CX294590
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI1_ARATH (Isopentenyl-diphosphate Delta-isomerase I OS=Arabidopsis thaliana GN=IPP1 PE=2 SV=2) HSP 1 Score: 248.054 bits (632), Expect = 1.113e-65 Identity = 120/139 (86.33%), Postives = 124/139 (89.21%), Query Frame = 2 Query: 11 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASSDGTWVEHELDYLLFIVRDASFTPN 427 NDRVVGH+ KYNCHLMEKIE+ NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELIEEN LGVRNAAQRKL DEL I AEDVPVDEFTPLGR+LY A SDG W EHE+DYLLFIVRD PN Sbjct: 28 NDRVVGHDTKYNCHLMEKIEAENLLHRAFSVFLFNSKYELLLQQRSKTKVTFPLVWTNTCCSHPLYRESELIEENVLGVRNAAQRKLFDELGIVAEDVPVDEFTPLGRMLYKAPSDGKWGEHEVDYLLFIVRDVKLQPN 166
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI2_ARATH (Isopentenyl-diphosphate Delta-isomerase II OS=Arabidopsis thaliana GN=IPP2 PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 2.479e-65 Identity = 119/138 (86.23%), Postives = 125/138 (90.58%), Query Frame = 2 Query: 14 DRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASSDGTWVEHELDYLLFIVRDASFTPN 427 DRVVGH++KYNCHLME IE+ NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI++NALGVRNAAQRKLLDEL I AEDVPVDEFTPLGR+LY A SDG W EHELDYLLFIVRD PN Sbjct: 80 DRVVGHDSKYNCHLMENIEAKNLLHRAFSVFLFNSKYELLLQQRSNTKVTFPLVWTNTCCSHPLYRESELIQDNALGVRNAAQRKLLDELGIVAEDVPVDEFTPLGRMLYKAPSDGKWGEHELDYLLFIVRDVKVQPN 217
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI1_CAMAC (Isopentenyl-diphosphate Delta-isomerase I OS=Camptotheca acuminata GN=IPI1 PE=2 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 3.237e-65 Identity = 120/139 (86.33%), Postives = 124/139 (89.21%), Query Frame = 2 Query: 11 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASSDGTWVEHELDYLLFIVRDASFTPN 427 ND VVGH+ KYNCHLMEKIES NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+ENALG RNAAQRKLLDEL I AEDVPVD+F PLGRILY A SDG W EHELDYLLFIVRD + PN Sbjct: 29 NDNVVGHDTKYNCHLMEKIESENLLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIKENALGARNAAQRKLLDELGIPAEDVPVDQFIPLGRILYKAPSDGKWGEHELDYLLFIVRDVNVNPN 167
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI1_CLABR (Isopentenyl-diphosphate Delta-isomerase I OS=Clarkia breweri GN=IPI1 PE=2 SV=2) HSP 1 Score: 245.358 bits (625), Expect = 7.212e-65 Identity = 118/139 (84.89%), Postives = 125/139 (89.93%), Query Frame = 2 Query: 11 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASSDGTWVEHELDYLLFIVRDASFTPN 427 ND+VVGHE+KYNCHLMEKIES NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+EN LGVRNAAQRKLLDEL I AED+PVD+F PL RILY A SDG W EHELDYLLFI+RD + PN Sbjct: 82 NDKVVGHESKYNCHLMEKIESENLLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENCLGVRNAAQRKLLDELGIPAEDLPVDQFIPLSRILYKAPSDGKWGEHELDYLLFIIRDVNLDPN 220
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI2_CAMAC (Isopentenyl-diphosphate Delta-isomerase II OS=Camptotheca acuminata GN=IPI2 PE=2 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 3.579e-64 Identity = 117/139 (84.17%), Postives = 124/139 (89.21%), Query Frame = 2 Query: 11 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASSDGTWVEHELDYLLFIVRDASFTPN 427 ND VVGH+ KYNCHLMEKIES NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHP YRESEL++ENALGVRNAAQRKLLDEL I AEDVPVD+F PLGR+LY A SDG W EHELDYLLFI+RD + PN Sbjct: 103 NDHVVGHDTKYNCHLMEKIESDNLLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPRYRESELVDENALGVRNAAQRKLLDELGIPAEDVPVDQFIPLGRMLYKAPSDGKWGEHELDYLLFIIRDVNVHPN 241
