIRRKM EIM QA+SCDLK LV KFI E IGREIEKATSSI+PLQNV+IRKVKILKAPKFD+GKLMEVHGDYSEDVGVK+DRPADE + EA E+ GA Sbjct: 158 SSQIRQIRRKMVEIMRNQASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVYIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLDRPADETVAEAEPEIPGA 261
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_BRARA (40S ribosomal protein S3a OS=Brassica rapa GN=RPS3A PE=2 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 5.163e-37 Identity = 83/106 (78.30%), Postives = 92/106 (86.79%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQ-AASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPMPEAPTEVIGA 312 +SQIRQIR KMREIM+ + A+SCDLK LV KFI E IG++IEKAT IYPLQNVFIRKVKILKAPKFDL KLMEVHGDY +EDVGVKVDRPADE + E PTE+IGA Sbjct: 158 SSQIRQIRSKMREIMIKEEASSCDLKELVAKFIPESIGKDIEKATQGIYPLQNVFIRKVKILKAPKFDLRKLMEVHGDYTAEDVGVKVDRPADE-VVEEPTEIIGA 262
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_ORYSJ (40S ribosomal protein S3a OS=Oryza sativa subsp. japonica GN=RPS3A PE=2 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 9.738e-36 Identity = 75/92 (81.52%), Postives = 84/92 (91.30%), Query Frame = 1 Query: 4 SQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 276 SQIRQIRRKM EIM QA+SCDLK LV KFI EVIG+EIEKATSSI+PLQNVF+RKVKILKAPKFDLGKLMEVHGDY+ ED+G K+DRPA++ Sbjct: 159 SQIRQIRRKMVEIMANQASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGDYAKEDIGTKLDRPAED 250 The following BLAST results are available for this feature:
BLAST of CX294583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294583 ID=CX294583; Name=CX294583; organism=Citrus clementina; type=EST; length=531bpback to top |