CX294771

Overview
NameCX294771
Unique NameCX294771
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length649
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX294771 vs. ExPASy Swiss-Prot
Match: ATP7_ARATH (Probable ATP synthase 24 kDa subunit, mitochondrial OS=Arabidopsis thaliana GN=At2g21870 PE=1 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 8.504e-84
Identity = 157/216 (72.69%), Postives = 183/216 (84.72%), Query Frame = 1 
Query:    1 VILQRQHAISVRFFANEAAPQALKGDEMLKNIFLDVKKKFETALGVLRKEKITIAPEDPAAVSQYANVMKTVREKADLFSESQRIAYTIETRTAGIPDARTYLLTLKEIRERRGLIDEHGAEAMMMDALDKVEKEIKKPLMRNDKKGMALLTAEFDKINKKLGIRKEDLPKYEEQLELXIAKAQLEELKKDALEAMETXKKREEFKDEEMVEVKSL 648
            VILQ+QHAI VR FA EAA    KGDEMLK +F D+K KF+ A+ +LRKEKIT+ PEDPAAV QYANVMKT+R+KAD+FSESQRI + I+T T  IPDAR YLL L+EIR RRGL DE GAEAMM +AL+KVEK+IKKPL+R+DKKGM LL AEF+K NKKLGIRKEDLPKYEE LEL +AKAQL+ELK DA+EAME+ KK+EEF+DEEM +VKSL
Sbjct:   19 VILQQQHAIPVRAFAKEAARPTFKGDEMLKGVFFDIKNKFQAAVDILRKEKITLDPEDPAAVKQYANVMKTIRQKADMFSESQRIKHDIDTETQDIPDARAYLLKLQEIRTRRGLTDELGAEAMMFEALEKVEKDIKKPLLRSDKKGMDLLVAEFEKGNKKLGIRKEDLPKYEENLELSMAKAQLDELKSDAVEAMESQKKKEEFQDEEMPDVKSL 234
The following BLAST results are available for this feature:
BLAST of CX294771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ATP7_ARATH8.504e-8472.69Probable ATP synthase 24 kDa subunit, mitochondria... [more]
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Properties
Property NameValue
Genbank descriptionC05055G04SK FlavSen1 Citrus clementina cDNA clone C05055G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294771 ID=CX294771; Name=CX294771; organism=Citrus clementina; type=EST; length=649bp
GTGATACTGCAACGGCAGCATGCAATTTCAGTTCGTTTCTTTGCAAACGA
AGCTGCTCCTCAGGCTCTTAAAGGAGATGAGATGTTGAAAAACATCTTTT
TGGATGTTAAGAAGAAATTTGAGACTGCCTTGGGGGTACTCCGGAAGGAG
AAGATCACCATTGCTCCAGAGGATCCTGCTGCTGTTTCTCAGTATGCTAA
TGTCATGAAGACTGTCAGAGAGAAGGCAGACTTGTTCTCAGAATCCCAAC
GAATAGCGTATACCATTGAAACACGAACAGCAGGAATTCCAGATGCTCGA
ACATATTTGTTGACGCTCAAGGAAATAAGGGAGAGGAGAGGTCTCATTGA
TGAGCATGGTGCTGAGGCTATGATGATGGATGCATTGGATAAAGTTGAAA
AAGAAATTAAAAAGCCTCTTATGAGGAATGATAAGAAGGGGATGGCTCTT
CTTACAGCTGAGTTTGACAAGATTAATAAGAAGCTTGGGATCCGAAAGGA
GGATCTACCAAAGTATGAAGAACAGTTGGAACTCANAATTGCCAAAGCAC
AGTTGGAAGAATTGAAGAAGGATGCTCTTGAGGCCATGGAAACACANAAG
AAGAGAGAGGAATTCAAGGATGAAGAAATGGTCGAAGTGAAGTCCTTGG
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