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI2_CLABR (Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia breweri GN=IPI2 PE=3 SV=2) HSP 1 Score: 240.736 bits (613), Expect = 1.776e-63 Identity = 117/138 (84.78%), Postives = 124/138 (89.86%), Query Frame = 2 Query: 14 DRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASSDGTWVEHELDYLLFIVRDASFTPN 427 DRVVGHE+KYNCH+ EKIES N+LHRAFSVFLFNSK+ELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+EN LGVRNAAQRKLLDEL I AEDVPVDEFTPL R+LY A SDG W EHELDYLLFIVRD + PN Sbjct: 82 DRVVGHESKYNCHMWEKIESGNMLHRAFSVFLFNSKFELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENNLGVRNAAQRKLLDELGIPAEDVPVDEFTPLSRMLYKAPSDGKWGEHELDYLLFIVRDVAVHPN 219
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI2_CLAXA (Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia xantiana GN=IPI2 PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 4.375e-62 Identity = 115/138 (83.33%), Postives = 122/138 (88.41%), Query Frame = 2 Query: 14 DRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASSDGTWVEHELDYLLFIVRDASFTPN 427 D VVGHE+KYNCHL EKIES N+LHRAF+VFLFNSK+ELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+EN LGVRNAAQRKLLDEL I AEDVPVDEFTP+ R+LY A SDG W EHELDYLLFIVRD PN Sbjct: 86 DCVVGHESKYNCHLWEKIESGNMLHRAFTVFLFNSKFELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENNLGVRNAAQRKLLDELGIPAEDVPVDEFTPVSRMLYKAPSDGKWGEHELDYLLFIVRDVGIHPN 223
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI1_MACFA (Isopentenyl-diphosphate Delta-isomerase 1 OS=Macaca fascicularis GN=IDI1 PE=2 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 1.159e-38 Identity = 81/139 (58.27%), Postives = 98/139 (70.50%), Query Frame = 2 Query: 11 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASSDGTWVEHELDYLLFIVRDASFTPN 427 ND +G E K NCHL E IE LLHRAFSVFLFN++ +LLLQQRS K+TFP +TNTCCSHPL EL E +ALGVR AAQR+L EL I E+VP +E L RI Y A SDG W EHE+DY+LF+ ++ + P+ Sbjct: 27 NDNKIGAETKKNCHLNENIEK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPGELEENDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILFVRKNVTLNPD 164
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI1_HUMAN (Isopentenyl-diphosphate Delta-isomerase 1 OS=Homo sapiens GN=IDI1 PE=1 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 4.406e-38 Identity = 80/139 (57.55%), Postives = 98/139 (70.50%), Query Frame = 2 Query: 11 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASSDGTWVEHELDYLLFIVRDASFTPN 427 ND +G E K NCHL E IE LLHRAFSVFLFN++ +LLLQQRS K+TFP +TNTCCSHPL +EL E +ALGVR AAQR+L EL I E+VP +E L RI Y A SDG W EHE+DY+L + ++ + P+ Sbjct: 27 NDNKIGAETKKNCHLNENIEK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRKNVTLNPD 164
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI1_BOVIN (Isopentenyl-diphosphate Delta-isomerase 1 OS=Bos taurus GN=IDI1 PE=2 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 5.754e-38 Identity = 80/139 (57.55%), Postives = 98/139 (70.50%), Query Frame = 2 Query: 11 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASSDGTWVEHELDYLLFIVRDASFTPN 427 NDR +G E K NCHL E IE LLHRAFSVFLFN++ +LLLQQRS K+TFP +TNTCCSHPL SEL E +A+GVR AAQR+L EL I E+VP +E L RI Y A SD W EHE+DY+L + ++ + P+ Sbjct: 27 NDRRIGAETKKNCHLNENIER-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPSELEENDAIGVRRAAQRRLKAELGIPMEEVPPEEINYLTRIHYKAQSDSIWGEHEIDYILLVKKNVTLNPD 164 The following BLAST results are available for this feature:
BLAST of CX294590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294590 ID=CX294590; Name=CX294590; organism=Citrus clementina; type=EST; length=427bpback to top |