CX294739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294739 vs. ExPASy Swiss-Prot
Match: SYP22_ARATH (Syntaxin-22 OS=Arabidopsis thaliana GN=SYP22 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.597e-33 Identity = 90/191 (47.12%), Postives = 108/191 (56.54%), Query Frame = 1 Query: 40 MSFQDLQNGXXXXXXXXXXXXX---QAVAAGIFQINTAVAAFRRLVDAIGTSKDTLDHRQKLHNTRQRILQLVKDTSAKLKSVSESDRDADVNQNKKVEDAKLARDFQTVLQEFQKIQQLASEREXXXXXXXXXXXXXXXXXXXXXXGDHVGSENQPFLMEQKRQELFLLDXXXXXXXXXXXXXXHGLREI 603 MSFQDL++G QAVA+GIFQINT V+ F+RLV+ +GT KDT + R+KLH TR I QLVKDTSAKLK SE+D + VN +KK+ DAKLARDFQ VL+EFQK QQ A+ERE D V E + L E KRQEL LLD G++EI Sbjct: 1 MSFQDLESGRGRSTRKFNGGRQDSTQAVASGIFQINTGVSTFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSAKLKEASETDHQSGVNPSKKIADAKLARDFQAVLKEFQKAQQTAAERETTYTPFVPQSALPSSYTAGEV--DKV-PEQRAQLQESKRQELVLLDNEIAFNEAVIEEREQGIQEI 188
BLAST of CX294739 vs. ExPASy Swiss-Prot
Match: SYP23_ARATH (Syntaxin-23 OS=Arabidopsis thaliana GN=SYP23 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.669e-32 Identity = 89/199 (44.72%), Postives = 108/199 (54.27%), Query Frame = 1 Query: 40 MSFQDLQNGXXXXXXXXXXXXX--------QAVAAGIFQINTAVAAFRRLVDAIGTSKDTLDHRQKLHNTRQRILQLVKDTSAKLKSVSESDRDADVNQNKKVEDAKLARDFQTVLQEFQKIQQLASERE--XXXXXXXXXXXXXXXXXXXXXXGDHVGSENQPFLMEQKRQELFLLDXXXXXXXXXXXXXXHGLREIE 606 MSFQDL+ G Q VA+GIFQINT+V+ F RLV+ +GT KDT + R+KLH TR I QLVKDTSAKLK SE+D VNQ KK+ DAKLA+DFQ VL+EFQK Q+LA+ERE GD E + L+E KRQEL LLD G++EI+ Sbjct: 1 MSFQDLEAGRGRSLASSRNINGGGSRQDTTQDVASGIFQINTSVSTFHRLVNTLGTPKDTPELREKLHKTRLYIGQLVKDTSAKLKEASETDHQRGVNQKKKIVDAKLAKDFQAVLKEFQKAQRLAAERETVYAPLVHKPSLPSSYTSSEIDVNGDK-HPEQRALLVESKRQELVLLDNEIAFNEAVIEEREQGIQEIQ 198
BLAST of CX294739 vs. ExPASy Swiss-Prot
Match: SYP21_ARATH (Syntaxin-21 OS=Arabidopsis thaliana GN=SYP21 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 8.114e-30 Identity = 83/200 (41.50%), Postives = 107/200 (53.50%), Query Frame = 1 Query: 40 MSFQDLQ-----------NGXXXXXXXXXXXXXQAVAAGIFQINTAVAAFRRLVDAIGTSKDTLDHRQKLHNTRQRILQLVKDTSAKLKSVSESDRDADVNQNKKVEDAKLARDFQTVLQEFQKIQQLASEREXXXXXXXXXXXXXXXXXXXXXXGDHVGSENQPFLMEQKRQELFLLDXXXXXXXXXXXXXXHGLREIE 606 MSFQDL+ G Q VAAGIF+I+TAV +F RLV++IGT KDTL+ R KL TR +I +LVK+TSAKLK SE+D +Q KK+ DAKLA+DFQ+VL+EFQK Q+LA+ERE S+ Q L++ +RQE+ LD G+REIE Sbjct: 1 MSFQDLEAGTRSPAPNRFTGGRQQRPSSRGDPSQEVAAGIFRISTAVNSFFRLVNSIGTPKDTLELRDKLQKTRLQISELVKNTSAKLKEASEADLHGSASQIKKIADAKLAKDFQSVLKEFQKAQRLAAEREITYTPVVTKEIPTSYNAPELDTESLRISQQQALLLQSRRQEVVFLDNEITFNEAIIEEREQGIREIE 200
BLAST of CX294739 vs. ExPASy Swiss-Prot
Match: SYP24_ARATH (Putative syntaxin-24 OS=Arabidopsis thaliana GN=SYP24 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.322e-15 Identity = 53/145 (36.55%), Postives = 73/145 (50.34%), Query Frame = 1 Query: 172 AIGTSKDTLDHRQKLHNTRQRILQLVKDTSAKLKSVSESDRDADVNQNKKVEDAKLARDFQTVLQEFQKIQQLASEREXXXXXXXXXXXXXXXXXXXXXXGDHVGSENQPFLMEQKRQELFLLDXXXXXXXXXXXXXXHGLREIE 606 A+G+S T H++ L I QLVKDTSA L+ SE+D DV Q+KK+ DAKLA+DF+ L+EFQK Q + ERE + S+ Q LME +RQE+ LLD G++E++ Sbjct: 144 ALGSSNSTGGHKKML-----LIGQLVKDTSANLREASETDHRRDVAQSKKIADAKLAKDFEAALKEFQKAQHITVERETSYIPFDPKGSFSSSEVDI----GYDRSQEQRVLMESRRQEIVLLDNEISLNEARIEAREQGIQEVK 279 The following BLAST results are available for this feature:
BLAST of CX294739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294739 ID=CX294739; Name=CX294739; organism=Citrus clementina; type=EST; length=606bpback to top |